Homologs of Atu6090 from Agrobacterium fabrum C58

ATP-dependent DNA ligase
SEED: ATP-dependent DNA ligase (EC 6.5.1.1) LigC

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Agrobacterium fabrum C58 Atu6090 ATP-dependent DNA ligase insig. 100 100
  Agrobacterium fabrum C58 Atu5097 ATP-dependent DNA ligase insig. 80 100
  Agrobacterium fabrum C58 Atu5051 ATP-dependent DNA ligase insig. 61 99
  Rhizobium sp. OAE497 ABIE40_RS27965 non-homologous end-joining DNA ligase insig. 58 99
  Sinorhizobium meliloti 1021 SMa0424 ATP-dependent DNA ligase insig. 58 98
  Bosea sp. OAE506 ABIE41_RS06590 non-homologous end-joining DNA ligase insig. 54 93
  Sinorhizobium meliloti 1021 SM_b20912 ATP-dependent DNA ligase insig. 49 87
  Bosea sp. OAE506 ABIE41_RS04575 DNA ligase D insig. 43 98
  Agrobacterium fabrum C58 Atu4632 ATP-dependent DNA ligase insig. 44 88
  Rhizobium sp. OAE497 ABIE40_RS26435 DNA ligase D insig. 43 88
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4314 ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD insig. 39 92
  Pseudomonas sp. DMC3 GFF1659 Multifunctional non-homologous end joining protein LigD cofit 38 94
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1216 ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD insig. 36 95
  Ralstonia solanacearum PSI07 RPSI07_RS21105 DNA ligase D insig. 41 87
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF111 ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD insig. 39 88
  Pseudomonas fluorescens SBW25 PFLU_RS14185 DNA ligase D insig. 38 88
  Pseudomonas fluorescens SBW25-INTG PFLU_RS14185 DNA ligase D insig. 38 88
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_06196 ATP-dependent DNA ligase LigD phosphoesterase module/ATP-dependent DNA ligase LigD polymerase module insig. 38 89
  Pseudomonas fluorescens FW300-N2C3 AO356_26950 ATP-dependent DNA ligase insig. 36 93
  Pseudomonas aeruginosa PA14 IKLFDK_10445 DNA ligase D sig. 41 87
  Pseudomonas aeruginosa MRSN321 DY961_RS16935 ligD;go_process=double-strand DNA ligase D insig. 41 87
  Pseudomonas aeruginosa PUPa3 DQ20_RS39205 ligD;go_process=double-strand DNA ligase D insig. 41 87
  Ralstonia sp. UNC404CL21Col ABZR87_RS08115 DNA ligase D insig. 38 86
  Xanthobacter sp. DMC5 GFF242 Multifunctional non-homologous end joining protein LigD insig. 39 89
  Pseudomonas putida KT2440 PP_3260 DNA ligase D insig. 38 92
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00864 ATP-dependent DNA ligase LigD phosphoesterase module/ATP-dependent DNA ligase LigD polymerase module insig. 39 86
  Cupriavidus basilensis FW507-4G11 RR42_RS37085 ATP-dependent DNA ligase insig. 37 88
  Burkholderia phytofirmans PsJN BPHYT_RS09215 ATP-dependent DNA ligase insig. 39 86
  Sphingobium sp. HT1-2 GFF5134 ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD cofit 38 87
  Pseudomonas sp. RS175 PFR28_02106 Multifunctional non-homologous end joining protein LigD insig. 36 89
  Pseudomonas simiae WCS417 PS417_13125 ATP-dependent DNA ligase insig. 37 88
  Paraburkholderia graminis OAS925 ABIE53_000212 bifunctional non-homologous end joining protein LigD insig. 37 90
  Pseudomonas lactucae CFBP13502 GEMAOFIL_03237 Multifunctional non-homologous end joining protein LigD cofit 37 88
  Paraburkholderia graminis OAS925 ABIE53_002080 bifunctional non-homologous end joining protein LigD insig. 37 86
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3858 DNA ligase D insig. 38 86
  Pseudomonas orientalis W4I3 QF045_RS16850 DNA ligase D insig. 37 86
  Pseudomonas sp. BP01 JOY50_RS26485 ligD DNA ligase D insig. 37 90
  Sinorhizobium meliloti 1021 SM_b20685 hypothetical protein insig. 39 86
  Sinorhizobium meliloti 1021 SMc03959 hypothetical protein insig. 38 87
  Pseudomonas stutzeri RCH2 Psest_2179 DNA ligase D insig. 37 86
  Herbaspirillum seropedicae SmR1 HSERO_RS11360 DNA ligase insig. 39 88
  Pseudomonas sp. S08-1 OH686_01425 DNA ligase D cofit 37 91
  Paraburkholderia sabiae LMG 24235 QEN71_RS22145 DNA ligase D insig. 36 86
  Bosea sp. OAE506 ABIE41_RS06605 DNA ligase D insig. 37 98
  Pseudomonas syringae pv. syringae B728a Psyr_3245 ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module insig. 36 89
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3245 ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module insig. 36 89
  Pseudomonas sp. RS175 PFR28_01701 Multifunctional non-homologous end joining protein LigD insig. 37 93
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_797 ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD insig. 36 86
  Variovorax sp. SCN45 GFF6242 ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD insig. 37 88
  Rhodopseudomonas palustris CGA009 TX73_018915 DNA ligase D insig. 40 86
  Pseudomonas fluorescens FW300-N2C3 AO356_27730 ATP-dependent DNA ligase insig. 38 86
  Agrobacterium fabrum C58 Atu5055 ATP-dependent DNA ligase insig. 36 92
  Sinorhizobium meliloti 1021 SM_b21044 ATP-dependent DNA ligase insig. 37 86
  Rhizobium sp. OAE497 ABIE40_RS28460 DNA ligase D insig. 36 88
  Rhizobium sp. OAE497 ABIE40_RS29525 DNA ligase D insig. 37 88
  Pseudomonas sp. SVBP6 COO64_RS24640 ligD DNA ligase D insig. 35 92
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.140.1 ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD insig. 36 92
  Sinorhizobium meliloti 1021 SMa0414 hypothetical protein insig. 39 73
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS15285 DNA ligase D insig. 32 89
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS02935 DNA ligase D insig. 36 88
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS10580 DNA ligase D insig. 34 85
  Mycobacterium tuberculosis H37Rv Rv0938 ATP dependent DNA ligase LigD (ATP dependent polydeoxyribonucleotide synthase) (thermostable DNA ligase) (ATP dependent polynucleotide ligase) (sealase) (DNA repair enzyme) (DNA joinase) insig. 34 83
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS20470 DNA ligase D insig. 32 99
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS06915 DNA ligase D insig. 29 88
  Lysobacter sp. OAE881 ABIE51_RS12760 DNA ligase D insig. 32 97
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01036 DNA ligase D, ligase domain-containing protein no data 36 67
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2247.1 ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD insig. 31 88
  Lysobacter sp. OAE881 ABIE51_RS03755 ATP-dependent DNA ligase insig. 33 73
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3656.1 ATP-dependent DNA ligase (EC 6.5.1.1) LigC insig. 32 74
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS04120 cisplatin damage response ATP-dependent DNA ligase insig. 30 66
  Mycobacterium tuberculosis H37Rv Rv3731 Possible ATP-dependent DNA ligase LigC (polydeoxyribonucleotide synthase [ATP]) (polynucleotide ligase [ATP]) (sealase) (DNA repair protein) (DNA joinase) insig. 31 73
  Variovorax sp. OAS795 ABID97_RS09860 RNA ligase family protein insig. 34 50
  Paraburkholderia sabiae LMG 24235 QEN71_RS43605 DNA ligase insig. 28 54
  Rhizobium sp. OAE497 ABIE40_RS29190 ATP-dependent DNA ligase insig. 31 86
  Alteromonas macleodii MIT1002 MIT1002_03768 Putative DNA ligase-like protein/MT0965 insig. 28 65
  Sinorhizobium meliloti 1021 SM_b20008 ATP-dependent DNA ligase insig. 28 88
  Ralstonia sp. UNC404CL21Col ABZR87_RS21355 ATP-dependent DNA ligase insig. 30 88
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3851 DNA ligase, ATP-dependent, PP_1105 family insig. 29 78
  Pseudomonas simiae WCS417 PS417_06420 ATP-dependent DNA ligase insig. 38 50
  Cellulophaga baltica 18 M666_RS06765 ATP-dependent DNA ligase insig. 30 50
  Rhizobium sp. OAE497 ABIE40_RS28530 ATP-dependent DNA ligase insig. 29 86
  Mycobacterium tuberculosis H37Rv Rv3062 Probable ATP-dependent DNA ligase LigB (polydeoxyribonucleotide synthase [ATP]) (polynucleotide ligase [ATP]) (sealase) (DNA repair protein) (DNA joinase) insig. 29 54
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS09095 ATP-dependent DNA ligase insig. 28 64
  Phaeobacter inhibens DSM 17395 PGA1_262p00500 putative ATP dependent DNA ligase insig. 27 79
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01454 DNA ligase cofit 37 50
  Variovorax sp. SCN45 GFF3697 ATP-dependent DNA ligase (EC 6.5.1.1) LigC insig. 29 77
  Sphingobium sp. HT1-2 GFF105 ATP-dependent DNA ligase (EC 6.5.1.1) LigC cofit 28 83
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS21575 ATP-dependent DNA ligase insig. 26 89
  Variovorax sp. OAS795 ABID97_RS00390 ATP-dependent DNA ligase insig. 28 77
  Pseudomonas fluorescens SBW25 PFLU_RS06485 ATP-dependent DNA ligase insig. 36 50
  Pseudomonas fluorescens SBW25-INTG PFLU_RS06485 ATP-dependent DNA ligase insig. 36 50
  Methanococcus maripaludis S2 MMP_RS05025 ATP-dependent DNA ligase no data 23 90
  Azospirillum brasilense Sp245 AZOBR_RS09960 ATP-dependent DNA ligase insig. 27 75
  Caulobacter crescentus NA1000 CCNA_03725 ATP-dependent DNA ligase cofit 29 79
  Caulobacter crescentus NA1000 Δfur CCNA_03725 ATP-dependent DNA ligase cofit 29 79
  Pseudomonas sp. BP01 JOY50_RS24060 ATP-dependent DNA ligase insig. 31 52
  Azospirillum sp. SherDot2 MPMX19_02215 DNA ligase insig. 27 74
  Herbaspirillum seropedicae SmR1 HSERO_RS11395 ATP-dependent DNA ligase insig. 30 76
  Sinorhizobium meliloti 1021 SMc03177 ATP-dependent DNA ligase insig. 28 64
  Pseudomonas fluorescens FW300-N2C3 AO356_05490 ATP-dependent DNA ligase insig. 29 76