Conservation of cofitness between Psyr_2975 and Psyr_4732 in Pseudomonas syringae pv. syringae B728a

62 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_2975 Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 1.0 Psyr_4732 choline dehydrogenase 0.46 1
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_2975 Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 1.00 Psyr_4732 choline dehydrogenase low > 86
Pseudomonas fluorescens SBW25 0.98 PFLU_RS14570 peroxiredoxin 0.90 PFLU_RS27995 choline dehydrogenase low > 109
Pseudomonas fluorescens SBW25-INTG 0.98 PFLU_RS14570 peroxiredoxin 0.90 PFLU_RS27995 choline dehydrogenase low > 109
Pseudomonas simiae WCS417 0.98 PS417_14045 alkyl hydroperoxide reductase 0.90 PS417_26345 choline dehydrogenase low > 88
Pseudomonas fluorescens FW300-N2C3 0.95 AO356_22805 alkyl hydroperoxide reductase 0.89 AO356_13790 choline dehydrogenase low > 104
Pseudomonas fluorescens FW300-N1B4 0.95 Pf1N1B4_5011 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) 0.89 Pf1N1B4_2416 Choline dehydrogenase (EC 1.1.99.1) — —
Pseudomonas fluorescens FW300-N2E2 0.95 Pf6N2E2_447 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) 0.89 Pf6N2E2_4677 Choline dehydrogenase (EC 1.1.99.1) low > 103
Pseudomonas sp. RS175 0.95 PFR28_02482 Alkyl hydroperoxide reductase C 0.90 PFR28_04168 Oxygen-dependent choline dehydrogenase low > 88
Pseudomonas fluorescens GW456-L13 0.95 PfGW456L13_2927 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) 0.90 PfGW456L13_1082 Choline dehydrogenase (EC 1.1.99.1) low > 87
Pseudomonas fluorescens FW300-N2E3 0.94 AO353_26965 alkyl hydroperoxide reductase 0.90 AO353_07810 choline dehydrogenase low > 101
Pseudomonas putida KT2440 0.88 PP_2439 peroxiredoxin, alkylhydroperoxide reductase - small subunit 0.88 PP_5064 choline dehydrogenase low > 96
Azospirillum sp. SherDot2 0.87 MPMX19_05835 Alkyl hydroperoxide reductase C 0.76 MPMX19_01457 Oxygen-dependent choline dehydrogenase low > 112
Rhodanobacter sp. FW510-T8 0.86 OKGIIK_06555 ahpC alkyl hydroperoxide reductase subunit C 0.35 OKGIIK_01330 betA GMC family oxidoreductase low > 52
Rhodanobacter denitrificans FW104-10B01 0.84 LRK54_RS00705 alkyl hydroperoxide reductase subunit C 0.33 LRK54_RS05470 choline dehydrogenase low > 59
Rhodanobacter denitrificans MT42 0.84 LRK55_RS00480 alkyl hydroperoxide reductase subunit C 0.33 LRK55_RS05245 choline dehydrogenase low > 63
Dyella japonica UNC79MFTsu3.2 0.83 ABZR86_RS08490 alkyl hydroperoxide reductase subunit C 0.29 ABZR86_RS18900 GMC family oxidoreductase N-terminal domain-containing protein low > 74
Herbaspirillum seropedicae SmR1 0.81 HSERO_RS21540 alkyl hydroperoxide reductase subunit C 0.32 HSERO_RS23855 choline dehydrogenase low > 78
Acinetobacter radioresistens SK82 0.81 MPMX26_02009 Alkyl hydroperoxide reductase C 0.78 MPMX26_02368 Oxygen-dependent choline dehydrogenase low > 36
Lysobacter sp. OAE881 0.81 ABIE51_RS05485 alkyl hydroperoxide reductase subunit C 0.35 ABIE51_RS16345 choline dehydrogenase low > 62
Paraburkholderia sabiae LMG 24235 0.79 QEN71_RS13380 alkyl hydroperoxide reductase subunit C 0.78 QEN71_RS08170 choline dehydrogenase low > 153
Castellaniella sp019104865 MT123 0.78 ABCV34_RS09920 alkyl hydroperoxide reductase subunit C 0.32 ABCV34_RS13185 GMC family oxidoreductase N-terminal domain-containing protein low > 48
Burkholderia phytofirmans PsJN 0.78 BPHYT_RS26845 alkyl hydroperoxide reductase subunit C 0.78 BPHYT_RS25155 oxygen-dependent choline dehydrogenase — —
Paraburkholderia graminis OAS925 0.78 ABIE53_005904 peroxiredoxin 0.78 ABIE53_006149 choline dehydrogenase low > 113
Sphingomonas koreensis DSMZ 15582 0.78 Ga0059261_0155 peroxiredoxin 0.29 Ga0059261_2257 Choline dehydrogenase and related flavoproteins low > 68
Paraburkholderia bryophila 376MFSha3.1 0.78 H281DRAFT_02890 peroxiredoxin (alkyl hydroperoxide reductase subunit C) 0.79 H281DRAFT_02463 choline dehydrogenase low > 103
Pantoea sp. MT58 0.77 IAI47_06790 alkyl hydroperoxide reductase subunit C 0.81 IAI47_08645 choline dehydrogenase 0.71 29
Caulobacter crescentus NA1000 0.76 CCNA_03012 peroxiredoxin 0.42 CCNA_02725 choline dehydrogenase low > 66
Caulobacter crescentus NA1000 Δfur 0.76 CCNA_03012 peroxiredoxin 0.42 CCNA_02725 choline dehydrogenase — —
Pectobacterium carotovorum WPP14 0.75 HER17_RS02545 alkyl hydroperoxide reductase subunit C 0.83 HER17_RS08395 choline dehydrogenase low > 75
Klebsiella michiganensis M5al 0.75 BWI76_RS07940 alkyl hydroperoxide reductase subunit C 0.80 BWI76_RS07610 choline dehydrogenase low > 92
Escherichia fergusonii Becca 0.75 EFB2_03486 Alkyl hydroperoxide reductase C 0.79 EFB2_03724 Oxygen-dependent choline dehydrogenase low > 86
Escherichia coli ECOR38 0.75 HEPCGN_00770 ahpC alkyl hydroperoxide reductase subunit C 0.79 HEPCGN_07610 betA choline dehydrogenase low > 87
Escherichia coli ECRC102 0.75 NIAGMN_05565 ahpC alkyl hydroperoxide reductase subunit C 0.79 NIAGMN_07105 betA choline dehydrogenase — —
Escherichia coli BL21 0.75 ECD_00574 alkyl hydroperoxide reductase, C22 subunit 0.79 ECD_00267 choline dehydrogenase, a flavoprotein low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.75 OHPLBJKB_03100 Alkyl hydroperoxide reductase C 0.79 OHPLBJKB_03364 Oxygen-dependent choline dehydrogenase low > 73
Escherichia coli BW25113 0.75 b0605 ahpC alkyl hydroperoxide reductase, C22 subunit (NCBI) 0.79 b0311 betA choline dehydrogenase (NCBI) low > 76
Escherichia coli ECRC62 0.75 BNILDI_21895 ahpC alkyl hydroperoxide reductase subunit C 0.79 BNILDI_00025 betA choline dehydrogenase low > 75
Escherichia coli ECRC98 0.75 JDDGAC_11155 ahpC alkyl hydroperoxide reductase subunit C 0.79 JDDGAC_12700 betA choline dehydrogenase low > 86
Escherichia coli ECRC100 0.75 OKFHMN_07510 ahpC alkyl hydroperoxide reductase subunit C 0.79 OKFHMN_09050 betA choline dehydrogenase low > 80
Escherichia coli ECOR27 0.75 NOLOHH_23885 ahpC alkyl hydroperoxide reductase subunit C 0.79 NOLOHH_01900 betA choline dehydrogenase low > 75
Escherichia coli ECRC101 0.75 MCAODC_26725 ahpC alkyl hydroperoxide reductase subunit C 0.79 MCAODC_28275 betA choline dehydrogenase low > 87
Escherichia coli Nissle 1917 0.75 ECOLIN_RS03320 alkyl hydroperoxide reductase subunit C 0.79 ECOLIN_RS02050 choline dehydrogenase low > 55
Escherichia coli ECRC99 0.75 KEDOAH_20460 ahpC alkyl hydroperoxide reductase subunit C 0.79 KEDOAH_18915 betA choline dehydrogenase — —
Enterobacter asburiae PDN3 0.74 EX28DRAFT_2350 peroxiredoxin 0.79 EX28DRAFT_2388 choline dehydrogenase low > 76
Dickeya dadantii 3937 0.74 DDA3937_RS02515 alkyl hydroperoxide reductase subunit C 0.76 DDA3937_RS13260 choline dehydrogenase low > 74
Enterobacter sp. TBS_079 0.74 MPMX20_01271 Alkyl hydroperoxide reductase C 0.80 MPMX20_01228 Oxygen-dependent choline dehydrogenase low > 85
Alteromonas macleodii MIT1002 0.73 MIT1002_01784 Alkyl hydroperoxide reductase subunit C 0.47 MIT1002_02909 Choline dehydrogenase low > 70
Marinobacter adhaerens HP15 0.72 HP15_3622 peroxiredoxin 0.52 HP15_3625 choline dehydrogenase low > 73
Pseudomonas stutzeri RCH2 0.70 Psest_1133 peroxiredoxin 0.82 Psest_2633 choline dehydrogenase — —
Xanthomonas campestris pv. campestris strain 8004 0.68 Xcc-8004.4221.1 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) 0.81 Xcc-8004.964.1 Choline dehydrogenase (EC 1.1.99.1) low > 74
Ralstonia solanacearum PSI07 0.68 RPSI07_RS00930 peroxiredoxin 0.32 RPSI07_RS08325 choline dehydrogenase low > 81
Ralstonia solanacearum GMI1000 0.67 RS_RS18335 peroxiredoxin 0.31 RS_RS16760 choline dehydrogenase low > 80
Hydrogenophaga sp. GW460-11-11-14-LB1 0.67 GFF3914 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) 0.31 GFF377 Choline dehydrogenase (EC 1.1.99.1) low > 90
Ralstonia solanacearum UW163 0.67 UW163_RS22815 peroxiredoxin 0.32 UW163_RS04665 choline dehydrogenase — —
Ralstonia solanacearum IBSBF1503 0.67 RALBFv3_RS22270 peroxiredoxin 0.32 RALBFv3_RS08945 choline dehydrogenase low > 76
Variovorax sp. SCN45 0.67 GFF2826 Alkyl hydroperoxide reductase protein C (EC 1.11.1.15) 0.38 GFF867 Oxidoreductase, GMC family low > 127
Variovorax sp. OAS795 0.67 ABID97_RS10800 alkyl hydroperoxide reductase subunit C 0.33 ABID97_RS29430 GMC family oxidoreductase N-terminal domain-containing protein low > 91
Ralstonia sp. UNC404CL21Col 0.66 ABZR87_RS17235 alkyl hydroperoxide reductase subunit C 0.67 ABZR87_RS06565 choline dehydrogenase low > 80
Acidovorax sp. GW101-3H11 0.63 Ac3H11_233 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) 0.34 Ac3H11_4659 Choline dehydrogenase (EC 1.1.99.1) — —
Serratia liquefaciens MT49 0.36 IAI46_04825 peroxiredoxin C 0.85 IAI46_07720 choline dehydrogenase low > 86
Rahnella sp. WP5 0.35 EX31_RS22080 peroxiredoxin C 0.85 EX31_RS18815 choline dehydrogenase low > 89
Cupriavidus basilensis FW507-4G11 0.27 RR42_RS07870 alkyl hydroperoxide reductase 0.34 RR42_RS29710 choline dehydrogenase low > 128

Not shown: 28 genomes with orthologs for Psyr_2975 only; 8 genomes with orthologs for Psyr_4732 only