Homologs of SO0472 from Shewanella oneidensis MR-1

membrane protein, putative (NCBI ptt file)
SEED: putative membrane protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella oneidensis MR-1 SO0472 membrane protein, putative (NCBI ptt file) strong 100 100
o Shewanella sp. ANA-3 Shewana3_0477 hypothetical protein (RefSeq) insig. 91 99
o Rhizobium sp. OAE497 ABIE40_RS09660 AI-2E family transporter strong 61 99
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3026 putative membrane protein insig. 66 88
o Agrobacterium fabrum C58 Atu1739 permease strong 61 92
  Sinorhizobium meliloti 1021 SMc02160 ABC transporter permease no data 60 91
o Acinetobacter radioresistens SK82 MPMX26_02768 Putative transport protein YdiK strong 34 95
o Burkholderia phytofirmans PsJN BPHYT_RS24555 membrane protein no data 30 86
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05390 Predicted PurR-regulated permease PerM sig. 29 85
o Paraburkholderia graminis OAS925 ABIE53_006439 putative PurR-regulated permease PerM insig. 28 85
o Paraburkholderia sabiae LMG 24235 QEN71_RS08425 AI-2E family transporter insig. 31 86
o Pseudomonas fluorescens SBW25 PFLU_RS09095 AI-2E family transporter insig. 30 82
o Pseudomonas fluorescens SBW25-INTG PFLU_RS09095 AI-2E family transporter insig. 30 82
o Pseudomonas sp. RS175 PFR28_03068 Putative transport protein YdiK insig. 29 83
o Pseudomonas sp. DMC3 GFF4801 Putative transport protein YdiK cofit 29 83
o Pseudomonas sp. BP01 JOY50_RS19205 AI-2E family transporter insig. 31 83
o Pseudomonas sp. SVBP6 COO64_RS19035 AI-2E family transporter insig. 30 84
o Pseudomonas putida KT2440 PP_4162 conserved membrane protein of unknown function sig. 31 83
o Pseudomonas simiae WCS417 PS417_09040 hypothetical protein insig. 30 82
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5882 Putative membrane protein strong 29 83
  Paraburkholderia graminis OAS925 ABIE53_001629 putative PurR-regulated permease PerM insig. 26 95
o Cupriavidus basilensis FW507-4G11 RR42_RS03900 membrane protein insig. 28 94
o Pseudomonas fluorescens FW300-N2C3 AO356_19830 hypothetical protein sig. 28 83
  Sinorhizobium meliloti 1021 SMa0447 hypothetical protein insig. 32 92
  Burkholderia phytofirmans PsJN BPHYT_RS06810 membrane protein insig. 27 90
o Pseudomonas syringae pv. syringae B728a Psyr_2029 Protein of unknown function UPF0118 sig. 29 83
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2029 Protein of unknown function UPF0118 insig. 29 83
o Dechlorosoma suillum PS Dsui_0423 putative permease strong 34 64
o Pseudomonas fluorescens GW456-L13 PfGW456L13_2055 Putative membrane protein insig. 28 89
o Variovorax sp. OAS795 ABID97_RS22290 AI-2E family transporter insig. 31 84
o Acidovorax sp. GW101-3H11 Ac3H11_2468 membrane protein, putative sig. 30 83
o Pseudomonas sp. S08-1 OH686_01920 Uncharacterized UPF0118 membrane protein cofit 30 86
  Pseudomonas aeruginosa PA14 IKLFDK_13310 AI-2E family transporter insig. 28 80
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3528 Putative membrane protein sig. 28 83
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04605 Predicted PurR-regulated permease PerM insig. 27 88
o Pseudomonas fluorescens FW300-N2E3 AO353_01690 hypothetical protein strong 28 82
  Paraburkholderia sabiae LMG 24235 QEN71_RS23970 AI-2E family transporter insig. 27 84
o Klebsiella michiganensis M5al BWI76_RS19855 AI-2E family transporter insig. 30 97
  Pseudomonas putida KT2440 PP_2207 conserved membrane protein of unknown function insig. 29 82
o Variovorax sp. SCN45 GFF1804 Uncharacterized UPF0118 membrane protein insig. 29 86
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1907 membrane protein, putative insig. 28 90
  Pseudomonas fluorescens FW300-N2C3 AO356_21305 hypothetical protein insig. 27 90
o Castellaniella sp019104865 MT123 ABCV34_RS06025 AI-2E family transporter cofit 29 96
  Pseudomonas aeruginosa PA14 IKLFDK_07790 AI-2E family transporter insig. 29 85
o Rhodopseudomonas palustris CGA009 TX73_002840 AI-2E family transporter insig. 27 90
o Pantoea sp. MT58 IAI47_14150 AI-2E family transporter cofit 28 95
  Pseudomonas sp. RS175 PFR28_02842 Putative transport protein YdiK insig. 26 93
  Pseudomonas sp. SVBP6 COO64_RS24345 AI-2E family transporter insig. 26 82
  Pseudomonas sp. BP01 JOY50_RS12685 AI-2E family transporter insig. 29 82
o Enterobacter sp. TBS_079 MPMX20_00952 Putative transport protein YdiK insig. 28 92
  Pseudomonas sp. S08-1 OH686_00090 Uncharacterized UPF0118 membrane protein cofit 27 83
o Enterobacter asburiae PDN3 EX28DRAFT_2609 Predicted permease insig. 28 92
o Rahnella sp. WP5 EX31_RS10525 AI-2E family transporter insig. 28 85
o Erwinia amylovora T8 OLJFJH_12970 AI-2E family transporter insig. 26 93
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3926 membrane protein, putative insig. 28 82
  Pseudomonas sp. DMC3 GFF1423 Putative transport protein YdiK cofit 27 82
o Marinobacter adhaerens HP15 HP15_593 protein belonging to uncharacterized protein family UPF0118 sig. 28 97
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_46 membrane protein, putative insig. 26 90
  Pseudomonas fluorescens SBW25 PFLU_RS10475 AI-2E family transporter insig. 31 57
  Pseudomonas fluorescens SBW25-INTG PFLU_RS10475 AI-2E family transporter sig. 31 57
o Pseudomonas stutzeri RCH2 Psest_2012 Predicted permease insig. 28 68
  Pseudomonas simiae WCS417 PS417_10400 membrane protein insig. 30 57
  Paraburkholderia sabiae LMG 24235 QEN71_RS09300 AI-2E family transporter insig. 29 82
o Pectobacterium carotovorum WPP14 HER17_RS20960 AI-2E family transporter insig. 28 96
  Pseudomonas syringae pv. syringae B728a Psyr_3210 Protein of unknown function UPF0118 insig. 28 58
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3210 Protein of unknown function UPF0118 insig. 28 58
  Pseudomonas fluorescens FW300-N2E3 AO353_19805 hypothetical protein sig. 29 57
o Vibrio cholerae E7946 ATCC 55056 CSW01_03285 AI-2E family transporter insig. 27 94
  Pseudomonas stutzeri RCH2 Psest_2464 Predicted permease strong 27 87
o Serratia liquefaciens MT49 IAI46_10470 AI-2E family transporter insig. 27 95
  Erwinia amylovora T8 OLJFJH_14610 AI-2E family transporter YdiK insig. 25 91
  Cupriavidus basilensis FW507-4G11 RR42_RS15425 membrane protein insig. 28 82
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2486 membrane protein, putative insig. 27 90
  Rahnella sp. WP5 EX31_RS13930 AI-2E family transporter YdiK insig. 25 95
o Dickeya dianthicola ME23 DZA65_RS13330 AI-2E family transporter YdiK strong 26 84
o Ralstonia sp. UNC404CL21Col ABZR87_RS08310 AI-2E family transporter insig. 28 82
  Pectobacterium carotovorum WPP14 HER17_RS08900 AI-2E family transporter YdiK insig. 26 84
o Dickeya dianthicola 67-19 HGI48_RS12865 AI-2E family transporter YdiK sig. 26 84
o Shewanella loihica PV-4 Shew_0691 hypothetical protein (RefSeq) insig. 28 90
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3553 Putative membrane protein insig. 24 71
o Erwinia tracheiphila SCR3 LU632_RS11035 ydiK AI-2E family transporter YdiK insig. 26 56
  Pantoea sp. MT58 IAI47_10895 AI-2E family transporter YdiK sig. 26 93
o Dickeya dadantii 3937 DDA3937_RS12800 AI-2E family transporter YdiK strong 25 84
  Pseudomonas fluorescens GW456-L13 PfGW456L13_690 Putative membrane protein insig. 27 97
  Klebsiella michiganensis M5al BWI76_RS17055 hypothetical protein insig. 22 88
o Escherichia coli ECRC100 OKFHMN_27225 ydiK AI-2E family transporter YdiK cofit 23 83
o Escherichia coli ECRC101 MCAODC_18185 ydiK AI-2E family transporter YdiK insig. 23 83
o Escherichia coli ECRC102 NIAGMN_00840 ydiK AI-2E family transporter YdiK insig. 23 83
o Escherichia coli ECRC98 JDDGAC_01800 ydiK AI-2E family transporter YdiK cofit 23 83
o Escherichia coli ECRC99 KEDOAH_00885 ydiK AI-2E family transporter YdiK no data 23 83
o Escherichia coli BL21 ECD_01657 UPF0118 family inner membrane protein insig. 23 83
o Escherichia fergusonii Becca EFB2_02304 Putative transport protein YdiK insig. 23 83
o Escherichia coli ECOR27 NOLOHH_17745 ydiK AI-2E family transporter YdiK insig. 23 83
o Escherichia coli ECOR38 HEPCGN_05610 ydiK AI-2E family transporter YdiK cofit 23 83
o Escherichia coli ECRC62 BNILDI_16535 ydiK AI-2E family transporter YdiK cofit 23 83
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02036 Putative transport protein YdiK sig. 23 83
o Escherichia coli Nissle 1917 ECOLIN_RS09435 AI-2E family transporter YdiK no data 23 83
o Escherichia coli BW25113 b1688 ydiK predicted inner membrane protein (NCBI) insig. 23 83
  Enterobacter sp. TBS_079 MPMX20_01925 Putative transport protein YdiK insig. 25 71
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS10545 AI-2E family transporter insig. 28 90