| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Shewanella oneidensis MR-1 | SO1907 | | transcriptional regulator, LysR family (NCBI ptt file) | insig. | 100 | 100 |
| o | Shewanella sp. ANA-3 | Shewana3_1683 | | LysR family transcriptional regulator (RefSeq) | insig. | 92 | 100 |
| o | Shewanella amazonensis SB2B | Sama_2849 | | LysR family transcriptional regulator (RefSeq) | insig. | 49 | 92 |
| o | Rhodanobacter denitrificans MT42 | LRK55_RS14075 | | LysR family transcriptional regulator | insig. | 33 | 87 |
| o | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS14355 | | LysR family transcriptional regulator | insig. | 33 | 87 |
| o | Ralstonia sp. UNC404CL21Col | ABZR87_RS21225 | | LysR family transcriptional regulator | insig. | 31 | 97 |
| o | Agrobacterium fabrum C58 | Atu1209 | | transcriptional regulator, LysR family | sig. | 35 | 96 |
| o | Pseudomonas aeruginosa MRSN321 | DY961_RS22400 | | LysR family transcriptional regulator | insig. | 33 | 99 |
| o | Pseudomonas aeruginosa PUPa3 | DQ20_RS36925 | | LysR family transcriptional regulator | insig. | 33 | 99 |
| o | Pseudomonas aeruginosa PA14 | IKLFDK_23030 | | LysR family transcriptional regulator | insig. | 33 | 99 |
| o | Burkholderia phytofirmans PsJN | BPHYT_RS29085 | | LysR family transcriptional regulator | insig. | 30 | 88 |
| o | Pseudomonas stutzeri RCH2 | Psest_2565 | | Transcriptional regulator | sig. | 33 | 98 |
| o | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02509 | | DNA-binding transcriptional regulator, LysR family | insig. | 31 | 88 |
| o | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3137 | | Transcriptional regulator, LysR family | insig. | 33 | 99 |
| | Rahnella sp. WP5 | EX31_RS05190 | | LysR family transcriptional regulator | insig. | 31 | 85 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS00790 | | LysR family transcriptional regulator | insig. | 29 | 99 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_16420 | | LysR family transcriptional regulator | sig. | 29 | 99 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS40250 | | LysR family transcriptional regulator | sig. | 29 | 99 |
| o | Pseudomonas sp. DMC3 | GFF1218 | | putative HTH-type transcriptional regulator YahB | cofit | 33 | 96 |
| | Pseudomonas sp. SVBP6 | COO64_RS21955 | | LysR family transcriptional regulator | insig. | 29 | 99 |
| o | Herbaspirillum seropedicae SmR1 | HSERO_RS12670 | | LysR family transcriptional regulator | insig. | 35 | 85 |
| | Erwinia amylovora T8 | OLJFJH_02260 | | LysR family transcriptional regulator | insig. | 33 | 85 |
| | Shewanella oneidensis MR-1 | SO2438 | | transcriptional regulator, LysR family (NCBI ptt file) | sig. | 31 | 96 |
| o | Pseudomonas fluorescens FW300-N2E3 | AO353_28560 | | LysR family transcriptional regulator | insig. | 31 | 98 |
| | Pseudomonas sp. BP01 | JOY50_RS01260 | | LysR family transcriptional regulator | insig. | 28 | 96 |
| | Dickeya dianthicola ME23 | DZA65_RS02905 | | LysR family transcriptional regulator | insig. | 33 | 85 |
| | Pectobacterium carotovorum WPP14 | HER17_RS18770 | | LysR family transcriptional regulator | insig. | 32 | 85 |
| | Rhizobium sp. OAE497 | ABIE40_RS08235 | | LysR family transcriptional regulator | insig. | 32 | 100 |
| | Pseudomonas sp. DMC3 | GFF2350 | | HTH-type transcriptional regulator YhaJ | insig. | 29 | 99 |
| | Rahnella sp. WP5 | EX31_RS12620 | | LysR family transcriptional regulator | insig. | 34 | 85 |
| | Dickeya dianthicola 67-19 | HGI48_RS02750 | | LysR family transcriptional regulator | insig. | 33 | 85 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_3825 | | transcriptional regulator, LysR family | insig. | 29 | 96 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_3825 | | transcriptional regulator, LysR family | insig. | 29 | 96 |
| | Pseudomonas putida KT2440 | PP_4539 | | Transcriptional regulator, LysR family | insig. | 28 | 96 |
| | Dickeya dadantii 3937 | DDA3937_RS02775 | | LysR family transcriptional regulator | insig. | 33 | 85 |
| | Serratia liquefaciens MT49 | IAI46_07350 | | LysR family transcriptional regulator | insig. | 32 | 85 |
| | Pseudomonas sp. RS175 | PFR28_00748 | | HTH-type transcriptional regulator YhaJ | sig. | 29 | 99 |
| | Erwinia tracheiphila HP pepo 2.2 | IJEDHG_06645 | | LysR family transcriptional regulator | cofit | 33 | 85 |
| | Erwinia tracheiphila SCR3 | LU632_RS02265 | | LysR family transcriptional regulator | insig. | 33 | 85 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_04235 | | LysR family transcriptional regulator | insig. | 29 | 99 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_2682 | | Transcriptional regulator, LysR family | insig. | 29 | 99 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_548 | | Transcriptional regulator, LysR family | insig. | 28 | 99 |
| | Pseudomonas stutzeri RCH2 | Psest_1624 | | Transcriptional regulator | insig. | 28 | 97 |
| o | Sinorhizobium meliloti 1021 | SMa0353 | | LysR family transcriptional regulator | insig. | 31 | 97 |
| | Shewanella sp. ANA-3 | Shewana3_1944 | | LysR family transcriptional regulator (RefSeq) | insig. | 30 | 96 |
| o | Sphingomonas koreensis DSMZ 15582 | Ga0059261_3906 | | Transcriptional regulator | insig. | 32 | 99 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_04255 | | HTH-type transcriptional regulator YhaJ | cofit | 29 | 99 |
| | Alteromonas macleodii MIT1002 | MIT1002_02374 | | HTH-type transcriptional activator AllS | insig. | 28 | 96 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS22220 | | LysR family transcriptional regulator | insig. | 29 | 99 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS22220 | | LysR family transcriptional regulator | sig. | 29 | 99 |
| | Pseudomonas orientalis W4I3 | QF045_RS22425 | | LysR family transcriptional regulator | insig. | 29 | 99 |
| | Pseudomonas simiae WCS417 | PS417_20525 | | LysR family transcriptional regulator | insig. | 29 | 99 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_4458 | | Transcriptional regulator, LysR family | insig. | 28 | 99 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_18280 | | LysR family transcriptional regulator | sig. | 28 | 99 |
| | Pseudomonas segetis P6 | MPMX49_03254 | | HTH-type transcriptional regulator YhaJ | sig. | 27 | 97 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF3201 | | LysR-family transcriptional regulator YhaJ | insig. | 33 | 85 |
| o | Cupriavidus basilensis FW507-4G11 | RR42_RS22310 | | LysR family transcriptional regulator | insig. | 32 | 96 |
| | Serratia liquefaciens MT49 | IAI46_22280 | | LysR family transcriptional regulator | insig. | 31 | 85 |
| | Dechlorosoma suillum PS | Dsui_1258 | | transcriptional regulator | insig. | 30 | 93 |
| | Pseudomonas sp. S08-1 | OH686_05450 | | Transcriptional regulator, LysR family | cofit | 28 | 97 |
| | Pseudomonas sp. RS175 | PFR28_01506 | | putative HTH-type transcriptional regulator YahB | insig. | 31 | 99 |
| | Escherichia coli ECOR38 | HEPCGN_17285 | yhaJ | DNA-binding transcriptional regulator YhaJ | insig. | 32 | 85 |
| | Escherichia coli ECRC100 | OKFHMN_18450 | yhaJ | DNA-binding transcriptional regulator YhaJ | insig. | 32 | 85 |
| | Escherichia coli ECRC101 | MCAODC_08965 | yhaJ | DNA-binding transcriptional regulator YhaJ | insig. | 32 | 85 |
| | Escherichia coli ECRC102 | NIAGMN_16215 | yhaJ | DNA-binding transcriptional regulator YhaJ | cofit | 32 | 85 |
| | Escherichia coli ECRC98 | JDDGAC_22085 | yhaJ | DNA-binding transcriptional regulator YhaJ | insig. | 32 | 85 |
| | Escherichia coli ECRC99 | KEDOAH_09695 | yhaJ | DNA-binding transcriptional regulator YhaJ | no data | 32 | 85 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_00593 | | HTH-type transcriptional regulator YhaJ | insig. | 32 | 85 |
| | Escherichia coli BW25113 | b3105 | yhaJ | predicted DNA-binding transcriptional regulator (NCBI) | insig. | 32 | 85 |
| | Escherichia coli BL21 | ECD_02974 | | LysR family putative transcriptional regulator | insig. | 32 | 85 |
| | Escherichia fergusonii Becca | EFB2_00708 | | HTH-type transcriptional regulator YhaJ | insig. | 32 | 85 |
| | Escherichia coli ECOR27 | NOLOHH_10230 | yhaJ | DNA-binding transcriptional regulator YhaJ | insig. | 32 | 85 |
| | Escherichia coli ECRC62 | BNILDI_01295 | yhaJ | DNA-binding transcriptional regulator YhaJ | insig. | 32 | 85 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS17890 | | DNA-binding transcriptional regulator YhaJ | insig. | 32 | 85 |
| | Klebsiella michiganensis M5al | BWI76_RS24790 | | LysR family transcriptional regulator | insig. | 31 | 85 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS11420 | | LysR family transcriptional regulator | cofit | 31 | 85 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_05655 | | DNA-binding transcriptional regulator YhaJ | insig. | 31 | 85 |
| o | Sphingobium sp. HT1-2 | GFF5049 | | Transcriptional regulator, LysR family | insig. | 32 | 99 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_3172 | | Transcriptional regulator | strong | 32 | 85 |
| | Enterobacter sp. TBS_079 | MPMX20_04013 | | HTH-type transcriptional regulator YhaJ | sig. | 32 | 85 |
| | Pantoea sp. MT58 | IAI47_02820 | | LysR family transcriptional regulator | insig. | 32 | 85 |
| | Rhodopseudomonas palustris CGA009 | TX73_022195 | | LysR family transcriptional regulator | insig. | 31 | 95 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS17845 | | LysR family transcriptional regulator | insig. | 29 | 100 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_14330 | | LysR family transcriptional regulator | insig. | 29 | 85 |
| o | Caulobacter crescentus NA1000 | CCNA_00832 | | LysR-family transcriptional regulator | cofit | 30 | 96 |
| o | Caulobacter crescentus NA1000 Δfur | CCNA_00832 | | LysR-family transcriptional regulator | cofit | 30 | 96 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS02410 | | LysR family transcriptional regulator | insig. | 29 | 97 |
| | Klebsiella michiganensis M5al | BWI76_RS06255 | | LysR family transcriptional regulator | insig. | 28 | 85 |
| | Escherichia fergusonii Becca | EFB2_01841 | | HTH-type transcriptional regulator YhaJ | insig. | 31 | 84 |
| | Escherichia coli ECOR27 | NOLOHH_15860 | yeeY | Uncharacterized HTH-type transcriptional regulator YeeY | insig. | 31 | 84 |
| | Escherichia coli ECRC62 | BNILDI_14760 | yeeY | Uncharacterized HTH-type transcriptional regulator YeeY | cofit | 31 | 84 |
| | Escherichia coli BW25113 | b2015 | yeeY | putative transcriptional regulator LYSR-type (VIMSS) | insig. | 31 | 84 |
| | Escherichia coli ECOR38 | HEPCGN_03240 | yeeY | Uncharacterized HTH-type transcriptional regulator YeeY | insig. | 31 | 84 |
| | Escherichia coli BL21 | ECD_01918 | | LysR family putative transcriptional regulator | insig. | 31 | 84 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_01685 | | HTH-type transcriptional regulator YhaJ | insig. | 31 | 84 |
| | Enterobacter sp. TBS_079 | MPMX20_02550 | | HTH-type transcriptional regulator YhaJ | insig. | 30 | 95 |
| | Escherichia coli ECRC100 | OKFHMN_24535 | yeeY | Uncharacterized HTH-type transcriptional regulator YeeY | cofit | 31 | 84 |
| | Escherichia coli ECRC101 | MCAODC_20405 | yeeY | Uncharacterized HTH-type transcriptional regulator YeeY | insig. | 31 | 84 |
| | Escherichia coli ECRC102 | NIAGMN_22480 | yeeY | Uncharacterized HTH-type transcriptional regulator YeeY | cofit | 31 | 84 |
| | Escherichia coli ECRC98 | JDDGAC_28645 | yeeY | Uncharacterized HTH-type transcriptional regulator YeeY | insig. | 31 | 84 |