| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_24810 | | transcriptional regulator | insig. | 100 | 100 |
| o | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3214 | | probable two-component response regulator | insig. | 95 | 100 |
| o | Pseudomonas sp. SVBP6 | COO64_RS21035 | | response regulator | insig. | 90 | 100 |
| o | Pseudomonas sp. BP01 | JOY50_RS08135 | | response regulator | insig. | 87 | 100 |
| o | Pseudomonas putida KT2440 | PP_3730 | | Transcriptional regulatory protein AruR | insig. | 86 | 100 |
| o | Pseudomonas aeruginosa PA14 | IKLFDK_28620 | | Transcriptional regulatory protein AruR | sig. | 79 | 100 |
| o | Pseudomonas aeruginosa MRSN321 | DY961_RS10715 | aruR;inference=COORDINATES | two-component system response regulator AruR | sig. | 79 | 100 |
| o | Pseudomonas aeruginosa PUPa3 | DQ20_RS51345 | aruR;inference=COORDINATES | two-component system response regulator AruR | sig. | 79 | 100 |
| o | Rhodospirillum rubrum S1H | Rru_A1282 | | Two component Transcriptional regulator, Winged helix family (NCBI) | insig. | 52 | 97 |
| o | Azospirillum sp. SherDot2 | MPMX19_05849 | | TorCAD operon transcriptional regulatory protein TorR | insig. | 48 | 99 |
| o | Alteromonas macleodii MIT1002 | MIT1002_00233 | | Dye resistance protein | strong | 44 | 99 |
| o | Vibrio cholerae E7946 ATCC 55056 | CSW01_08645 | | two-component system response regulator TorR | insig. | 46 | 98 |
| o | Lysobacter sp. OAE881 | ABIE51_RS14390 | | response regulator | insig. | 47 | 97 |
| o | Shewanella sp. ANA-3 | Shewana3_1051 | | DNA-binding transcriptional regulator TorR (RefSeq) | insig. | 49 | 99 |
| | Azospirillum brasilense Sp245 | AZOBR_RS30925 | | transcriptional regulator | no data | 47 | 97 |
| | Azospirillum sp. SherDot2 | MPMX19_00268 | | Transcriptional regulatory protein OmpR | insig. | 47 | 97 |
| o | Shewanella oneidensis MR-1 | SO1228 | torR | torcad operon transcriptional regulatory protein TorR (NCBI ptt file) | insig. | 48 | 99 |
| o | Shewanella amazonensis SB2B | Sama_0983 | | DNA-binding transcriptional regulator TorR (RefSeq) | insig. | 49 | 99 |
| | Azospirillum sp. SherDot2 | MPMX19_06015 | | Aerobic respiration control protein ArcA | insig. | 50 | 97 |
| o | Shewanella loihica PV-4 | Shew_2803 | | DNA-binding transcriptional regulator TorR (RefSeq) | insig. | 48 | 99 |
| | Variovorax sp. SCN45 | GFF6945 | | Two-component transcriptional response regulator, OmpR family | sig. | 43 | 99 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_1631 | | two component transcriptional regulator, winged helix family (RefSeq) | insig. | 46 | 97 |
| | Sinorhizobium meliloti 1021 | SM_b20219 | | response regulator protein | insig. | 46 | 97 |
| | Marinobacter adhaerens HP15 | HP15_3961 | | two-component transcriptional regulator, winged helix family | strong | 48 | 99 |
| | Xanthobacter sp. DMC5 | GFF2161 | | Transcriptional regulatory protein OmpR | insig. | 47 | 98 |
| | Azospirillum sp. SherDot2 | MPMX19_04053 | | Transcriptional regulatory protein OmpR | insig. | 44 | 99 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS27980 | bfmR;inference=COORDINATES | two-component system response regulator BfmR | insig. | 46 | 97 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS47655 | bfmR;inference=COORDINATES | two-component system response regulator BfmR | insig. | 46 | 97 |
| | Azospirillum brasilense Sp245 | AZOBR_RS00555 | | chemotaxis protein CheY | insig. | 45 | 99 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_2032 | | two component transcriptional regulator, winged helix family | insig. | 46 | 97 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_2032 | | two component transcriptional regulator, winged helix family | insig. | 46 | 97 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_0871 | | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | insig. | 44 | 98 |
| | Sphingobium sp. HT1-2 | GFF3699 | | DNA-binding response regulator GltR, controls specific porins for the entry of glucose | cofit | 47 | 98 |
| | Pseudomonas sp. DMC3 | GFF1652 | | Transcriptional regulatory protein OmpR | no data | 46 | 97 |
| o | Dinoroseobacter shibae DFL-12 | Dshi_2279 | | two component transcriptional regulator, winged helix family (RefSeq) | insig. | 46 | 100 |
| | Xanthobacter sp. DMC5 | GFF2106 | | Transcriptional regulatory protein OmpR | insig. | 45 | 97 |
| | Marinobacter adhaerens HP15 | HP15_2961 | | two component transcriptional regulator, winged helix family | insig. | 45 | 97 |
| | Xanthobacter sp. DMC5 | GFF4916 | | Transcriptional regulatory protein OmpR | insig. | 45 | 98 |
| | Pantoea sp. MT58 | IAI47_19355 | | response regulator | insig. | 44 | 97 |
| | Bosea sp. OAE506 | ABIE41_RS15475 | | response regulator | insig. | 43 | 97 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS16915 | | DNA-binding response regulator | insig. | 46 | 98 |
| | Azospirillum sp. SherDot2 | MPMX19_00010 | | Transcriptional regulatory protein OmpR | insig. | 45 | 99 |
| o | Escherichia coli BL21 | ECD_00998 | | response regulator in two-component regulatory system with TorS | insig. | 45 | 100 |
| o | Escherichia coli ECOR38 | HEPCGN_23435 | torR | two-component system response regulator TorR | insig. | 45 | 100 |
| o | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_02672 | | TorCAD operon transcriptional regulatory protein TorR | insig. | 45 | 100 |
| o | Escherichia coli BW25113 | b0995 | torR | DNA-binding response regulator in two-component regulatory system with TorS (NCBI) | insig. | 45 | 100 |
| | Pseudomonas sp. BP01 | JOY50_RS10570 | | response regulator | insig. | 44 | 97 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS21900 | | transcriptional regulator | insig. | 44 | 97 |
| o | Escherichia coli ECRC100 | OKFHMN_04710 | torR | two-component system response regulator TorR | insig. | 45 | 100 |
| o | Escherichia coli ECRC101 | MCAODC_24095 | torR | two-component system response regulator TorR | insig. | 45 | 100 |
| o | Escherichia coli ECRC102 | NIAGMN_23140 | torR | two-component system response regulator TorR | cofit | 45 | 100 |
| o | Escherichia coli ECRC98 | JDDGAC_08320 | torR | two-component system response regulator TorR | insig. | 45 | 100 |
| o | Escherichia coli ECRC99 | KEDOAH_23035 | torR | two-component system response regulator TorR | no data | 45 | 100 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS09105 | | response regulator transcription factor | insig. | 46 | 97 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS09105 | | response regulator transcription factor | insig. | 46 | 97 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_12000 | | two-component system response regulator ArcA | no data | 40 | 99 |
| o | Escherichia fergusonii Becca | EFB2_03084 | | TorCAD operon transcriptional regulatory protein TorR | insig. | 45 | 100 |
| o | Escherichia coli ECOR27 | NOLOHH_21600 | torR | two-component system response regulator TorR | insig. | 45 | 100 |
| o | Escherichia coli ECRC62 | BNILDI_19765 | torR | two-component system response regulator TorR | insig. | 45 | 100 |
| o | Escherichia coli Nissle 1917 | ECOLIN_RS05195 | | two-component system response regulator TorR | no data | 45 | 100 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_1185 | | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | insig. | 46 | 98 |
| | Pseudomonas sp. RS175 | PFR28_03065 | | Transcriptional regulatory protein OmpR | insig. | 45 | 97 |
| o | Klebsiella michiganensis M5al | BWI76_RS04230 | | DNA-binding response regulator | no data | 39 | 99 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_515 | | DNA-binding response regulator GltR, controls specific porins for the entry of glucose | insig. | 46 | 97 |
| | Pseudomonas sp. SVBP6 | COO64_RS10890 | | response regulator | insig. | 45 | 97 |
| | Pseudomonas simiae WCS417 | PS417_10375 | | chemotaxis protein CheY | no data | 45 | 97 |
| | Pseudomonas simiae WCS417 | PS417_09050 | | transcriptional regulator | insig. | 45 | 97 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS20040 | | transcriptional regulator | insig. | 44 | 98 |
| | Azospirillum sp. SherDot2 | MPMX19_03222 | | Transcriptional regulatory protein OmpR | no data | 45 | 97 |
| | Pseudomonas sp. RS175 | PFR28_01763 | | Transcriptional regulatory protein OmpR | insig. | 45 | 97 |
| | Pseudomonas putida KT2440 | PP_2403 | | Chemotaxis protein CheY | insig. | 44 | 97 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_01675 | | transcriptional regulator | insig. | 47 | 97 |
| | Pseudomonas orientalis W4I3 | QF045_RS11740 | | response regulator transcription factor | cofit | 45 | 97 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_19845 | | transcriptional regulator | insig. | 45 | 98 |
| | Pseudomonas orientalis W4I3 | QF045_RS16280 | | response regulator | insig. | 45 | 97 |
| | Enterobacter sp. TBS_079 | MPMX20_02281 | | Transcriptional regulatory protein OmpR | insig. | 45 | 98 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03071 | | two-component system, OmpR family, response regulator | no data | 44 | 98 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4300 | | Transcriptional regulatory protein ompR | no data | 44 | 97 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS22725 | | transcriptional regulator | strong | 44 | 100 |
| o | Klebsiella pneumoniae MKP103 | KDGMDA_12495 | | two-component system response regulator ArcA | no data | 39 | 99 |
| o | Serratia liquefaciens MT49 | IAI46_03015 | | two-component system response regulator ArcA | strong | 39 | 99 |
| | Xanthobacter sp. DMC5 | GFF4014 | | Transcriptional regulatory protein OmpR | no data | 45 | 99 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS22860 | | chemotaxis protein CheY | insig. | 45 | 98 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS17815 | | response regulator | insig. | 45 | 97 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS17815 | | response regulator | sig. | 45 | 97 |
| | Methylophilus sp. DMC18 | GFF2713 | | Transcriptional regulatory protein OmpR | no data | 44 | 96 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS07635 | | transcriptional regulator | insig. | 43 | 98 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF2307 | | Phosphate regulon transcriptional regulatory protein PhoB (SphR) | insig. | 41 | 98 |
| | Variovorax sp. OAS795 | ABID97_RS16175 | | response regulator transcription factor | insig. | 41 | 98 |
| | Pseudomonas sp. S08-1 | OH686_23175 | | Two-component transcriptional response regulator, OmpR family | cofit | 45 | 97 |
| | Rhizobium sp. OAE497 | ABIE40_RS24305 | | response regulator | insig. | 43 | 97 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_3611 | | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | insig. | 40 | 99 |
| | Enterobacter sp. TBS_079 | MPMX20_00708 | | Aerobic respiration control protein ArcA | strong | 40 | 99 |
| | Shewanella amazonensis SB2B | Sama_0601 | | two-component response regulator (RefSeq) | no data | 40 | 98 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_24850 | | chemotaxis protein CheY | insig. | 45 | 97 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_659 | | Transcriptional regulatory protein ompR | insig. | 45 | 97 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS16955 | | response regulator | insig. | 43 | 97 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_03050 | | Transcriptional regulatory protein OmpR | cofit | 44 | 97 |
| o | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF1076 | | Aerobic respiration control protein arcA | strong | 40 | 99 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_01939 | | Transcriptional regulatory protein OmpR | cofit | 46 | 97 |