Conservation of cofitness between TX73_004070 and TX73_014580 in Rhodopseudomonas palustris CGA009

51 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rhodopseudomonas palustris CGA009 1.0 TX73_004070 aminotransferase class V-fold PLP-dependent enzyme 1.0 TX73_014580 excinuclease ABC subunit UvrA 0.48 17
Bosea sp. OAE506 0.59 ABIE41_RS15105 aminotransferase class V-fold PLP-dependent enzyme 0.71 ABIE41_RS15100 excinuclease ABC subunit UvrA low > 77
Dinoroseobacter shibae DFL-12 0.40 Dshi_2090 Serine--glyoxylate transaminase (RefSeq) 0.66 Dshi_1809 excinuclease ABC, A subunit (RefSeq) low > 64
Phaeobacter inhibens DSM 17395 0.39 PGA1_c23940 putative serine-glyoxylate aminotransferase 0.64 PGA1_c17370 uvrABC system protein A low > 62
Paraburkholderia sabiae LMG 24235 0.37 QEN71_RS17005 aminotransferase class V-fold PLP-dependent enzyme 0.56 QEN71_RS01825 excinuclease ABC subunit UvrA low > 153
Paraburkholderia bryophila 376MFSha3.1 0.37 H281DRAFT_03566 alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase 0.56 H281DRAFT_01913 Excinuclease ABC subunit A low > 103
Burkholderia phytofirmans PsJN 0.37 BPHYT_RS34440 serine--glyoxylate aminotransferase 0.56 BPHYT_RS02970 excinuclease ABC subunit A low > 109
Paraburkholderia graminis OAS925 0.37 ABIE53_004690 alanine-glyoxylate transaminase/serine-glyoxylate transaminase/serine-pyruvate transaminase 0.56 ABIE53_000732 excinuclease ABC subunit A low > 113
Cupriavidus basilensis FW507-4G11 0.35 RR42_RS30400 serine--glyoxylate aminotransferase 0.56 RR42_RS02145 excinuclease ABC subunit A low > 128
Variovorax sp. SCN45 0.33 GFF1369 Serine--glyoxylate aminotransferase (EC 2.6.1.45) 0.54 GFF4944 Excinuclease ABC subunit A low > 127
Variovorax sp. OAS795 0.32 ABID97_RS15840 aminotransferase class V-fold PLP-dependent enzyme 0.54 ABID97_RS04340 excinuclease ABC subunit UvrA low > 91
Sinorhizobium meliloti 1021 0.30 SMa2139 SgaA serine-glyoxylate aminotransferase (SGAT) 0.72 SMc01235 excinuclease ABC subunit A low > 103
Synechococcus elongatus PCC 7942 0.27 Synpcc7942_0191 Serine--glyoxylate transaminase 0.52 Synpcc7942_0848 uvrA excinuclease ABC subunit A
Methanococcus maripaludis S2 0.22 MMP_RS02090 alanine--glyoxylate aminotransferase family protein 0.50 MMP_RS03815 excinuclease ABC subunit UvrA
Methanococcus maripaludis JJ 0.22 MMJJ_RS03215 alanine--glyoxylate aminotransferase family protein 0.51 MMJJ_RS01235 excinuclease ABC subunit UvrA
Desulfovibrio vulgaris Miyazaki F 0.18 DvMF_1715 aminotransferase class V (RefSeq) 0.43 DvMF_3050 excinuclease ABC, A subunit (RefSeq)
Desulfovibrio vulgaris Hildenborough JW710 0.17 DVU0494 aminotransferase, class V (TIGR) 0.43 DVU1987 uvrA excinuclease ABC, A subunit (TIGR)
Shewanella loihica PV-4 0.16 Shew_0294 alanine--glyoxylate transaminase (RefSeq) 0.57 Shew_0533 excinuclease ABC, A subunit (RefSeq) low > 60
Vibrio cholerae E7946 ATCC 55056 0.16 CSW01_02070 alanine--glyoxylate aminotransferase family protein 0.58 CSW01_02080 UvrABC system protein A low > 62
Shewanella amazonensis SB2B 0.15 Sama_3277 Serine--pyruvate transaminase (RefSeq) 0.56 Sama_0514 excinuclease ABC, A subunit (RefSeq) low > 62
Shewanella oneidensis MR-1 0.15 SO4343 aminotransferase, class V (NCBI ptt file) 0.57 SO4030 uvrA excinuclease ABC, A subunit (NCBI ptt file) low > 76
Magnetospirillum magneticum AMB-1 0.15 AMB_RS22510 alanine--glyoxylate aminotransferase family protein 0.66 AMB_RS12410 excinuclease ABC subunit UvrA 0.59 14
Alteromonas macleodii MIT1002 0.15 MIT1002_02020 Purine catabolism protein PucG 0.57 MIT1002_00179 Excinuclease ABC subunit A low > 70
Shewanella sp. ANA-3 0.15 Shewana3_0360 alanine-glyoxylate aminotransferase (RefSeq) 0.57 Shewana3_3592 excinuclease ABC subunit A (RefSeq) low > 73
Klebsiella michiganensis M5al 0.14 BWI76_RS10590 class V aminotransferase 0.58 BWI76_RS01950 excinuclease ABC subunit A low > 92
Dickeya dianthicola ME23 0.14 DZA65_RS17800 alanine--glyoxylate aminotransferase family protein 0.58 DZA65_RS18735 excinuclease ABC subunit UvrA low > 75
Rahnella sp. WP5 0.14 EX31_RS21100 alanine--glyoxylate aminotransferase family protein 0.58 EX31_RS11990 excinuclease ABC subunit UvrA low > 89
Serratia liquefaciens MT49 0.14 IAI46_04270 alanine--glyoxylate aminotransferase family protein 0.58 IAI46_22905 excinuclease ABC subunit UvrA low > 86
Pantoea sp. MT58 0.14 IAI47_15250 alanine--glyoxylate aminotransferase family protein 0.58 IAI47_17815 excinuclease ABC subunit UvrA low > 76
Dickeya dianthicola 67-19 0.14 HGI48_RS16710 alanine--glyoxylate aminotransferase family protein 0.58 HGI48_RS17610 excinuclease ABC subunit UvrA low > 71
Enterobacter sp. TBS_079 0.14 MPMX20_01672 (S)-ureidoglycine--glyoxylate transaminase 0.57 MPMX20_00276 UvrABC system protein A low > 85
Pectobacterium carotovorum WPP14 0.14 HER17_RS04560 alanine--glyoxylate aminotransferase family protein 0.57 HER17_RS03550 excinuclease ABC subunit UvrA low > 75
Dickeya dadantii 3937 0.13 DDA3937_RS16640 alanine--glyoxylate aminotransferase family protein 0.58 DDA3937_RS17605 excinuclease ABC subunit UvrA low > 74
Enterobacter asburiae PDN3 0.13 EX28DRAFT_1934 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase 0.57 EX28DRAFT_4246 excinuclease ABC, A subunit low > 76
Rhodospirillum rubrum S1H 0.13 Rru_A2010 Aminotransferase, class V (NCBI) 0.68 Rru_A1752 Excinuclease ABC, A subunit (NCBI) low > 58
Xanthomonas campestris pv. campestris strain 8004 0.12 Xcc-8004.363.1 Serine--pyruvate aminotransferase (EC 2.6.1.51) / L-alanine:glyoxylate aminotransferase (EC 2.6.1.44) 0.57 Xcc-8004.3830.1 Excinuclease ABC subunit A low > 74
Phocaeicola dorei CL03T12C01 0.12 ABI39_RS15035 2-aminoethylphosphonate--pyruvate transaminase 0.48 ABI39_RS15330 excinuclease ABC subunit UvrA low > 72
Bacteroides stercoris CC31F 0.12 HMPREF1181_RS13965 2-aminoethylphosphonate--pyruvate transaminase 0.48 HMPREF1181_RS15185 excinuclease ABC subunit UvrA low > 56
Phocaeicola vulgatus CL09T03C04 0.12 HMPREF1058_RS18720 2-aminoethylphosphonate--pyruvate transaminase 0.48 HMPREF1058_RS01735 excinuclease ABC subunit UvrA low > 67
Caulobacter crescentus NA1000 0.12 CCNA_02687 serine-pyruvate aminotransferase 0.69 CCNA_02673 excinuclease ABC subunit A low > 66
Caulobacter crescentus NA1000 Δfur 0.12 CCNA_02687 serine-pyruvate aminotransferase 0.69 CCNA_02673 excinuclease ABC subunit A low > 67
Bacteroides thetaiotaomicron VPI-5482 0.12 BT1718 putative 2-aminoethylphosphonate pyruvate aminotransferase (NCBI ptt file) 0.49 BT0578 excinuclease ABC subunit A (NCBI ptt file) low > 81
Bacteroides ovatus ATCC 8483 0.12 BACOVA_01426 2-aminoethylphosphonate--pyruvate transaminase 0.49 BACOVA_03703 excinuclease ABC, A subunit low > 94
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.11 GFF4333 2-aminoethylphosphonate:pyruvate aminotransferase (EC 2.6.1.37) 0.58 GFF1429 Excinuclease ABC subunit A low > 78
Agrobacterium fabrum C58 0.09 Atu3217 aspartate aminotransferase 0.72 Atu1513 ABC excinuclease subunit A 0.18 65
Azospirillum sp. SherDot2 0.09 MPMX19_05151 2-aminoethylphosphonate--pyruvate transaminase 0.68 MPMX19_01152 UvrABC system protein A low > 112
Pseudomonas simiae WCS417 0.08 PS417_17145 2-aminoethylphosphonate--pyruvate aminotransferase 0.60 PS417_25395 excinuclease ABC subunit A low > 88
Pseudomonas fluorescens FW300-N1B4 0.08 Pf1N1B4_3959 2-aminoethylphosphonate:pyruvate aminotransferase (EC 2.6.1.37) 0.60 Pf1N1B4_2611 Excinuclease ABC subunit A low > 87
Pseudomonas fluorescens FW300-N2E3 0.08 AO353_20240 2-aminoethylphosphonate--pyruvate aminotransferase 0.59 AO353_06855 ABC-ATPase UvrA low > 101
Parabacteroides merdae CL09T00C40 0.08 HMPREF1078_RS07055 2-aminoethylphosphonate--pyruvate transaminase 0.47 HMPREF1078_RS00835 excinuclease ABC subunit UvrA low > 61
Pseudomonas fluorescens GW456-L13 0.08 PfGW456L13_2571 2-aminoethylphosphonate:pyruvate aminotransferase (EC 2.6.1.37) 0.60 PfGW456L13_1283 Excinuclease ABC subunit A low > 87
Echinicola vietnamensis KMM 6221, DSM 17526 0.07 Echvi_1811 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase 0.50 Echvi_1138 excinuclease ABC, A subunit

Not shown: 0 genomes with orthologs for TX73_004070 only; 51 genomes with orthologs for TX73_014580 only