Conservation of cofitness between RS_RS24605 and RS_RS13890 in Ralstonia solanacearum GMI1000

66 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Ralstonia solanacearum GMI1000 1.0 RS_RS24605 glucokinase 1.0 RS_RS13890 shikimate dehydrogenase 0.36 17
Ralstonia solanacearum PSI07 0.93 RPSI07_RS07305 glucokinase 0.92 RPSI07_RS11300 shikimate dehydrogenase low > 81
Ralstonia solanacearum IBSBF1503 0.92 RALBFv3_RS16400 glucokinase 0.89 RALBFv3_RS05945 shikimate dehydrogenase low > 76
Ralstonia solanacearum UW163 0.92 UW163_RS17140 glucokinase 0.89 UW163_RS07680 shikimate dehydrogenase — —
Ralstonia sp. UNC404CL21Col 0.88 ABZR87_RS22905 glucokinase 0.86 ABZR87_RS01605 shikimate dehydrogenase low > 80
Cupriavidus basilensis FW507-4G11 0.44 RR42_RS37395 glucokinase 0.49 RR42_RS17645 shikimate dehydrogenase low > 128
Herbaspirillum seropedicae SmR1 0.39 HSERO_RS17870 glucokinase 0.48 HSERO_RS01990 shikimate 5-dehydrogenase low > 78
Dickeya dadantii 3937 0.37 DDA3937_RS21130 glucokinase 0.35 DDA3937_RS19100 shikimate dehydrogenase — —
Dickeya dianthicola ME23 0.36 DZA65_RS00150 glucokinase 0.35 DZA65_RS20315 shikimate dehydrogenase — —
Dickeya dianthicola 67-19 0.36 HGI48_RS00130 glucokinase 0.35 HGI48_RS19190 shikimate dehydrogenase — —
Escherichia coli ECOR27 0.35 NOLOHH_14010 glk glucokinase 0.34 NOLOHH_09355 aroE shikimate dehydrogenase low > 75
Pantoea sp. MT58 0.35 IAI47_05555 glucokinase 0.35 IAI47_02315 shikimate dehydrogenase — —
Azospirillum sp. SherDot2 0.35 MPMX19_02240 Glucokinase 0.15 MPMX19_02560 Shikimate dehydrogenase (NADP(+)) — —
Erwinia tracheiphila SCR3 0.35 LU632_RS04645 glk glucokinase 0.34 LU632_RS22445 aroE shikimate dehydrogenase low > 74
Escherichia coli HS(pFamp)R (ATCC 700891) 0.35 OHPLBJKB_01333 Glucokinase 0.34 OHPLBJKB_00422 Shikimate dehydrogenase (NADP(+)) low > 73
Escherichia coli ECRC98 0.35 JDDGAC_26290 glk glucokinase 0.34 JDDGAC_21185 aroE shikimate dehydrogenase low > 86
Escherichia coli BW25113 0.35 b2388 glk glucokinase (NCBI) 0.34 b3281 aroE dehydroshikimate reductase, NAD(P)-binding (NCBI) low > 76
Escherichia coli BL21 0.35 ECD_02298 glucokinase 0.34 ECD_03132 dehydroshikimate reductase, NAD(P)-binding low > 61
Escherichia coli ECRC100 0.35 OKFHMN_22325 glk glucokinase 0.34 OKFHMN_17565 aroE shikimate dehydrogenase low > 80
Escherichia coli ECRC101 0.35 MCAODC_12855 glk glucokinase 0.34 MCAODC_08085 aroE shikimate dehydrogenase low > 87
Pectobacterium carotovorum WPP14 0.35 HER17_RS14705 glucokinase 0.34 HER17_RS02250 shikimate dehydrogenase low > 75
Escherichia coli ECRC62 0.35 BNILDI_12860 glk glucokinase 0.34 BNILDI_02165 aroE shikimate dehydrogenase low > 75
Escherichia coli ECRC102 0.35 NIAGMN_20100 glk glucokinase 0.34 NIAGMN_15325 aroE shikimate dehydrogenase — —
Escherichia coli ECRC99 0.35 KEDOAH_05895 glk glucokinase 0.34 KEDOAH_10585 aroE shikimate dehydrogenase — —
Escherichia coli ECOR38 0.35 HEPCGN_21530 glk glucokinase 0.33 HEPCGN_16385 aroE shikimate dehydrogenase low > 87
Escherichia fergusonii Becca 0.35 EFB2_01486 Glucokinase 0.34 EFB2_00542 Shikimate dehydrogenase (NADP(+)) low > 86
Escherichia coli Nissle 1917 0.35 ECOLIN_RS13735 glucokinase 0.35 ECOLIN_RS18840 shikimate dehydrogenase low > 55
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.35 GFF1972 Glucokinase (EC 2.7.1.2) 0.34 GFF2397 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) low > 78
Rahnella sp. WP5 0.34 EX31_RS20035 glucokinase 0.35 EX31_RS15950 shikimate dehydrogenase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.34 GFF1626 Glucokinase (EC 2.7.1.2) 0.42 GFF5226 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) low > 90
Acidovorax sp. GW101-3H11 0.33 Ac3H11_2067 Glucokinase (EC 2.7.1.2) 0.40 Ac3H11_4044 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) low > 79
Serratia liquefaciens MT49 0.33 IAI46_18215 glucokinase 0.34 IAI46_23240 shikimate dehydrogenase low > 86
Klebsiella michiganensis M5al 0.33 BWI76_RS20510 glucokinase 0.35 BWI76_RS25645 shikimate dehydrogenase low > 92
Marinobacter adhaerens HP15 0.33 HP15_2173 glucokinase 0.41 HP15_3750 shikimate dehydrogenase — —
Enterobacter asburiae PDN3 0.33 EX28DRAFT_0237 glucokinase, proteobacterial type 0.33 EX28DRAFT_0046 shikimate dehydrogenase low > 76
Enterobacter sp. TBS_079 0.32 MPMX20_03281 Glucokinase 0.32 MPMX20_04189 Shikimate dehydrogenase (NADP(+)) low > 85
Azospirillum brasilense Sp245 0.31 AZOBR_RS05405 glucokinase 0.14 AZOBR_RS01765 shikimate 5-dehydrogenase — —
Caulobacter crescentus NA1000 Δfur 0.30 CCNA_02133 glucokinase 0.15 CCNA_00003 shikimate 5-dehydrogenase low > 67
Caulobacter crescentus NA1000 0.30 CCNA_02133 glucokinase 0.15 CCNA_00003 shikimate dehydrogenase (EC 1.1.1.25) (from data) 0.68 37
Pseudomonas fluorescens GW456-L13 0.30 PfGW456L13_1890 Glucokinase (EC 2.7.1.2) 0.43 PfGW456L13_644 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) low > 87
Pseudomonas simiae WCS417 0.29 PS417_22685 Glucokinase (EC 2.7.1.2) (from data) 0.43 PS417_00125 shikimate dehydrogenase — —
Alteromonas macleodii MIT1002 0.29 MIT1002_02404 Glucokinase 0.28 MIT1002_00029 Shikimate dehydrogenase — —
Pseudomonas fluorescens FW300-N2E3 0.29 AO353_03415 glucokinase 0.43 AO353_10670 shikimate dehydrogenase low > 101
Pseudomonas fluorescens SBW25 0.29 PFLU_RS24325 glucokinase 0.41 PFLU_RS00120 shikimate dehydrogenase — —
Pseudomonas fluorescens SBW25-INTG 0.29 PFLU_RS24325 glucokinase 0.41 PFLU_RS00120 shikimate dehydrogenase — —
Pseudomonas fluorescens FW300-N1B4 0.29 Pf1N1B4_600 Glucokinase (EC 2.7.1.2) 0.44 Pf1N1B4_1906 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) low > 87
Pseudomonas putida KT2440 0.28 PP_1011 glucokinase 0.41 PP_0074 shikimate 5-dehydrogenase — —
Pseudomonas fluorescens FW300-N2E2 0.27 Pf6N2E2_2897 Glucokinase (EC 2.7.1.2) 0.42 Pf6N2E2_4130 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) — —
Pseudomonas fluorescens FW300-N2C3 0.26 AO356_05215 glucokinase 0.43 AO356_11315 shikimate dehydrogenase low > 104
Pseudomonas sp. RS175 0.26 PFR28_00562 Glucokinase 0.43 PFR28_04655 Shikimate dehydrogenase (NADP(+)) — —
Pseudomonas stutzeri RCH2 0.26 Psest_1893 glucokinase, proteobacterial type 0.41 Psest_0029 shikimate 5-dehydrogenase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.26 Psyr_1110 glucokinase 0.43 Psyr_0025 shikimate dehydrogenase low > 86
Pseudomonas syringae pv. syringae B728a 0.26 Psyr_1110 glucokinase 0.43 Psyr_0025 shikimate dehydrogenase low > 86
Pseudomonas sp. S08-1 0.25 OH686_02485 glucokinase 0.42 OH686_12485 Shikimate 5-dehydrogenase I alpha low > 80
Lysobacter sp. OAE881 0.23 ABIE51_RS08865 glucokinase 0.29 ABIE51_RS01815 shikimate dehydrogenase low > 62
Rhodanobacter denitrificans MT42 0.23 LRK55_RS07435 glucokinase 0.28 LRK55_RS08360 shikimate dehydrogenase low > 63
Agrobacterium fabrum C58 0.23 Atu0184 glucokinase 0.18 Atu0003 shikimate 5-dehydrogenase — —
Rhodanobacter denitrificans FW104-10B01 0.23 LRK54_RS07705 glucokinase 0.28 LRK54_RS08595 shikimate dehydrogenase low > 59
Dyella japonica UNC79MFTsu3.2 0.22 ABZR86_RS13055 glucokinase 0.24 ABZR86_RS14985 shikimate dehydrogenase 0.65 32
Xanthomonas campestris pv. campestris strain 8004 0.22 Xcc-8004.2449.1 Glucokinase (EC 2.7.1.2) 0.29 Xcc-8004.5020.1 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.48 61
Sinorhizobium meliloti 1021 0.22 SMc02835 glucokinase 0.17 SMc02791 shikimate 5-dehydrogenase — —
Rhodanobacter sp. FW510-T8 0.22 OKGIIK_14235 glk glucokinase 0.25 OKGIIK_15365 aroE shikimate dehydrogenase low > 52
Synechococcus elongatus PCC 7942 0.22 Synpcc7942_0221 glk glucokinase 0.17 Synpcc7942_2467 aroE shikimate 5-dehydrogenase — —
Sphingomonas koreensis DSMZ 15582 0.21 Ga0059261_0355 glucokinase, proteobacterial type 0.13 Ga0059261_2194 shikimate dehydrogenase (EC 1.1.1.25) (from data) — —
Rhizobium sp. OAE497 0.21 ABIE40_RS00595 glucokinase 0.15 ABIE40_RS19250 shikimate dehydrogenase — —
Bosea sp. OAE506 0.20 ABIE41_RS11090 glucokinase 0.17 ABIE41_RS04650 shikimate dehydrogenase — —
Dinoroseobacter shibae DFL-12 0.19 Dshi_1655 glucokinase (EC 2.7.1.2) (from data) 0.21 Dshi_3450 shikimate 5-dehydrogenase (RefSeq) — —

Not shown: 2 genomes with orthologs for RS_RS24605 only; 33 genomes with orthologs for RS_RS13890 only