| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas syringae pv. syringae B728a | 1.0 | Psyr_4231 | | ATP-binding region, ATPase-like:Histidine kinase A, N-terminal | 1.0 | Psyr_4281 | | cytochrome bd quinol oxidase subunit 2 apoprotein | 0.63 | 1 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 1.00 | Psyr_4231 | | ATP-binding region, ATPase-like:Histidine kinase A, N-terminal | 1.00 | Psyr_4281 | | cytochrome bd quinol oxidase subunit 2 apoprotein | 0.52 | 7 |
| Pseudomonas fluorescens FW300-N2E3 | 0.78 | AO353_05340 | | histidine kinase | 0.89 | AO353_13945 | | ubiquinol oxidase subunit II | low | > 101 |
| Pseudomonas fluorescens GW456-L13 | 0.78 | PfGW456L13_5049 | | Sensor histidine kinase PrrB (RegB) (EC 2.7.3.-) | 0.89 | PfGW456L13_1436 | | putative Cytochrome bd2, subunit II | low | > 87 |
| Pseudomonas fluorescens FW300-N1B4 | 0.78 | Pf1N1B4_1116 | | Sensor histidine kinase PrrB (RegB) (EC 2.7.3.-) | 0.90 | Pf1N1B4_2761 | | putative Cytochrome bd2, subunit II | low | > 87 |
| Pseudomonas simiae WCS417 | 0.77 | PS417_04095 | | histidine kinase | 0.89 | PS417_24345 | | ubiquinol oxidase subunit II | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.76 | Pf6N2E2_3303 | | Sensor histidine kinase PrrB (RegB) (EC 2.7.3.-) | 0.84 | Pf6N2E2_5069 | | putative Cytochrome bd2, subunit II | 0.76 | 2 |
| Pseudomonas fluorescens SBW25-INTG | 0.76 | PFLU_RS04135 | | HAMP domain-containing histidine kinase | 0.89 | PFLU_RS26265 | | cytochrome d ubiquinol oxidase subunit II | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.76 | PFLU_RS04135 | | HAMP domain-containing histidine kinase | 0.89 | PFLU_RS26265 | | cytochrome d ubiquinol oxidase subunit II | low | > 109 |
| Pseudomonas fluorescens FW300-N2C3 | 0.76 | AO356_07210 | | histidine kinase | 0.84 | AO356_15645 | | ubiquinol oxidase subunit II | 0.33 | 64 |
| Pseudomonas sp. RS175 | 0.73 | PFR28_00136 | | Sensor histidine kinase RegB | 0.84 | PFR28_03800 | | Cytochrome bd-II ubiquinol oxidase subunit 2 | — | — |
| Pseudomonas putida KT2440 | 0.73 | PP_0887 | | Sensor histidine kinase | 0.85 | PP_4650 | | Ubiquinol oxidase subunit II, cyanide insensitive | low | > 96 |
| Pseudomonas sp. S08-1 | 0.64 | OH686_08685 | | Sensor histidine kinase PrrB (RegB) | 0.79 | OH686_01510 | | cytochrome d ubiquinol oxidase, subunit II | low | > 80 |
| Pseudomonas stutzeri RCH2 | 0.60 | Psest_3339 | | Signal transduction histidine kinase | 0.80 | Psest_2558 | | cytochrome d oxidase, subunit II (cydB) | low | > 67 |
| Dechlorosoma suillum PS | 0.27 | Dsui_1181 | | signal transduction histidine kinase | 0.21 | Dsui_1916 | | cytochrome d oxidase cyd, subunit II | low | > 51 |
| Paraburkholderia sabiae LMG 24235 | 0.24 | QEN71_RS00320 | | ATP-binding protein | 0.56 | QEN71_RS07820 | | cytochrome d ubiquinol oxidase subunit II | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.23 | ABZR86_RS10110 | | ATP-binding protein | 0.16 | ABZR86_RS11960 | | cytochrome d ubiquinol oxidase subunit II | low | > 74 |
| Cupriavidus basilensis FW507-4G11 | 0.22 | RR42_RS01090 | | histidine kinase | 0.74 | RR42_RS28280 | | ubiquinol oxidase subunit II | low | > 128 |
| Paraburkholderia graminis OAS925 | 0.22 | ABIE53_000419 | | two-component system sensor histidine kinase RegB | 0.54 | ABIE53_006517 | | cytochrome d ubiquinol oxidase subunit II | 0.49 | 1 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.22 | H281DRAFT_02209 | | two-component system, sensor histidine kinase RegB | 0.57 | H281DRAFT_06433 | | cytochrome bd-I ubiquinol oxidase subunit 2 apoprotein | — | — |
| Ralstonia solanacearum PSI07 | 0.22 | RPSI07_RS23755 | | sensor histidine kinase | 0.52 | RPSI07_RS05550 | | cytochrome d ubiquinol oxidase subunit II | low | > 81 |
| Ralstonia sp. UNC404CL21Col | 0.22 | ABZR87_RS05140 | | ATP-binding protein | 0.34 | ABZR87_RS18835 | | cytochrome d ubiquinol oxidase subunit II | low | > 80 |
| Ralstonia solanacearum IBSBF1503 | 0.21 | RALBFv3_RS09610 | | sensor histidine kinase | 0.53 | RALBFv3_RS18085 | | cytochrome d ubiquinol oxidase subunit II | low | > 76 |
| Ralstonia solanacearum UW163 | 0.21 | UW163_RS03970 | | sensor histidine kinase | 0.52 | UW163_RS21045 | | cytochrome d ubiquinol oxidase subunit II | — | — |
| Ralstonia solanacearum GMI1000 | 0.21 | RS_RS00195 | | sensor histidine kinase | 0.52 | RS_RS22955 | | cytochrome d ubiquinol oxidase subunit II | low | > 80 |
| Burkholderia phytofirmans PsJN | 0.21 | BPHYT_RS01620 | | sensor histidine kinase | 0.58 | BPHYT_RS30685 | | ubiquinol oxidase subunit II, cyanide insensitive | low | > 109 |
| Herbaspirillum seropedicae SmR1 | 0.21 | HSERO_RS13005 | | histidine kinase | 0.20 | HSERO_RS15345 | | cytochrome BD oxidase subunit II | low | > 78 |
| Variovorax sp. OAS795 | 0.20 | ABID97_RS07615 | | ATP-binding protein | 0.72 | ABID97_RS28655 | | cytochrome d ubiquinol oxidase subunit II | low | > 91 |
| Rhodanobacter denitrificans MT42 | 0.19 | LRK55_RS03805 | | histidine kinase dimerization/phospho-acceptor domain-containing protein | 0.19 | LRK55_RS11430 | | cytochrome d ubiquinol oxidase subunit II | 0.62 | 41 |
| Variovorax sp. SCN45 | 0.19 | GFF5673 | | Sensor histidine kinase PrrB (RegB) (EC 2.7.3.-) | 0.22 | GFF2652 | | Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) | low | > 127 |
| Rhodanobacter denitrificans FW104-10B01 | 0.19 | LRK54_RS04035 | | ATP-binding protein | 0.19 | LRK54_RS11705 | | cytochrome d ubiquinol oxidase subunit II | 0.80 | 7 |
| Azospirillum sp. SherDot2 | 0.19 | MPMX19_06180 | | Sensor histidine kinase RegB | 0.58 | MPMX19_05025 | | Cytochrome bd-I ubiquinol oxidase subunit 2 | low | > 112 |
| Sphingomonas koreensis DSMZ 15582 | 0.19 | Ga0059261_1561 | | Signal transduction histidine kinase | 0.51 | Ga0059261_3866 | | cytochrome bd-I ubiquinol oxidase subunit 2 apoprotein (EC 1.10.3.10) | 0.75 | 3 |
| Shewanella loihica PV-4 | 0.18 | Shew_3343 | | integral membrane sensor signal transduction histidine kinase (RefSeq) | 0.20 | Shew_1303 | | cytochrome d ubiquinol oxidase, subunit II (RefSeq) | — | — |
| Dinoroseobacter shibae DFL-12 | 0.18 | Dshi_3432 | | integral membrane sensor signal transduction histidine kinase (RefSeq) | 0.36 | Dshi_2689 | | cytochrome bd ubiquinol oxidase subunit II (RefSeq) | low | > 64 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.17 | A4249_RS04470 | | ATP-binding protein | 0.51 | A4249_RS11600 | | cytochrome d ubiquinol oxidase subunit II | low | > 48 |
| Rhodanobacter sp. FW510-T8 | 0.17 | OKGIIK_10895 | | Histidine kinase | 0.17 | OKGIIK_12190 | cydB | cytochrome d ubiquinol oxidase subunit II | low | > 52 |
| Rhodopseudomonas palustris CGA009 | 0.17 | TX73_002965 | | ActS/PrrB/RegB family redox-sensitive histidine kinase | 0.54 | TX73_024915 | | cytochrome d ubiquinol oxidase subunit II | low | > 86 |
| Marinobacter adhaerens HP15 | 0.17 | HP15_3982 | | sensor signal transduction histidine kinase-like protein | 0.50 | HP15_1747 | | cytochrome d ubiquinol oxidase, subunit II | low | > 73 |
| Rhizobium sp. OAE497 | 0.16 | ABIE40_RS19510 | | ActS/PrrB/RegB family redox-sensitive histidine kinase | 0.21 | ABIE40_RS20495 | | cytochrome d ubiquinol oxidase subunit II | low | > 107 |
| Shewanella amazonensis SB2B | 0.16 | Sama_3187 | | sensor histidine kinase (RefSeq) | 0.22 | Sama_2348 | | cytochrome bd-I oxidase subunit II (RefSeq) | low | > 62 |
| Shewanella oneidensis MR-1 | 0.16 | SO4173 | | sensor histidine kinase (NCBI ptt file) | 0.23 | SO3285 | cydB | cytochrome d ubiquinol oxidase, subunit II (NCBI ptt file) | low | > 76 |
| Agrobacterium fabrum C58 | 0.16 | Atu0051 | | two component sensor kinase | 0.22 | Atu4092 | | cytochrome d oxidase subunit II | low | > 89 |
| Sinorhizobium meliloti 1021 | 0.16 | SMc02585 | | sensor histidine kinase transmembrane protein | 0.51 | SMc02254 | | quinol oxidase subunit II transmembrane protein | — | — |
| Phaeobacter inhibens DSM 17395 | 0.16 | PGA1_c35370 | | sensor histidine kinase RegB | 0.51 | PGA1_c19660 | | cytochrome d ubiquinol oxidase subunit 2 | low | > 62 |
| Shewanella sp. ANA-3 | 0.15 | Shewana3_3708 | | ATPase domain-containing protein (RefSeq) | 0.67 | Shewana3_0927 | | cytochrome d ubiquinol oxidase, subunit II (RefSeq) | low | > 73 |
| Kangiella aquimarina DSM 16071 | 0.15 | B158DRAFT_1931 | | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. | 0.54 | B158DRAFT_1248 | | cytochrome d oxidase, subunit II (cydB) | low | > 40 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.15 | Xcc-8004.3040.1 | | Sensor histidine kinase PrrB (RegB) (EC 2.7.3.-) | 0.52 | Xcc-8004.4674.1 | | putative Cytochrome bd2, subunit II | low | > 74 |
Not shown: 2 genomes with orthologs for Psyr_4231 only; 40 genomes with orthologs for Psyr_4281 only