Homologs of AMB_RS03890 from Magnetospirillum magneticum AMB-1

GGDEF domain-containing protein
SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
KEGG: diguanylate cyclase

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Magnetospirillum magneticum AMB-1 AMB_RS03890 GGDEF domain-containing protein insig. 100 100
o Azospirillum brasilense Sp245 AZOBR_RS09565 diguanylate cyclase insig. 44 97
o Azospirillum sp. SherDot2 MPMX19_00642 Diguanylate cyclase VdcA insig. 44 97
o Rhodopseudomonas palustris CGA009 TX73_012800 GGDEF domain-containing protein insig. 40 94
o Shewanella sp. ANA-3 Shewana3_2227 diguanylate cyclase (RefSeq) insig. 39 96
o Shewanella oneidensis MR-1 SO2049 GGDEF family protein (NCBI ptt file) insig. 39 89
o Caulobacter crescentus NA1000 CCNA_01926 GGDEF diguanylate cyclase DgcB strong 37 96
o Caulobacter crescentus NA1000 Δfur CCNA_01926 GGDEF diguanylate cyclase DgcB cofit 37 96
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS04610 GGDEF domain-containing protein insig. 40 94
o Shewanella loihica PV-4 Shew_2040 diguanylate cyclase (RefSeq) no data 37 94
o Shewanella amazonensis SB2B Sama_1759 GGDEF domain-containing protein (RefSeq) insig. 36 95
o Bosea sp. OAE506 ABIE41_RS16935 GGDEF domain-containing protein insig. 36 95
  Rhodopseudomonas palustris CGA009 TX73_008440 diguanylate cyclase insig. 35 88
o Pseudomonas sp. S08-1 OH686_19100 hypothetical protein cofit 35 99
  Shewanella sp. ANA-3 Shewana3_2408 diguanylate cyclase (RefSeq) insig. 32 95
  Shewanella oneidensis MR-1 SO2197 GGDEF family protein (NCBI ptt file) insig. 32 95
o Vibrio cholerae E7946 ATCC 55056 CSW01_18905 GGDEF domain-containing protein cofit 31 92
  Shewanella loihica PV-4 Shew_1795 diguanylate cyclase (RefSeq) no data 32 95
  Shewanella amazonensis SB2B Sama_2001 GGDEF family protein (RefSeq) insig. 30 95
o Agrobacterium fabrum C58 Atu1691 GGDEF family protein insig. 33 93
  Acidovorax sp. GW101-3H11 Ac3H11_3285 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) sig. 47 54
  Shewanella oneidensis MR-1 SO4407 GGDEF family protein (NCBI ptt file) insig. 41 54
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1740.1 response regulator insig. 46 47
  Rhodanobacter sp. FW510-T8 OKGIIK_09270 Diguanylate cyclase insig. 46 47
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3970 Two-component response regulator insig. 45 49
o Rhizobium sp. OAE497 ABIE40_RS10555 sensor domain-containing diguanylate cyclase insig. 33 93
  Pseudomonas sp. S08-1 OH686_12185 GGDEF domain protein cofit 35 80
  Shewanella loihica PV-4 Shew_3023 diguanylate cyclase (RefSeq) insig. 45 48
  Rhizobium sp. OAE497 ABIE40_RS07330 PleD family two-component system response regulator cofit 47 49
  Pseudomonas fluorescens FW300-N2C3 AO356_01855 diguanylate cyclase insig. 41 59
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3651.1 Sensor histidine kinase insig. 45 49
  Shewanella sp. ANA-3 Shewana3_0269 diguanylate cyclase (RefSeq) cofit 43 46
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2239 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 40 59
  Pseudomonas putida KT2440 PP_3348 GGDEF domain protein sig. 36 76
  Paraburkholderia sabiae LMG 24235 QEN71_RS32265 diguanylate cyclase insig. 48 47
  Pseudomonas stutzeri RCH2 Psest_0767 diguanylate cyclase (GGDEF) domain sig. 43 53
  Rhodopseudomonas palustris CGA009 TX73_008830 diguanylate cyclase insig. 40 54
  Caulobacter crescentus NA1000 CCNA_02546 GGDEF/response regulator protein PleD strong 45 49
  Caulobacter crescentus NA1000 Δfur CCNA_02546 GGDEF/response regulator protein PleD cofit 45 49
  Azospirillum sp. SherDot2 MPMX19_02025 Protein-glutamate methylesterase/protein-glutamine glutaminase insig. 41 50
  Paraburkholderia sabiae LMG 24235 QEN71_RS43240 sensor domain-containing diguanylate cyclase insig. 47 45
  Shewanella amazonensis SB2B Sama_2871 response regulator (RefSeq) insig. 44 49
  Azospirillum brasilense Sp245 AZOBR_RS03050 diguanylate cyclase sig. 43 50
  Shewanella oneidensis MR-1 SO4457 GGDEF domain protein (NCBI ptt file) insig. 43 46
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_40 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 43 49
  Burkholderia phytofirmans PsJN BPHYT_RS34775 diguanylate cyclase insig. 42 47
  Kangiella aquimarina DSM 16071 B158DRAFT_0300 diguanylate cyclase (GGDEF) domain insig. 41 48
  Pseudomonas sp. RS175 PFR28_01205 hypothetical protein insig. 41 52
  Desulfovibrio vulgaris Hildenborough JW710 DVU1805 GGDEF domain protein (TIGR) insig. 46 47
  Pseudomonas syringae pv. syringae B728a Psyr_1157 diguanylate cyclase with PAS/PAC sensor insig. 43 46
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1157 diguanylate cyclase with PAS/PAC sensor insig. 43 46
  Paraburkholderia sabiae LMG 24235 QEN71_RS31465 diguanylate cyclase insig. 42 50
  Shewanella sp. ANA-3 Shewana3_1212 diguanylate cyclase (RefSeq) insig. 37 55
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01602 diguanylate cyclase (GGDEF) domain-containing protein insig. 45 47
  Synechococcus elongatus PCC 7942 Synpcc7942_2096 diguanylate cyclase with GAF sensor insig. 42 55
  Marinobacter adhaerens HP15 HP15_3763 response regulator receiver domain protein (CheY) insig. 40 58
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0300 diguanylate cyclase (GGDEF) domain insig. 45 50
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3367.1 GGDEF family protein insig. 44 54
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03607 PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein insig. 42 47
  Pseudomonas fluorescens FW300-N2E3 AO353_20465 diguanylate cyclase cofit 41 49
  Shewanella amazonensis SB2B Sama_3210 GGDEF domain-containing protein (RefSeq) strong 39 58
  Rhodanobacter denitrificans MT42 LRK55_RS01975 GGDEF domain-containing protein insig. 46 47
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS02220 GGDEF domain-containing protein insig. 46 47
  Azospirillum sp. SherDot2 MPMX19_06692 hypothetical protein insig. 43 47
  Marinobacter adhaerens HP15 HP15_4072 diguanylate cyclase with PAS/PAC sensor insig. 40 56
  Pseudomonas syringae pv. syringae B728a Psyr_3328 GGDEF domain protein insig. 39 59
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3328 GGDEF domain protein insig. 39 59
  Escherichia fergusonii Becca EFB2_02587 Diguanylate cyclase DgcM insig. 39 63
  Escherichia coli Nissle 1917 ECOLIN_RS08045 diguanylate cyclase DgcM no data 39 63
  Acidovorax sp. GW101-3H11 Ac3H11_3597 hypothetical protein insig. 36 70
  Dechlorosoma suillum PS Dsui_0789 diguanylate cyclase (GGDEF) domain-containing protein insig. 41 54
  Acidovorax sp. GW101-3H11 Ac3H11_1782 Putative diheme cytochrome c-553 insig. 30 80
  Pseudomonas fluorescens SBW25 PFLU_RS00925 sensor domain-containing diguanylate cyclase insig. 47 47
  Pseudomonas fluorescens SBW25-INTG PFLU_RS00925 sensor domain-containing diguanylate cyclase sig. 47 47
  Rhizobium sp. OAE497 ABIE40_RS04125 diguanylate cyclase insig. 43 49
  Escherichia coli BL21 ECD_01318 diguanylate cyclase, csgD regulator insig. 39 63
  Escherichia coli ECOR27 NOLOHH_19900 dgcM diguanylate cyclase DgcM no data 39 63
  Escherichia coli ECOR38 HEPCGN_25975 dgcM diguanylate cyclase DgcM cofit 39 63
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02341 Diguanylate cyclase DgcM insig. 39 63
  Escherichia coli BW25113 b1341 b1341 orf, hypothetical protein (VIMSS) strong 39 63
  Pseudomonas simiae WCS417 PS417_00910 diguanylate cyclase insig. 47 47
  Pseudomonas sp. RS175 PFR28_03580 hypothetical protein insig. 46 47
  Pseudomonas fluorescens GW456-L13 PfGW456L13_492 Sensory box/GGDEF family protein insig. 43 47
  Paraburkholderia graminis OAS925 ABIE53_004409 diguanylate cyclase (GGDEF)-like protein sig. 40 59
  Escherichia coli ECRC101 OKFHMN_02185 dgcM diguanylate cyclase DgcM insig. 39 63
  Escherichia coli ECRC101 MCAODC_16070 dgcM diguanylate cyclase DgcM insig. 39 63
  Escherichia coli ECRC102 NIAGMN_26355 dgcM diguanylate cyclase DgcM insig. 39 63
  Escherichia coli ECRC98 JDDGAC_04745 dgcM diguanylate cyclase DgcM no data 39 63
  Escherichia coli ECRC99 KEDOAH_26570 dgcM diguanylate cyclase DgcM no data 39 63
  Shewanella oneidensis MR-1 SO4207 GGDEF domain protein (NCBI ptt file) strong 38 56
  Escherichia coli ECRC62 BNILDI_18050 dgcM diguanylate cyclase DgcM insig. 38 63
  Paraburkholderia graminis OAS925 ABIE53_004284 diguanylate cyclase (GGDEF)-like protein insig. 47 47
  Burkholderia phytofirmans PsJN BPHYT_RS25280 diguanylate cyclase insig. 48 47
  Pseudomonas syringae pv. syringae B728a Psyr_1125 GGDEF domain protein insig. 43 48
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1125 GGDEF domain protein insig. 43 48
  Pseudomonas sp. RS175 PFR28_04758 hypothetical protein insig. 43 47
  Enterobacter sp. TBS_079 MPMX20_01827 hypothetical protein cofit 41 47
  Desulfovibrio vulgaris Miyazaki F DvMF_1014 diguanylate cyclase (RefSeq) insig. 38 59
  Paraburkholderia sabiae LMG 24235 QEN71_RS28550 diguanylate cyclase insig. 47 46
  Desulfovibrio vulgaris Miyazaki F DvMF_1477 diguanylate cyclase with PAS/PAC sensor (RefSeq) sig. 44 49