Conservation of cofitness between Psyr_1655 and Psyr_2974 in Pseudomonas syringae pv. syringae B728a

65 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_1655 TatD-related deoxyribonuclease 1.0 Psyr_2974 FAD-dependent pyridine nucleotide-disulfide oxidoreductase 0.52 1
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_1655 TatD-related deoxyribonuclease 1.00 Psyr_2974 FAD-dependent pyridine nucleotide-disulfide oxidoreductase 0.30 56
Pseudomonas fluorescens SBW25-INTG 0.89 PFLU_RS23020 TatD family hydrolase 0.79 PFLU_RS14575 alkyl hydroperoxide reductase subunit F low > 109
Pseudomonas fluorescens SBW25 0.89 PFLU_RS23020 TatD family hydrolase 0.79 PFLU_RS14575 alkyl hydroperoxide reductase subunit F low > 109
Pseudomonas fluorescens FW300-N2E2 0.89 Pf6N2E2_5960 Putative deoxyribonuclease YcfH 0.84 Pf6N2E2_448 Alkyl hydroperoxide reductase protein F (EC 1.6.4.-) low > 103
Pseudomonas simiae WCS417 0.89 PS417_21405 hydrolase TatD 0.81 PS417_14040 alkyl hydroperoxide reductase low > 88
Pseudomonas fluorescens FW300-N2C3 0.89 AO356_20205 hydrolase TatD 0.84 AO356_22810 alkyl hydroperoxide reductase subunit F low > 104
Pseudomonas sp. RS175 0.89 PFR28_03002 putative metal-dependent hydrolase YcfH 0.84 PFR28_02481 Alkyl hydroperoxide reductase subunit F low > 88
Pseudomonas fluorescens FW300-N2E3 0.88 AO353_01325 hydrolase TatD 0.86 AO353_26960 alkyl hydroperoxide reductase subunit F low > 101
Pseudomonas fluorescens GW456-L13 0.88 PfGW456L13_2112 Putative deoxyribonuclease YcfH 0.84 PfGW456L13_2928 Alkyl hydroperoxide reductase protein F (EC 1.6.4.-) low > 87
Pseudomonas sp. S08-1 0.86 OH686_22180 Uncharacterized metal-dependent hydrolase YcfH 0.74 OH686_18675 alkyl hydroperoxide reductase subunit F low > 80
Pseudomonas putida KT2440 0.85 PP_1967 tRNA D-aminoacylase 0.80 PP_2440 Alkyl hydroperoxide reductase subunit F low > 96
Pseudomonas fluorescens FW300-N1B4 0.84 Pf1N1B4_420 Putative deoxyribonuclease YcfH 0.84 Pf1N1B4_5010 Alkyl hydroperoxide reductase protein F (EC 1.6.4.-) low > 87
Pseudomonas stutzeri RCH2 0.84 Psest_1696 hydrolase, TatD family 0.76 Psest_0006 alkyl hydroperoxide reductase, F subunit low > 67
Kangiella aquimarina DSM 16071 0.56 B158DRAFT_1745 hydrolase, TatD family 0.43 B158DRAFT_0279 alkyl hydroperoxide reductase, F subunit low > 40
Shewanella amazonensis SB2B 0.53 Sama_2040 TatD family hydrolase (RefSeq) 0.62 Sama_0618 alkyl hydroperoxide reductase, F subunit (RefSeq) low > 62
Shewanella loihica PV-4 0.51 Shew_1582 TatD family hydrolase (RefSeq) 0.62 Shew_0793 FAD-dependent pyridine nucleotide-disulphide oxidoreductase (RefSeq) low > 60
Shewanella oneidensis MR-1 0.50 SO2610 hydrolase, TatD family (NCBI ptt file) 0.64 SO0956 ahpF alkyl hydroperoxide reductase, F subunit (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.50 Shewana3_1769 TatD family hydrolase (RefSeq) 0.64 Shewana3_3326 FAD-dependent pyridine nucleotide-disulphide oxidoreductase (RefSeq) low > 73
Alteromonas macleodii MIT1002 0.50 MIT1002_01740 putative deoxyribonuclease YcfH 0.47 MIT1002_01785 NADH dehydrogenase low > 70
Dickeya dianthicola ME23 0.49 DZA65_RS13620 metal-dependent hydrolase 0.63 DZA65_RS02570 alkyl hydroperoxide reductase subunit F low > 75
Dickeya dianthicola 67-19 0.49 HGI48_RS13150 metal-dependent hydrolase 0.63 HGI48_RS02465 alkyl hydroperoxide reductase subunit F low > 71
Dickeya dadantii 3937 0.49 DDA3937_RS13085 metal-dependent hydrolase 0.63 DDA3937_RS02520 alkyl hydroperoxide reductase subunit F low > 74
Pectobacterium carotovorum WPP14 0.47 HER17_RS08685 metal-dependent hydrolase 0.62 HER17_RS02550 alkyl hydroperoxide reductase subunit F low > 75
Dechlorosoma suillum PS 0.47 Dsui_2652 hydrolase, TatD family 0.71 Dsui_1902 alkyl hydroperoxide reductase, F subunit low > 51
Pantoea sp. MT58 0.47 IAI47_12035 metal-dependent hydrolase 0.63 IAI47_06795 alkyl hydroperoxide reductase subunit F low > 76
Klebsiella michiganensis M5al 0.47 BWI76_RS11125 metal-dependent hydrolase 0.66 BWI76_RS07945 alkyl hydroperoxide reductase subunit F 0.25 3
Ralstonia solanacearum GMI1000 0.47 RS_RS09020 TatD family deoxyribonuclease 0.69 RS_RS18340 alkyl hydroperoxide reductase subunit F low > 80
Ralstonia sp. UNC404CL21Col 0.46 ABZR87_RS12460 TatD family hydrolase 0.69 ABZR87_RS17240 alkyl hydroperoxide reductase subunit F low > 80
Ralstonia solanacearum PSI07 0.46 RPSI07_RS16465 TatD family deoxyribonuclease 0.70 RPSI07_RS00935 alkyl hydroperoxide reductase subunit F low > 81
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.46 GFF3382 Putative deoxyribonuclease YcfH 0.64 GFF4514 Alkyl hydroperoxide reductase protein F (EC 1.6.4.-) low > 78
Herbaspirillum seropedicae SmR1 0.46 HSERO_RS12995 DNAase 0.70 HSERO_RS21535 NADH dehydrogenase low > 78
Ralstonia solanacearum IBSBF1503 0.45 RALBFv3_RS01010 TatD family deoxyribonuclease 0.70 RALBFv3_RS22265 alkyl hydroperoxide reductase subunit F low > 76
Acinetobacter radioresistens SK82 0.45 MPMX26_01224 putative metal-dependent hydrolase YcfH 0.64 MPMX26_02013 Alkyl hydroperoxide reductase subunit F low > 36
Ralstonia solanacearum UW163 0.45 UW163_RS14320 TatD family deoxyribonuclease 0.70 UW163_RS22810 alkyl hydroperoxide reductase subunit F
Escherichia coli BW25113 0.45 b1100 ycfH predicted metallodependent hydrolase (NCBI) 0.64 b0606 ahpF alkyl hydroperoxide reductase, F52a subunit; detoxification of hydroperoxides (VIMSS) low > 76
Escherichia coli ECRC101 0.45 MCAODC_22900 ycfH metal-dependent hydrolase 0.64 MCAODC_26720 Alkyl hydroperoxide reductase subunit F low > 87
Escherichia coli BL21 0.45 ECD_01096 putative DNase 0.64 ECD_00575 alkyl hydroperoxide reductase, F52a subunit, FAD/NAD(P)-binding low > 61
Escherichia coli ECRC62 0.45 BNILDI_19230 ycfH metal-dependent hydrolase 0.64 BNILDI_21890 Alkyl hydroperoxide reductase subunit F low > 75
Escherichia coli ECRC102 0.45 NIAGMN_24290 ycfH metal-dependent hydrolase 0.64 NIAGMN_05560 Alkyl hydroperoxide reductase subunit F
Escherichia coli ECRC99 0.45 KEDOAH_24215 ycfH metal-dependent hydrolase 0.64 KEDOAH_20465 Alkyl hydroperoxide reductase subunit F
Escherichia coli Nissle 1917 0.45 ECOLIN_RS06350 metal-dependent hydrolase 0.64 ECOLIN_RS03325 alkyl hydroperoxide reductase subunit F low > 55
Escherichia coli ECRC100 0.45 OKFHMN_03540 ycfH metal-dependent hydrolase 0.64 OKFHMN_07505 Alkyl hydroperoxide reductase subunit F low > 80
Escherichia coli ECRC98 0.45 JDDGAC_07200 ycfH metal-dependent hydrolase 0.64 JDDGAC_11150 Alkyl hydroperoxide reductase subunit F low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.45 OHPLBJKB_02566 putative metal-dependent hydrolase YcfH 0.64 OHPLBJKB_03099 Alkyl hydroperoxide reductase subunit F low > 73
Escherichia coli ECOR27 0.45 NOLOHH_21070 ycfH metal-dependent hydrolase 0.64 NOLOHH_23880 Alkyl hydroperoxide reductase subunit F
Escherichia coli ECOR38 0.45 HEPCGN_23940 ycfH metal-dependent hydrolase 0.64 HEPCGN_00775 Alkyl hydroperoxide reductase subunit F low > 87
Enterobacter sp. TBS_079 0.45 MPMX20_01780 putative metal-dependent hydrolase YcfH 0.64 MPMX20_01272 Alkyl hydroperoxide reductase subunit F low > 85
Escherichia fergusonii Becca 0.45 EFB2_02875 putative metal-dependent hydrolase YcfH 0.64 EFB2_03485 Alkyl hydroperoxide reductase subunit F low > 86
Enterobacter asburiae PDN3 0.44 EX28DRAFT_1829 hydrolase, TatD family 0.64 EX28DRAFT_2349 alkyl hydroperoxide reductase subunit F low > 76
Castellaniella sp019104865 MT123 0.44 ABCV34_RS03960 TatD family hydrolase 0.68 ABCV34_RS09915 alkyl hydroperoxide reductase subunit F low > 48
Paraburkholderia bryophila 376MFSha3.1 0.43 H281DRAFT_00931 TatD DNase family protein 0.72 H281DRAFT_02889 alkyl hydroperoxide reductase subunit F
Paraburkholderia graminis OAS925 0.42 ABIE53_002166 TatD DNase family protein 0.72 ABIE53_005905 alkyl hydroperoxide reductase subunit F low > 113
Azospirillum brasilense Sp245 0.42 AZOBR_RS08795 LuxR family transcriptional regulator 0.74 AZOBR_RS20515 alkyl hydroperoxide reductase subunit F low > 97
Paraburkholderia sabiae LMG 24235 0.42 QEN71_RS21805 TatD family hydrolase 0.72 QEN71_RS13375 alkyl hydroperoxide reductase subunit F low > 153
Burkholderia phytofirmans PsJN 0.42 BPHYT_RS09640 DNAase 0.72 BPHYT_RS26840 NADH dehydrogenase low > 109
Variovorax sp. SCN45 0.42 GFF34 Uncharacterized metal-dependent hydrolase YcfH 0.69 GFF2825 Alkyl hydroperoxide reductase protein F 0.47 83
Azospirillum sp. SherDot2 0.42 MPMX19_01469 putative metal-dependent hydrolase YcfH 0.73 MPMX19_05836 Alkyl hydroperoxide reductase subunit F low > 112
Hydrogenophaga sp. GW460-11-11-14-LB1 0.40 GFF4665 Putative deoxyribonuclease YcfH 0.65 GFF3915 Alkyl hydroperoxide reductase protein F (EC 1.6.4.-) low > 90
Sphingomonas koreensis DSMZ 15582 0.40 Ga0059261_0126 hydrolase, TatD family 0.67 Ga0059261_0156 alkyl hydroperoxide reductase subunit F low > 68
Acidovorax sp. GW101-3H11 0.40 Ac3H11_2488 Putative deoxyribonuclease YcfH 0.66 Ac3H11_232 Alkyl hydroperoxide reductase protein F (EC 1.6.4.-) low > 79
Rhodospirillum rubrum S1H 0.39 Rru_A1700 TatD-related deoxyribonuclease (NCBI) 0.71 Rru_A1417 thioredoxin-disulfide reductase (NCBI) low > 58
Brevundimonas sp. GW460-12-10-14-LB2 0.34 A4249_RS04755 TatD family hydrolase 0.69 A4249_RS04545 alkyl hydroperoxide reductase subunit F low > 48
Marinobacter adhaerens HP15 0.31 HP15_3420 hydrolase, TatD family 0.67 HP15_3619 FAD-dependent pyridine nucleotide-disulfide oxidoreductase low > 73
Caulobacter crescentus NA1000 Δfur 0.29 CCNA_01898 Mg-dependent Dnase TatD 0.70 CCNA_03013 alkyl hydroperoxide reductase subunit F low > 67
Caulobacter crescentus NA1000 0.29 CCNA_01898 Mg-dependent Dnase TatD 0.70 CCNA_03013 alkyl hydroperoxide reductase subunit F low > 66

Not shown: 23 genomes with orthologs for Psyr_1655 only; 12 genomes with orthologs for Psyr_2974 only