Homologs of Shew_3007 from Shewanella loihica PV-4

LysR family transcriptional regulator (RefSeq)
SEED: Predicted lactate-responsive transcriptional regulator of ykgEFG LDH gene cluster, LysR-type

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella loihica PV-4 Shew_3007 LysR family transcriptional regulator (RefSeq) strong 100 100
o Shewanella sp. ANA-3 Shewana3_1106 LysR family transcriptional regulator (RefSeq) strong 68 100
o Shewanella oneidensis MR-1 SO3460 transcriptional regulator, LysR family (NCBI ptt file) strong 68 100
o Shewanella amazonensis SB2B Sama_1028 LysR family transcriptional regulator (RefSeq) strong 61 100
o Vibrio cholerae E7946 ATCC 55056 CSW01_05340 LysR family transcriptional regulator cofit 32 95
  Vibrio cholerae E7946 ATCC 55056 CSW01_19380 LysR family transcriptional regulator insig. 35 93
  Ralstonia solanacearum PSI07 RPSI07_RS03455 LysR family transcriptional regulator insig. 33 94
  Shewanella sp. ANA-3 Shewana3_2722 LysR family transcriptional regulator (RefSeq) insig. 33 95
  Shewanella amazonensis SB2B Sama_3549 LyrR family transcriptional regulator (RefSeq) insig. 31 96
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS13340 LysR family transcriptional regulator insig. 34 94
  Ralstonia solanacearum UW163 UW163_RS00230 LysR family transcriptional regulator insig. 34 94
  Shewanella amazonensis SB2B Sama_0401 LysR family transcriptional regulator (RefSeq) strong 33 95
  Herbaspirillum seropedicae SmR1 HSERO_RS10630 LysR family transcriptional regulator insig. 33 96
  Ralstonia sp. UNC404CL21Col ABZR87_RS19415 LysR family transcriptional regulator insig. 32 94
  Sinorhizobium meliloti 1021 SMa1602 LysR family transcriptional regulator insig. 33 94
  Ralstonia solanacearum GMI1000 RS_RS19305 LysR family transcriptional regulator insig. 32 94
  Methylophilus sp. DMC18 GFF2123 HTH-type transcriptional regulator PgrR insig. 31 95
  Cupriavidus basilensis FW507-4G11 RR42_RS09305 LysR family transcriptional regulator insig. 32 93
  Ralstonia sp. UNC404CL21Col ABZR87_RS20720 LysR family transcriptional regulator insig. 31 94
  Variovorax sp. OAS795 ABID97_RS03060 LysR substrate-binding domain-containing protein insig. 32 95
  Shewanella loihica PV-4 Shew_3407 LysR family transcriptional regulator (RefSeq) insig. 31 95
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS04035 LysR substrate-binding domain-containing protein insig. 31 96
  Azospirillum sp. SherDot2 MPMX19_04668 HTH-type transcriptional regulator DmlR insig. 32 96
  Pseudomonas stutzeri RCH2 Psest_3003 Transcriptional regulator sig. 31 95
  Pseudomonas fluorescens FW300-N2C3 AO356_22390 LysR family transcriptional regulator insig. 32 95
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_348 Transcriptional regulator, LysR family insig. 32 95
  Pseudomonas syringae pv. syringae B728a Psyr_2951 transcriptional regulator, LysR family insig. 31 94
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2951 transcriptional regulator, LysR family insig. 31 94
  Paraburkholderia graminis OAS925 ABIE53_006445 LysR family transcriptional regulator for bpeEF and oprC insig. 31 94
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_06580 DNA-binding transcriptional regulator, LysR family insig. 34 95
  Pseudomonas simiae WCS417 PS417_21920 transcriptional regulator insig. 33 95
  Pseudomonas sp. SVBP6 COO64_RS07860 LysR family transcriptional regulator insig. 31 94
  Pseudomonas aeruginosa PA14 IKLFDK_21520 LysR family transcriptional regulator insig. 32 93
  Pseudomonas sp. DMC3 GFF1175 HTH-type transcriptional regulator DmlR cofit 31 97
  Pseudomonas simiae WCS417 PS417_23625 LysR family transcriptional regulator insig. 31 94
  Rhodanobacter denitrificans MT42 LRK55_RS12490 LysR family transcriptional regulator insig. 31 92
  Pseudomonas sp. RS175 PFR28_02560 HTH-type transcriptional regulator PgrR insig. 31 95
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4707.1 Transcriptional regulator, LysR family insig. 30 95
  Variovorax sp. SCN45 GFF432 Probable transcription regulator protein of MDR efflux pump cluster insig. 29 94
  Shewanella sp. ANA-3 Shewana3_0521 LysR family transcriptional regulator (RefSeq) insig. 31 95
  Rahnella sp. WP5 EX31_RS03095 LysR family transcriptional regulator insig. 31 93
  Lysobacter sp. OAE881 ABIE51_RS01040 LysR family transcriptional regulator insig. 31 98
  Variovorax sp. OAS795 ABID97_RS00735 LysR family transcriptional regulator strong 31 95
  Variovorax sp. OAS795 ABID97_RS17365 LysR family transcriptional regulator insig. 29 94
  Escherichia fergusonii Becca EFB2_00287 HTH-type transcriptional regulator DmlR insig. 30 95
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00056 transcriptional regulator, LysR family no data 32 97
  Pseudomonas fluorescens FW300-N2E3 AO353_05905 LysR family transcriptional regulator insig. 30 94
  Paraburkholderia graminis OAS925 ABIE53_001472 DNA-binding transcriptional LysR family regulator insig. 31 96
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00181 HTH-type transcriptional regulator DmlR insig. 30 95
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3445 Transcriptional regulator, LysR family insig. 30 94
  Paraburkholderia sabiae LMG 24235 QEN71_RS20090 LysR family transcriptional regulator insig. 30 95
  Pseudomonas sp. BP01 JOY50_RS07845 LysR family transcriptional regulator no data 29 94
  Rahnella sp. WP5 EX31_RS05400 LysR family transcriptional regulator insig. 27 97
  Acidovorax sp. GW101-3H11 Ac3H11_2376 Transcriptional regulator, LysR family insig. 32 93
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS08130 LysR family transcriptional regulator insig. 31 95
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS15810 LysR family transcriptional regulator insig. 30 92
  Sinorhizobium meliloti 1021 SMc00831 transcriptional regulator insig. 32 95
  Pseudomonas fluorescens FW300-N2C3 AO356_07805 LysR family transcriptional regulator insig. 30 94
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.52.1 transcriptional regulator lysR family insig. 32 97
  Rhodanobacter denitrificans MT42 LRK55_RS07880 LysR family transcriptional regulator cofit 31 95
  Pseudomonas sp. DMC3 GFF2976 HTH-type transcriptional regulator PgrR insig. 30 95
  Pseudomonas fluorescens GW456-L13 PfGW456L13_5137 Transcriptional regulator, LysR family insig. 30 94
  Escherichia coli Nissle 1917 ECOLIN_RS20140 LysR family transcriptional regulator insig. 29 95
  Variovorax sp. SCN45 GFF137 Transcriptional regulator PA4174, LysR family insig. 29 95
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS12790 LysR family transcriptional regulator insig. 31 92
  Shewanella oneidensis MR-1 SO0523 transcriptional regulator, LysR family (NCBI ptt file) insig. 31 95
  Pseudomonas fluorescens FW300-N2E3 AO353_03180 transcriptional regulator insig. 30 95
  Escherichia coli ECOR38 HEPCGN_15135 yhjC Uncharacterized HTH-type transcriptional regulator YhjC insig. 30 95
  Escherichia coli ECRC100 OKFHMN_16230 yhjC Uncharacterized HTH-type transcriptional regulator YhjC cofit 30 95
  Escherichia coli ECRC101 MCAODC_06745 yhjC Uncharacterized HTH-type transcriptional regulator YhjC insig. 30 95
  Escherichia coli ECRC102 NIAGMN_13995 yhjC Uncharacterized HTH-type transcriptional regulator YhjC insig. 30 95
  Escherichia coli ECRC98 JDDGAC_19860 yhjC Uncharacterized HTH-type transcriptional regulator YhjC insig. 30 95
  Escherichia coli ECRC99 KEDOAH_11915 yhjC Uncharacterized HTH-type transcriptional regulator YhjC no data 30 95
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1938 Transcriptional regulator, LysR family insig. 29 95
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS18390 LysR family transcriptional regulator strong 29 95
  Ralstonia solanacearum UW163 UW163_RS20740 LysR family transcriptional regulator insig. 29 95
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS15410 LysR family transcriptional regulator cofit 31 94
  Methylophilus sp. DMC18 GFF2116 HTH-type transcriptional regulator PgrR insig. 31 93
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05378 transcriptional regulator, LysR family insig. 31 93
  Burkholderia phytofirmans PsJN BPHYT_RS24465 LysR family transcriptional regulator insig. 30 94
  Pseudomonas sp. DMC3 GFF4908 HTH-type transcriptional regulator PgrR cofit 30 96
  Escherichia coli BL21 ECD_03369 LysR family putative transcriptional regulator insig. 30 95
  Castellaniella sp019104865 MT123 ABCV34_RS10455 LysR family transcriptional regulator insig. 32 94
  Escherichia coli ECOR27 NOLOHH_08195 yhjC Uncharacterized HTH-type transcriptional regulator YhjC cofit 30 95
  Escherichia coli ECRC62 BNILDI_03360 yhjC Uncharacterized HTH-type transcriptional regulator YhjC cofit 30 95
  Pseudomonas aeruginosa PA14 IKLFDK_16380 HTH-type transcriptional repressor PA14_22550 insig. 30 95
  Ralstonia solanacearum GMI1000 RS_RS16695 LysR family transcriptional regulator insig. 33 90
  Variovorax sp. SCN45 GFF3618 Transcriptional regulator, LysR family cofit 31 95
  Pseudomonas putida KT2440 PP_2502 Transcriptional regulator, LysR family insig. 31 94
  Variovorax sp. OAS795 ABID97_RS28680 LysR family transcriptional regulator insig. 30 95
  Pseudomonas sp. RS175 PFR28_00026 HTH-type transcriptional regulator DmlR insig. 30 94
  Pseudomonas sp. S08-1 OH686_18470 Transcriptional regulator, LysR family insig. 32 93
  Herbaspirillum seropedicae SmR1 HSERO_RS13100 LysR family transcriptional regulator sig. 31 95
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4646.1 Transcriptional regulator, LysR family insig. 30 94
  Azospirillum sp. SherDot2 MPMX19_03275 HTH-type transcriptional regulator PgrR insig. 30 93
  Variovorax sp. SCN45 GFF7142 Transcriptional regulator, LysR family insig. 29 96
  Escherichia coli BW25113 b3521 yhjC predicted DNA-binding transcriptional regulator (RefSeq) insig. 29 95
  Paraburkholderia graminis OAS925 ABIE53_006193 DNA-binding transcriptional LysR family regulator insig. 27 93
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS08880 LysR family transcriptional regulator insig. 32 96
  Ralstonia solanacearum UW163 UW163_RS04730 LysR family transcriptional regulator insig. 32 96