Conservation of cofitness between RR42_RS00615 and RR42_RS04460 in Cupriavidus basilensis FW507-4G11

65 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS00615 recombinase XerC 1.0 RR42_RS04460 chorismate mutase 0.46 2
Ralstonia solanacearum PSI07 0.55 RPSI07_RS23690 tyrosine recombinase XerC 0.72 RPSI07_RS19710 prephenate dehydratase low > 81
Ralstonia solanacearum GMI1000 0.54 RS_RS00260 Tyrosine recombinase XerC 1 0.71 RS_RS04495 prephenate dehydratase low > 80
Ralstonia sp. UNC404CL21Col 0.52 ABZR87_RS05065 tyrosine recombinase XerC 0.72 ABZR87_RS09450 prephenate dehydratase low > 80
Ralstonia solanacearum UW163 0.52 UW163_RS03905 tyrosine recombinase XerC 0.72 UW163_RS16050 chorismate mutase — —
Ralstonia solanacearum IBSBF1503 0.52 RALBFv3_RS09675 tyrosine recombinase XerC 0.72 RALBFv3_RS13760 chorismate mutase low > 76
Paraburkholderia sabiae LMG 24235 0.44 QEN71_RS00355 tyrosine recombinase XerC 0.58 QEN71_RS04070 prephenate dehydratase — —
Burkholderia phytofirmans PsJN 0.43 BPHYT_RS01655 tyrosine recombinase XerC 0.59 BPHYT_RS14910 chorismate mutase — —
Paraburkholderia bryophila 376MFSha3.1 0.43 H281DRAFT_02202 integrase/recombinase XerC 0.59 H281DRAFT_03925 chorismate mutase — —
Paraburkholderia graminis OAS925 0.43 ABIE53_000426 integrase/recombinase XerC 0.59 ABIE53_003157 chorismate mutase/prephenate dehydratase — —
Herbaspirillum seropedicae SmR1 0.40 HSERO_RS21475 recombinase XerC 0.61 HSERO_RS18430 chorismate mutase low > 78
Dechlorosoma suillum PS 0.40 Dsui_0651 tyrosine recombinase XerC 0.47 Dsui_1940 chorismate mutase, clade 2 — —
Acidovorax sp. GW101-3H11 0.38 Ac3H11_1995 Tyrosine recombinase XerC 0.51 Ac3H11_2574 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) low > 79
Hydrogenophaga sp. GW460-11-11-14-LB1 0.38 GFF547 Tyrosine recombinase XerC 0.51 GFF5343 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) low > 90
Castellaniella sp019104865 MT123 0.37 ABCV34_RS13455 tyrosine recombinase XerC 0.52 ABCV34_RS07110 prephenate dehydratase low > 48
Variovorax sp. SCN45 0.36 GFF4490 Site-specific tyrosine recombinase XerC 0.51 GFF6182 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) low > 127
Variovorax sp. OAS795 0.36 ABID97_RS06150 tyrosine recombinase XerC 0.51 ABID97_RS09515 prephenate dehydratase — —
Pseudomonas sp. S08-1 0.34 OH686_13785 tyrosine recombinase XerC 0.44 OH686_20870 Chorismate mutase I / Prephenate dehydratase low > 80
Pseudomonas fluorescens FW300-N2E3 0.34 AO353_09050 recombinase XerC 0.44 AO353_02070 prephenate dehydratase low > 101
Pseudomonas stutzeri RCH2 0.33 Psest_3767 tyrosine recombinase XerC 0.43 Psest_1984 chorismate mutase domain of proteobacterial P-protein, clade 2 — —
Pseudomonas fluorescens GW456-L13 0.33 PfGW456L13_842 Tyrosine recombinase XerC 0.44 PfGW456L13_2176 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) low > 87
Pseudomonas fluorescens FW300-N2C3 0.32 AO356_12725 recombinase XerC 0.44 AO356_03465 prephenate dehydratase — —
Pseudomonas syringae pv. syringae B728a 0.32 Psyr_0185 tyrosine recombinase XerC subunit 0.45 Psyr_3645 prephenate dehydratase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.32 Psyr_0185 tyrosine recombinase XerC subunit 0.45 Psyr_3645 prephenate dehydratase — —
Pseudomonas fluorescens FW300-N2E2 0.32 Pf6N2E2_4416 Tyrosine recombinase XerC 0.44 Pf6N2E2_2520 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) — —
Pseudomonas sp. RS175 0.32 PFR28_04378 Tyrosine recombinase XerC 0.45 PFR28_00907 Bifunctional chorismate mutase/prephenate dehydratase — —
Pseudomonas putida KT2440 0.32 PP_5230 Tyrosine recombinase XerC 0.45 PP_1769 chorismate mutase/Prephenate dehydratase — —
Pseudomonas fluorescens FW300-N1B4 0.32 Pf1N1B4_2171 Tyrosine recombinase XerC 0.44 Pf1N1B4_350 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) low > 87
Dyella japonica UNC79MFTsu3.2 0.32 ABZR86_RS15025 tyrosine recombinase XerC 0.42 ABZR86_RS02225 prephenate dehydratase low > 74
Serratia liquefaciens MT49 0.32 IAI46_00725 tyrosine recombinase XerC 0.21 IAI46_03965 bifunctional chorismate mutase/prephenate dehydratase low > 86
Pantoea sp. MT58 0.32 IAI47_18400 tyrosine recombinase XerC 0.22 IAI47_04410 bifunctional chorismate mutase/prephenate dehydratase low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.31 GFF239 Tyrosine recombinase XerC 0.19 GFF4179 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) — —
Rhodanobacter sp. FW510-T8 0.31 OKGIIK_15325 xerC tyrosine recombinase XerC 0.41 OKGIIK_06915 pheA prephenate dehydratase — —
Klebsiella michiganensis M5al 0.31 BWI76_RS01210 tyrosine recombinase XerC 0.22 BWI76_RS21465 bifunctional chorismate mutase/prephenate dehydratase low > 92
Rahnella sp. WP5 0.31 EX31_RS15165 tyrosine recombinase XerC 0.20 EX31_RS07585 bifunctional chorismate mutase/prephenate dehydratase low > 89
Xanthomonas campestris pv. campestris strain 8004 0.31 Xcc-8004.847.1 Site-specific tyrosine recombinase 0.42 Xcc-8004.3282.1 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) — —
Lysobacter sp. OAE881 0.31 ABIE51_RS03035 tyrosine recombinase XerC 0.42 ABIE51_RS12145 prephenate dehydratase low > 62
Escherichia coli ECRC100 0.31 OKFHMN_14420 xerC tyrosine recombinase XerC 0.22 OKFHMN_21225 pheA bifunctional chorismate mutase/prephenate dehydratase low > 80
Dickeya dadantii 3937 0.31 DDA3937_RS19890 tyrosine recombinase XerC 0.21 DDA3937_RS16130 bifunctional chorismate mutase/prephenate dehydratase — —
Escherichia coli ECRC99 0.31 KEDOAH_13730 xerC tyrosine recombinase XerC 0.22 KEDOAH_06995 pheA bifunctional chorismate mutase/prephenate dehydratase — —
Rhodanobacter denitrificans MT42 0.31 LRK55_RS08300 tyrosine recombinase XerC 0.43 LRK55_RS00135 prephenate dehydratase low > 63
Escherichia coli ECRC98 0.31 JDDGAC_18045 xerC tyrosine recombinase XerC 0.22 JDDGAC_24890 pheA bifunctional chorismate mutase/prephenate dehydratase — —
Escherichia coli ECRC101 0.31 MCAODC_04925 xerC tyrosine recombinase XerC 0.22 MCAODC_11755 pheA bifunctional chorismate mutase/prephenate dehydratase — —
Escherichia coli ECRC102 0.31 NIAGMN_12175 xerC tyrosine recombinase XerC 0.22 NIAGMN_18995 pheA bifunctional chorismate mutase/prephenate dehydratase — —
Escherichia fergusonii Becca 0.31 EFB2_04826 Tyrosine recombinase XerC 0.22 EFB2_01293 Bifunctional chorismate mutase/prephenate dehydratase low > 86
Escherichia coli ECOR27 0.31 NOLOHH_06550 xerC tyrosine recombinase XerC 0.22 NOLOHH_12900 pheA bifunctional chorismate mutase/prephenate dehydratase low > 75
Escherichia coli BL21 0.31 ECD_03687 site-specific tyrosine recombinase 0.22 ECD_02488 chorismate mutase and prephenate dehydratase, P-protein low > 61
Escherichia coli BW25113 0.31 b3811 xerC site-specific tyrosine recombinase XerC (NCBI) 0.22 b2599 pheA fused chorismate mutase P/prephenate dehydratase (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.31 OHPLBJKB_04239 Tyrosine recombinase XerC 0.22 OHPLBJKB_01109 P-protein low > 73
Escherichia coli Nissle 1917 0.31 ECOLIN_RS21875 tyrosine recombinase XerC 0.22 ECOLIN_RS14695 bifunctional chorismate mutase/prephenate dehydratase low > 55
Escherichia coli ECOR38 0.31 HEPCGN_13125 xerC tyrosine recombinase XerC 0.22 HEPCGN_20345 pheA bifunctional chorismate mutase/prephenate dehydratase low > 87
Enterobacter asburiae PDN3 0.31 EX28DRAFT_4480 tyrosine recombinase XerC 0.22 EX28DRAFT_2699 chorismate mutase (EC 5.4.99.5) — —
Marinobacter adhaerens HP15 0.31 HP15_250 site-specific tyrosine recombinase XerC 0.43 HP15_1362 chorismate mutase / prephenate dehydratase — —
Escherichia coli ECRC62 0.31 BNILDI_04985 xerC tyrosine recombinase XerC 0.22 BNILDI_11705 pheA bifunctional chorismate mutase/prephenate dehydratase low > 75
Dickeya dianthicola 67-19 0.31 HGI48_RS20045 tyrosine recombinase XerC 0.21 HGI48_RS16250 bifunctional chorismate mutase/prephenate dehydratase low > 71
Dickeya dianthicola ME23 0.30 DZA65_RS21090 tyrosine recombinase XerC 0.22 DZA65_RS17345 bifunctional chorismate mutase/prephenate dehydratase low > 75
Pectobacterium carotovorum WPP14 0.30 HER17_RS01350 tyrosine recombinase XerC 0.22 HER17_RS05385 bifunctional chorismate mutase/prephenate dehydratase low > 75
Enterobacter sp. TBS_079 0.30 MPMX20_04465 Tyrosine recombinase XerC 0.22 MPMX20_03466 Bifunctional chorismate mutase/prephenate dehydratase low > 85
Rhodanobacter denitrificans FW104-10B01 0.29 LRK54_RS08535 tyrosine recombinase XerC 0.43 LRK54_RS00395 prephenate dehydratase low > 59
Erwinia tracheiphila SCR3 0.29 LU632_RS24135 xerC tyrosine recombinase XerC 0.22 LU632_RS16960 pheA bifunctional chorismate mutase/prephenate dehydratase — —
Pseudomonas fluorescens SBW25 0.29 PFLU_RS29280 tyrosine recombinase XerC 0.45 PFLU_RS08095 prephenate dehydratase — —
Pseudomonas simiae WCS417 0.29 PS417_27595 recombinase XerC 0.45 PS417_08125 prephenate dehydratase low > 88
Pseudomonas fluorescens SBW25-INTG 0.29 PFLU_RS29280 tyrosine recombinase XerC 0.45 PFLU_RS08095 prephenate dehydratase — —
Kangiella aquimarina DSM 16071 0.28 B158DRAFT_0244 tyrosine recombinase XerC subunit 0.20 B158DRAFT_1385 Prephenate dehydratase low > 40
Alteromonas macleodii MIT1002 0.28 MIT1002_00157 Tyrosine recombinase XerC 0.23 MIT1002_01316 P-protein low > 70
Vibrio cholerae E7946 ATCC 55056 0.26 CSW01_00650 tyrosine recombinase XerC 0.22 CSW01_03680 bifunctional chorismate mutase/prephenate dehydratase low > 62

Not shown: 19 genomes with orthologs for RR42_RS00615 only; 3 genomes with orthologs for RR42_RS04460 only