Homologs of SO1744 from Shewanella oneidensis MR-1

AMP-binding protein (NCBI ptt file)
SEED: AMP-dependent synthetase/ligase in alkane synthesis cluster

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella oneidensis MR-1 SO1744 AMP-binding protein (NCBI ptt file) strong 100 100
o Shewanella sp. ANA-3 Shewana3_2713 peptide synthase (RefSeq) insig. 89 100
o Shewanella loihica PV-4 Shew_1715 peptide synthase (RefSeq) no data 66 95
o Shewanella amazonensis SB2B Sama_1184 peptide synthase (RefSeq) cofit 61 95
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.289.1 AMP-dependent synthetase/ligase in alkane synthesis cluster no data 41 96
  Variovorax sp. SCN45 GFF7736 AMP-dependent synthetase/ligase in alkane synthesis cluster no data 37 33
  Variovorax sp. SCN45 GFF5683 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) insig. 26 79
  Cupriavidus basilensis FW507-4G11 RR42_RS32865 4-coumarate--CoA ligase insig. 26 89
  Azospirillum brasilense Sp245 AZOBR_RS19340 long-chain fatty acid--CoA ligase cofit 26 73
  Cupriavidus basilensis FW507-4G11 RR42_RS16820 fatty-acid--CoA ligase insig. 27 52
  Shewanella amazonensis SB2B Sama_1904 AMP-binding domain protein (RefSeq) insig. 25 83
  Pseudomonas fluorescens FW300-N2C3 AO356_28280 hypothetical protein insig. 25 70
  Azospirillum brasilense Sp245 AZOBR_RS24085 AMP-dependent synthetase insig. 25 86
  Cupriavidus basilensis FW507-4G11 RR42_RS29035 acyl-CoA synthetase insig. 24 77
  Variovorax sp. SCN45 GFF6539 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) insig. 26 79
  Herbaspirillum seropedicae SmR1 HSERO_RS19075 acyl-CoA synthetase insig. 23 91
  Cupriavidus basilensis FW507-4G11 RR42_RS29430 acyl-CoA synthetase insig. 26 58
  Acinetobacter radioresistens SK82 MPMX26_00634 3-[(3aS,4S,7aS)-7a-methyl-1, 5-dioxo-octahydro-1H-inden-4-yl]propanoyl:CoA ligase insig. 25 80
  Variovorax sp. OAS795 ABID97_RS00120 AMP-binding protein insig. 24 79
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS18985 salicylate synthase insig. 24 83
  Ralstonia solanacearum UW163 UW163_RS20145 salicylate synthase insig. 24 83
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2896.1 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) sig. 24 80
  Agrobacterium fabrum C58 Atu4822 acyl-CoA synthetase insig. 24 90
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4131 Acetoacetyl-CoA synthetase [leucine] (EC 6.2.1.16) cofit 23 85
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2300 amino acid adenylation domain insig. 22 76
  Burkholderia phytofirmans PsJN BPHYT_RS21775 long-chain fatty acid--CoA ligase insig. 28 51
  Variovorax sp. SCN45 GFF4352 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) insig. 23 81
  Rhodopseudomonas palustris CGA009 TX73_017055 long-chain fatty acid--CoA ligase insig. 27 52
  Cupriavidus basilensis FW507-4G11 RR42_RS24340 hypothetical protein insig. 26 63
  Agrobacterium fabrum C58 Atu0405 long-chain-fatty-acid-CoA-ligase strong 24 83
  Serratia liquefaciens MT49 IAI46_12690 long-chain fatty acid--CoA ligase insig. 25 85
  Desulfovibrio vulgaris Miyazaki F DvMF_0256 AMP-dependent synthetase and ligase (RefSeq) sig. 23 80
  Azospirillum brasilense Sp245 AZOBR_RS26470 acyl-CoA synthetase insig. 27 52
  Variovorax sp. SCN45 GFF4304 Cyclohexanecarboxylate--CoA ligase insig. 24 83
  Cupriavidus basilensis FW507-4G11 RR42_RS36505 long-chain fatty acid--CoA ligase insig. 23 79
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF881 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) insig. 25 77
  Variovorax sp. SCN45 GFF7366 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) insig. 23 81
  Azospirillum brasilense Sp245 AZOBR_RS31155 AMP-dependent synthetase insig. 22 77
  Escherichia fergusonii Becca EFB2_01917 Surfactin synthase subunit 1 insig. 26 63
  Variovorax sp. SCN45 GFF460 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) cofit 24 87
  Shewanella amazonensis SB2B Sama_1934 long-chain-fatty-acid--CoA ligase (RefSeq) strong 22 83
  Pseudomonas fluorescens FW300-N2C3 AO356_28265 hypothetical protein insig. 22 76
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2593 Acetoacetyl-CoA synthetase (EC 6.2.1.16) / Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) insig. 26 76
  Methanococcus maripaludis S2 MMP_RS02990 AMP-binding protein insig. 25 76
  Variovorax sp. SCN45 GFF3786 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) insig. 25 76
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5838 O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26) insig. 26 53
  Pseudomonas putida KT2440 PP_4243 non-ribosomal peptide synthase (subunit of ferribactin synthase) insig. 25 73
  Variovorax sp. OAS795 ABID97_RS17465 malonyl-CoA synthase strong 24 75
  Variovorax sp. OAS795 ABID97_RS28255 long-chain-fatty-acid--CoA ligase insig. 23 85
  Methanococcus maripaludis JJ MMJJ_RS02080 AMP-binding protein insig. 25 76
  Sinorhizobium meliloti 1021 SMc00261 acyl-CoA synthetase insig. 23 85
  Variovorax sp. SCN45 GFF2647 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) insig. 26 51
  Pectobacterium carotovorum WPP14 HER17_RS13745 non-ribosomal peptide synthase/polyketide synthase insig. 24 70
  Desulfovibrio vulgaris Hildenborough JW710 DVU3065 AMP-binding enzyme family protein (TIGR) insig. 24 70
  Paraburkholderia sabiae LMG 24235 QEN71_RS15800 non-ribosomal peptide synthetase insig. 23 93
  Rhizobium sp. OAE497 ABIE40_RS02155 long-chain fatty acid--CoA ligase strong 23 76
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04125 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II strong 25 81
  Ralstonia sp. UNC404CL21Col ABZR87_RS06225 AMP-binding protein insig. 25 78
  Caulobacter crescentus NA1000 CCNA_01889 long-chain-fatty-acid--CoA ligase cofit 25 56
  Caulobacter crescentus NA1000 Δfur CCNA_01889 long-chain-fatty-acid--CoA ligase insig. 25 56
  Pectobacterium carotovorum WPP14 HER17_RS13745 non-ribosomal peptide synthase/polyketide synthase insig. 24 70
  Acidovorax sp. GW101-3H11 Ac3H11_3283 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) insig. 27 57
  Paraburkholderia graminis OAS925 ABIE53_003360 long-chain acyl-CoA synthetase strong 27 53
  Mycobacterium tuberculosis H37Rv Rv0166 Probable fatty-acid-CoA ligase FadD5 (fatty-acid-CoA synthetase) (fatty-acid-CoA synthase) insig. 26 51
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2157 O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26) insig. 25 85
  Castellaniella sp019104865 MT123 ABCV34_RS00670 propionate--CoA ligase insig. 25 76
  Variovorax sp. SCN45 GFF6809 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) insig. 23 79
  Castellaniella sp019104865 MT123 ABCV34_RS11410 AMP-binding protein insig. 21 79
  Paraburkholderia sabiae LMG 24235 QEN71_RS02760 AMP-binding protein insig. 26 52
  Acinetobacter radioresistens SK82 MPMX26_00141 Long-chain-fatty-acid--CoA ligase strong 22 81
  Serratia liquefaciens MT49 IAI46_22815 amino acid adenylation domain-containing protein insig. 22 70
  Pseudomonas simiae WCS417 PS417_13215 Triostin synthetase I insig. 24 75
  Variovorax sp. OAS795 ABID97_RS21085 long-chain fatty acid--CoA ligase insig. 22 79
  Rhodospirillum rubrum S1H Rru_A1312 AMP-dependent synthetase and ligase (NCBI) sig. 21 76
  Pseudomonas fluorescens FW300-N2C3 AO356_26480 hypothetical protein insig. 25 53
  Pseudomonas stutzeri RCH2 Psest_1335 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) (from data) strong 23 77
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2775 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) insig. 22 84
  Paraburkholderia sabiae LMG 24235 QEN71_RS39930 amino acid adenylation domain-containing protein insig. 25 70
  Azospirillum sp. SherDot2 MPMX19_03344 3-[(3aS,4S,7aS)-7a-methyl-1, 5-dioxo-octahydro-1H-inden-4-yl]propanoyl:CoA ligase insig. 23 75
  Acidovorax sp. GW101-3H11 Ac3H11_964 Acetoacetyl-CoA synthetase [leucine] (EC 6.2.1.16) insig. 25 75
  Variovorax sp. SCN45 GFF6538 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) insig. 23 76
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3869 Medium-chain-fatty-acid--CoA ligase (EC 6.2.1.-) insig. 23 79
  Cupriavidus basilensis FW507-4G11 RR42_RS36635 long-chain fatty acid--CoA ligase sig. 25 79
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3540 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) insig. 23 91
  Pseudomonas sp. S08-1 OH686_06100 Long-chain-fatty-acid--CoA ligase insig. 22 76
  Pseudomonas fluorescens SBW25 PFLU_RS15705 non-ribosomal peptide synthetase insig. 22 73
  Pseudomonas fluorescens SBW25-INTG PFLU_RS15705 non-ribosomal peptide synthetase insig. 22 73
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5648 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) insig. 26 51
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2190 Acetoacetyl-CoA synthetase (EC 6.2.1.16) / Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) insig. 25 65
  Variovorax sp. SCN45 GFF2098 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) insig. 25 51
  Mycobacterium tuberculosis H37Rv Rv1427c Possible long-chain-fatty-acid--CoA ligase FadD12 (fatty-acid-CoA synthetase) (fatty-acid-CoA synthase) insig. 25 50
  Shewanella loihica PV-4 Shew_2593 acyl-CoA synthetase (RefSeq) insig. 24 80
  Azospirillum sp. SherDot2 MPMX19_03240 Gramicidin S synthase 2 insig. 24 79
  Dechlorosoma suillum PS Dsui_1605 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II cofit 24 90
  Burkholderia phytofirmans PsJN BPHYT_RS08270 long-chain fatty acid--CoA ligase insig. 23 84
  Burkholderia phytofirmans PsJN BPHYT_RS20260 cytochrome C551 peroxidase cofit 23 69
  Burkholderia phytofirmans PsJN BPHYT_RS15945 AMP-binding protein sig. 26 52
  Rhizobium sp. OAE497 ABIE40_RS14295 non-ribosomal peptide synthetase insig. 24 71
  Mycobacterium tuberculosis H37Rv Rv3089 Probable chain-fatty-acid-CoA ligase FadD13 (fatty-acyl-CoA synthetase) insig. 23 81
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3988 Acetoacetyl-CoA synthetase (EC 6.2.1.16) / Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) insig. 26 78