Homologs of SO3689 from Shewanella oneidensis MR-1

sigma-54 dependent nitrogen response regulator (NCBI ptt file)

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella oneidensis MR-1 SO3689 sigma-54 dependent nitrogen response regulator (NCBI ptt file) sig. 100 100
o Shewanella sp. ANA-3 Shewana3_3257 two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) insig. 89 100
o Shewanella loihica PV-4 Shew_0726 two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) insig. 72 100
o Shewanella amazonensis SB2B Sama_2861 response regulator receiver protein (RefSeq) insig. 68 100
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS10560 sigma-54 dependent transcriptional regulator insig. 56 100
o Rhodanobacter sp. FW510-T8 OKGIIK_11280 atoC sigma-54-dependent Fis family transcriptional regulator insig. 56 100
o Rhodanobacter denitrificans MT42 LRK55_RS04170 sigma-54 dependent transcriptional regulator insig. 56 99
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS04395 sigma-54 dependent transcriptional regulator cofit 56 99
o Lysobacter sp. OAE881 ABIE51_RS18345 sigma-54 dependent transcriptional regulator insig. 53 100
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4560.1 Histidine kinase/response regulator hybrid protein insig. 53 100
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS04010 sigma-54 dependent transcriptional regulator insig. 42 99
  Rhodanobacter denitrificans MT42 LRK55_RS11840 sigma-54 dependent transcriptional regulator no data 40 99
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS12105 sigma-54 dependent transcriptional regulator insig. 40 99
o Rahnella sp. WP5 EX31_RS02520 sigma-54-dependent Fis family transcriptional regulator strong 40 99
o Dickeya dianthicola 67-19 HGI48_RS00425 two-component system response regulator VfmH cofit 39 99
o Dickeya dianthicola ME23 DZA65_RS00425 sigma-54-dependent Fis family transcriptional regulator cofit 39 99
o Dickeya dadantii 3937 DDA3937_RS20820 two-component system response regulator VfmH strong 39 99
o Phocaeicola dorei CL03T12C01 ABI39_RS11790 sigma-54-dependent Fis family transcriptional regulator insig. 38 99
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS15800 sigma-54-dependent Fis family transcriptional regulator strong 38 99
o Bacteroides stercoris CC31F HMPREF1181_RS04840 sigma-54-dependent Fis family transcriptional regulator insig. 40 99
o Bacteroides thetaiotaomicron VPI-5482 BT1529 two-component system response regulator (NCBI ptt file) sig. 39 99
o Bacteroides ovatus ATCC 8483 BACOVA_04200 Sigma-54 interaction domain protein insig. 38 99
  Bacteroides ovatus ATCC 8483 BACOVA_02581 Sigma-54 interaction domain protein insig. 37 99
  Bacteroides ovatus ATCC 8483 BACOVA_04264 Sigma-54 interaction domain protein insig. 38 99
  Phocaeicola dorei CL03T12C01 ABI39_RS16590 sigma-54-dependent Fis family transcriptional regulator insig. 37 99
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS01145 sigma-54-dependent Fis family transcriptional regulator strong 36 99
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS03345 sigma-54-dependent Fis family transcriptional regulator insig. 36 99
  Bacteroides thetaiotaomicron VPI-5482 BT0856 two-component system response regulator (NCBI ptt file) sig. 37 99
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS14460 sigma-54 dependent transcriptional regulator insig. 39 99
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS05570 sigma-54 dependent transcriptional regulator insig. 38 99
  Phocaeicola dorei CL03T12C01 ABI39_RS17680 sigma-54-dependent Fis family transcriptional regulator insig. 35 99
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS04165 sigma-54-dependent Fis family transcriptional regulator insig. 39 96
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2422 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains strong 37 99
  Phocaeicola dorei CL03T12C01 ABI39_RS17605 sigma-54-dependent Fis family transcriptional regulator insig. 36 99
  Bacteroides thetaiotaomicron VPI-5482 BT1469 two-component system response regulator (NCBI ptt file) sig. 36 99
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS12140 sigma-54 dependent transcriptional regulator insig. 37 99
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS03545 sigma-54-dependent Fis family transcriptional regulator sig. 35 99
  Alteromonas macleodii MIT1002 MIT1002_03186 Nitrogen regulation protein NR(I) strong 37 99
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_14055 sigma-54-dependent Fis family transcriptional regulator insig. 38 98
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_07535 sigma-54-dependent Fis family transcriptional regulator insig. 37 99
  Pseudomonas putida KT2440 PP_4371 two component system AtoC DNA-binding transcriptional activator strong 43 81
  Klebsiella michiganensis M5al BWI76_RS00385 nitrogen assimilation regulatory protein strong 38 99
  Serratia liquefaciens MT49 IAI46_24960 nitrogen regulation protein NR(I) strong 37 99
  Pseudomonas fluorescens FW300-N2E3 AO353_18670 Fis family transcriptional regulator strong 42 83
  Escherichia coli BL21 ECD_03753 fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein insig. 37 99
  Pseudomonas syringae pv. syringae B728a Psyr_3459 Helix-turn-helix, Fis-type insig. 44 81
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3459 Helix-turn-helix, Fis-type insig. 44 81
  Pectobacterium carotovorum WPP14 HER17_RS21440 nitrogen regulation protein NR(I) cofit 38 99
  Pseudomonas fluorescens FW300-N2E3 AO353_16225 Fis family transcriptional regulator insig. 36 99
  Acinetobacter radioresistens SK82 MPMX26_01292 DNA-binding transcriptional regulator NtrC strong 36 99
  Dickeya dianthicola 67-19 HGI48_RS21235 nitrogen regulation protein NR(I) strong 38 99
  Dickeya dianthicola ME23 DZA65_RS22210 nitrogen regulation protein NR(I) strong 38 99
  Enterobacter asburiae PDN3 EX28DRAFT_4350 nitrogen regulation protein NR(I) insig. 37 99
  Escherichia coli ECOR27 NOLOHH_06240 glnG nitrogen regulation protein NR(I) cofit 37 99
  Escherichia coli ECRC101 OKFHMN_14110 glnG nitrogen regulation protein NR(I) insig. 37 99
  Escherichia coli ECRC101 MCAODC_04610 glnG nitrogen regulation protein NR(I) insig. 37 99
  Escherichia coli ECRC102 NIAGMN_11865 glnG nitrogen regulation protein NR(I) insig. 37 99
  Escherichia coli ECRC62 BNILDI_05290 glnG nitrogen regulation protein NR(I) insig. 37 99
  Escherichia coli ECRC98 JDDGAC_17735 glnG nitrogen regulation protein NR(I) no data 37 99
  Escherichia coli ECRC99 KEDOAH_14040 glnG nitrogen regulation protein NR(I) no data 37 99
  Escherichia coli BW25113 b3868 glnG fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein (NCBI) strong 37 99
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_04184 DNA-binding transcriptional regulator NtrC insig. 37 99
  Enterobacter sp. TBS_079 MPMX20_04597 DNA-binding transcriptional regulator NtrC strong 37 99
  Dickeya dadantii 3937 DDA3937_RS00125 nitrogen regulation protein NR(I) cofit 38 99
  Shewanella loihica PV-4 Shew_2341 two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) insig. 37 99
  Escherichia coli Nissle 1917 ECOLIN_RS22295 nitrogen regulation protein NR(I) sig. 37 99
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2220 Nitrogen regulation protein NR(I) strong 37 99
  Escherichia fergusonii Becca EFB2_04748 DNA-binding transcriptional regulator NtrC strong 37 99
  Pseudomonas sp. RS175 PFR28_00830 Regulatory protein AtoC cofit 42 81
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS13070 sigma-54 dependent transcriptional regulator insig. 36 96
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS08600 sigma-54 dependent transcriptional regulator insig. 35 99
  Pseudomonas fluorescens SBW25 PFLU_RS21785 sigma-54-dependent Fis family transcriptional regulator cofit 42 81
  Pseudomonas fluorescens SBW25-INTG PFLU_RS21785 sigma-54-dependent Fis family transcriptional regulator cofit 42 81
  Escherichia coli ECOR38 HEPCGN_12740 glnG nitrogen regulation protein NR(I) cofit 37 99
  Escherichia coli BL21 ECD_02147 fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein cofit 39 100
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01490 Regulatory protein AtoC insig. 39 100
  Escherichia coli BW25113 b2220 atoC fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein (NCBI) insig. 39 100
  Rahnella sp. WP5 EX31_RS15880 nitrogen regulation protein NR(I) strong 37 99
  Burkholderia phytofirmans PsJN BPHYT_RS02520 Fis family transcriptional regulator strong 36 99
  Escherichia coli ECOR38 HEPCGN_22430 atoC acetoacetate metabolism transcriptional regulator AtoC cofit 39 100
  Escherichia fergusonii Becca EFB2_01635 Regulatory protein AtoC insig. 39 100
  Escherichia coli Nissle 1917 ECOLIN_RS12965 acetoacetate metabolism transcriptional regulator AtoC no data 39 100
  Pseudomonas stutzeri RCH2 Psest_1767 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains insig. 41 82
  Desulfovibrio vulgaris Miyazaki F DvMF_2149 two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) strong 38 99
  Pantoea sp. MT58 IAI47_00450 nitrogen regulation protein NR(I) strong 37 99
  Paraburkholderia graminis OAS925 ABIE53_000648 two-component system C4-dicarboxylate transport response regulator DctD insig. 36 99
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4355 Flagellar regulatory protein FleQ sig. 38 98
  Rhodospirillum rubrum S1H Rru_A1678 Nitrogen Metabolism Transcriptional Regulator, NtrC, Fis Family (NCBI) strong 36 99
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02037 two component, sigma54 specific, transcriptional regulator, NtrC subfamily, Fis family cofit 36 99
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_02275 sigma-54-dependent Fis family transcriptional regulator insig. 37 99
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2595 Flagellar regulatory protein FleQ sig. 38 98
  Pseudomonas fluorescens FW300-N2C3 AO356_03845 Fis family transcriptional regulator cofit 42 81
  Erwinia tracheiphila SCR3 LU632_RS22135 glnG nitrogen regulation protein NR(I) strong 36 99
  Klebsiella michiganensis M5al BWI76_RS21250 two-component system response regulator GlrR sig. 41 80
  Desulfovibrio vulgaris Hildenborough JW710 DVU3220 atoC sigma-54 dependent transcriptional regulator/response regulator (TIGR) no data 37 99
  Bosea sp. OAE506 ABIE41_RS06145 sigma-54 dependent transcriptional regulator sig. 36 99
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS10015 sigma-54 dependent transcriptional regulator sig. 37 100
  Pseudomonas sp. S08-1 OH686_02845 Flagellar two-component response regulator FleR strong 42 81
  Pseudomonas simiae WCS417 PS417_19815 Fis family transcriptional regulator no data 42 81
  Pseudomonas fluorescens FW300-N2C3 AO356_17800 C4-dicarboxylate ABC transporter strong 37 100