| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Cupriavidus basilensis FW507-4G11 | 1.0 | RR42_RS02595 | | glutamine amidotransferase | 1.0 | RR42_RS01855 | | rRNA methylase | 0.29 | 20 |
| Ralstonia sp. UNC404CL21Col | 0.89 | ABZR87_RS07540 | | class II glutamine amidotransferase | 0.89 | ABZR87_RS06775 | | tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL | low | > 80 |
| Ralstonia solanacearum UW163 | 0.86 | UW163_RS02010 | | class II glutamine amidotransferase | 0.88 | UW163_RS02655 | | tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.86 | RALBFv3_RS11575 | | class II glutamine amidotransferase | 0.88 | RALBFv3_RS10925 | | tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL | — | — |
| Ralstonia solanacearum GMI1000 | 0.86 | RS_RS02405 | | class II glutamine amidotransferase | 0.87 | RS_RS01765 | | tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL | low | > 80 |
| Ralstonia solanacearum PSI07 | 0.86 | RPSI07_RS21635 | | class II glutamine amidotransferase | 0.87 | RPSI07_RS22385 | | tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL | low | > 81 |
| Paraburkholderia sabiae LMG 24235 | 0.79 | QEN71_RS26860 | | class II glutamine amidotransferase | 0.80 | QEN71_RS01475 | | tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL | low | > 153 |
| Paraburkholderia graminis OAS925 | 0.79 | ABIE53_003506 | | putative glutamine amidotransferase | 0.74 | ABIE53_000669 | | tRNA (cytidine/uridine-2'-O-)-methyltransferase | low | > 113 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.79 | H281DRAFT_04266 | | glutamine amidotransferase | 0.75 | H281DRAFT_01998 | | tRNA (cytidine/uridine-2'-O-)-methyltransferase | low | > 103 |
| Burkholderia phytofirmans PsJN | 0.77 | BPHYT_RS16680 | | glutamine amidotransferase | 0.76 | BPHYT_RS02620 | | tRNA methyltransferase | low | > 109 |
| Castellaniella sp019104865 MT123 | 0.66 | ABCV34_RS06215 | | class II glutamine amidotransferase | 0.69 | ABCV34_RS14245 | | tRNA (cytidine(34)-2'-O)-methyltransferase | low | > 48 |
| Acinetobacter radioresistens SK82 | 0.63 | MPMX26_02412 | | Putative glutamine amidotransferase YafJ | 0.49 | MPMX26_00707 | | tRNA (cytidine(34)-2'-O)-methyltransferase | low | > 36 |
| Herbaspirillum seropedicae SmR1 | 0.62 | HSERO_RS24040 | | glutamine amidotransferase | 0.81 | HSERO_RS20815 | | tRNA methyltransferase | low | > 78 |
| Variovorax sp. OAS795 | 0.61 | ABID97_RS04635 | | class II glutamine amidotransferase | 0.66 | ABID97_RS23985 | | tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL | low | > 91 |
| Variovorax sp. SCN45 | 0.59 | GFF6320 | | Putative glutamine amidotransferase YafJ | 0.65 | GFF2293 | | tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207) | low | > 127 |
| Dechlorosoma suillum PS | 0.59 | Dsui_1425 | | putative glutamine amidotransferase | 0.54 | Dsui_1278 | | putative rRNA methylase SpoU family | low | > 51 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.56 | GFF3024 | | Glutamine amidotransferase, class-II | 0.64 | GFF684 | | tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207) | — | — |
| Enterobacter sp. TBS_079 | 0.48 | MPMX20_00912 | | Putative glutamine amidotransferase YafJ | 0.60 | MPMX20_00127 | | tRNA (cytidine(34)-2'-O)-methyltransferase | low | > 85 |
| Rahnella sp. WP5 | 0.48 | EX31_RS21015 | | class II glutamine amidotransferase | 0.61 | EX31_RS14330 | | tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL | low | > 89 |
| Enterobacter asburiae PDN3 | 0.47 | EX28DRAFT_2666 | | Predicted glutamine amidotransferase | 0.61 | EX28DRAFT_3857 | | tRNA (cytidine(34)-2'-O)-methyltransferase | low | > 76 |
| Escherichia coli Nissle 1917 | 0.47 | ECOLIN_RS01755 | | class II glutamine amidotransferase | 0.60 | ECOLIN_RS20585 | | tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL | low | > 55 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.47 | OHPLBJKB_03416 | | Putative glutamine amidotransferase YafJ | 0.59 | OHPLBJKB_00093 | | 'tRNA (cytidine(34)-2'-O)-methyltransferase' transl_table=11 | low | > 73 |
| Escherichia coli ECOR27 | 0.47 | NOLOHH_02140 | yafJ | Putative glutamine amidotransferase YafJ | 0.59 | NOLOHH_07645 | trmL | tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine (34)-2'-O)-methyltransferase TrmL | low | > 75 |
| Escherichia coli BW25113 | 0.47 | b0223 | yafJ | predicted amidotransfease (NCBI) | 0.60 | b3606 | yibK | predicted rRNA methylase (NCBI) | low | > 76 |
| Escherichia coli ECRC62 | 0.47 | BNILDI_00335 | yafJ | Putative glutamine amidotransferase YafJ | 0.59 | BNILDI_03870 | trmL | tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine (34)-2'-O)-methyltransferase TrmL | low | > 75 |
| Escherichia fergusonii Becca | 0.47 | EFB2_03794 | | Putative glutamine amidotransferase YafJ | 0.59 | EFB2_00204 | | tRNA (cytidine(34)-2'-O)-methyltransferase | low | > 86 |
| Escherichia coli ECOR38 | 0.47 | HEPCGN_07875 | yafJ | Putative glutamine amidotransferase YafJ | 0.60 | HEPCGN_14605 | trmL | tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine (34)-2'-O)-methyltransferase TrmL | low | > 87 |
| Erwinia tracheiphila SCR3 | 0.47 | LU632_RS01140 | | class II glutamine amidotransferase | 0.59 | LU632_RS21865 | trmL | tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL | low | > 74 |
| Pantoea sp. MT58 | 0.47 | IAI47_15185 | | class II glutamine amidotransferase | 0.60 | IAI47_00750 | | tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL | low | > 76 |
| Pectobacterium carotovorum WPP14 | 0.47 | HER17_RS04650 | | class II glutamine amidotransferase | 0.55 | HER17_RS00645 | | tRNA (cytidine(34)-2'-O)-methyltransferase | low | > 75 |
| Escherichia coli ECRC101 | 0.47 | MCAODC_00290 | yafJ | class II glutamine amidotransferase | 0.59 | MCAODC_06275 | trmL | tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine (34)-2'-O)-methyltransferase TrmL | low | > 87 |
| Escherichia coli ECRC100 | 0.47 | OKFHMN_09770 | yafJ | class II glutamine amidotransferase | 0.59 | OKFHMN_15765 | trmL | tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine (34)-2'-O)-methyltransferase TrmL | low | > 80 |
| Escherichia coli ECRC99 | 0.47 | KEDOAH_18385 | yafJ | class II glutamine amidotransferase | 0.59 | KEDOAH_12385 | trmL | tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine (34)-2'-O)-methyltransferase TrmL | — | — |
| Escherichia coli ECRC98 | 0.47 | JDDGAC_13395 | yafJ | class II glutamine amidotransferase | 0.59 | JDDGAC_19390 | trmL | tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine (34)-2'-O)-methyltransferase TrmL | low | > 86 |
| Escherichia coli ECRC102 | 0.47 | NIAGMN_07630 | yafJ | class II glutamine amidotransferase | 0.59 | NIAGMN_13525 | trmL | tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine (34)-2'-O)-methyltransferase TrmL | — | — |
| Escherichia coli BL21 | 0.47 | ECD_00218 | | type 2 glutamine amidotransferase family protein | 0.59 | ECD_03464 | | tRNA Leu mC34,mU34 2'-O-methyltransferase, SAM-dependent | low | > 61 |
| Klebsiella michiganensis M5al | 0.47 | BWI76_RS05480 | | class II glutamine amidotransferase | 0.59 | BWI76_RS27200 | | tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL | low | > 92 |
| Serratia liquefaciens MT49 | 0.47 | IAI46_04345 | | class II glutamine amidotransferase | 0.62 | IAI46_24670 | | tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL | low | > 86 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.47 | GFF4102 | | Predicted glutamine amidotransferase | 0.60 | GFF408 | | 'tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207)' transl_table=11 | low | > 78 |
| Shewanella loihica PV-4 | 0.47 | Shew_2107 | | glutamine amidotransferase, class-II (RefSeq) | 0.46 | Shew_3577 | | RNA methyltransferase (RefSeq) | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.46 | Pf6N2E2_2711 | | Glutamine amidotransferase, class-II | 0.58 | Pf6N2E2_3828 | | tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207) | low | > 103 |
| Dickeya dianthicola 67-19 | 0.46 | HGI48_RS16655 | | class II glutamine amidotransferase | 0.55 | HGI48_RS20615 | | tRNA (cytidine(34)-2'-O)-methyltransferase | low | > 71 |
| Pseudomonas fluorescens FW300-N2C3 | 0.46 | AO356_04350 | | glutamine amidotransferase | 0.60 | AO356_09750 | | rRNA methylase | low | > 104 |
| Pseudomonas fluorescens GW456-L13 | 0.46 | PfGW456L13_4482 | | Glutamine amidotransferase, class-II | 0.61 | PfGW456L13_349 | | tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207) | low | > 87 |
| Pseudomonas sp. S08-1 | 0.46 | OH686_05255 | | Putative glutamine amidotransferase YafJ | 0.61 | OH686_14675 | | tRNA (cytidine(34)-2'-O)-methyltransferase | low | > 80 |
| Vibrio cholerae E7946 ATCC 55056 | 0.46 | CSW01_11360 | | class II glutamine amidotransferase | 0.54 | CSW01_13605 | | tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL | low | > 62 |
| Dickeya dadantii 3937 | 0.46 | DDA3937_RS16585 | | class II glutamine amidotransferase | 0.55 | DDA3937_RS00755 | | tRNA (cytidine(34)-2'-O)-methyltransferase | low | > 74 |
| Dickeya dianthicola ME23 | 0.46 | DZA65_RS17745 | | class II glutamine amidotransferase | 0.55 | DZA65_RS21630 | | tRNA (cytidine(34)-2'-O)-methyltransferase | low | > 75 |
| Shewanella oneidensis MR-1 | 0.46 | SO2535 | | hypothetical amidotransferase (NCBI ptt file) | 0.53 | SO4529 | | RNA methyltransferase, TrmH family, group 2 (NCBI ptt file) | low | > 76 |
| Pseudomonas fluorescens FW300-N2E3 | 0.46 | AO353_17960 | | glutamine amidotransferase | 0.57 | AO353_12135 | | rRNA methylase | low | > 101 |
| Pseudomonas sp. RS175 | 0.46 | PFR28_00725 | | Putative glutamine amidotransferase YafJ | 0.60 | PFR28_04942 | | 'tRNA (cytidine(34)-2'-O)-methyltransferase' transl_table=11 | low | > 88 |
| Pseudomonas fluorescens FW300-N1B4 | 0.45 | Pf1N1B4_3359 | | Glutamine amidotransferase, class-II | 0.59 | Pf1N1B4_1613 | | tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207) | — | — |
| Pseudomonas fluorescens SBW25 | 0.45 | PFLU_RS07540 | | class II glutamine amidotransferase | 0.57 | PFLU_RS01675 | | tRNA (cytidine(34)-2'-O)-methyltransferase | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.45 | PFLU_RS07540 | | class II glutamine amidotransferase | 0.57 | PFLU_RS01675 | | tRNA (cytidine(34)-2'-O)-methyltransferase | low | > 109 |
| Pseudomonas simiae WCS417 | 0.45 | PS417_07455 | | glutamine amidotransferase | 0.59 | PS417_01625 | | rRNA methylase | — | — |
| Shewanella sp. ANA-3 | 0.45 | Shewana3_2322 | | glutamine amidotransferase, class-II (RefSeq) | 0.52 | Shewana3_3934 | | RNA methyltransferase (RefSeq) | low | > 73 |
| Pseudomonas syringae pv. syringae B728a | 0.45 | Psyr_1576 | | Glutamine amidotransferase, class-II | 0.60 | Psyr_4881 | | RNA methyltransferase TrmH, group 2 | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.45 | Psyr_1576 | | Glutamine amidotransferase, class-II | 0.60 | Psyr_4881 | | RNA methyltransferase TrmH, group 2 | low | > 86 |
| Pseudomonas stutzeri RCH2 | 0.45 | Psest_1849 | | Predicted glutamine amidotransferase | 0.63 | Psest_3934 | | rRNA methylase, putative, group 2 | low | > 67 |
| Azospirillum brasilense Sp245 | 0.44 | AZOBR_RS05605 | | glutamine amidotransferase | 0.32 | AZOBR_RS20740 | | tRNA methyltransferase | low | > 97 |
| Pseudomonas putida KT2440 | 0.44 | PP_4581 | | putative amidotransferase | 0.63 | PP_5052 | | tRNA(Leu) mC34,mU34 2'-O-ribose methyltransferase, AdoMet-dependent | low | > 96 |
| Shewanella amazonensis SB2B | 0.44 | Sama_1869 | | amidotransferase (RefSeq) | 0.51 | Sama_3440 | | RNA methyltransferase TrmH, group 2 (RefSeq) | low | > 62 |
| Synechococcus elongatus PCC 7942 | 0.40 | Synpcc7942_2184 | | hypothetical protein | 0.39 | Synpcc7942_1874 | | RNA methyltransferase TrmH, group 2 | low | > 38 |
| Mycobacterium tuberculosis H37Rv | 0.11 | Rv1061 | | Conserved protein | 0.47 | Rv3366 | | Probable tRNA/rRNA methylase SpoU (tRNA/rRNA methyltransferase) | low | > 58 |
| Rhizobium sp. OAE497 | 0.10 | ABIE40_RS01490 | | class II glutamine amidotransferase | 0.30 | ABIE40_RS13160 | | tRNA (cytidine(34)-2'-O)-methyltransferase | low | > 107 |
Not shown: 2 genomes with orthologs for RR42_RS02595 only; 22 genomes with orthologs for RR42_RS01855 only