| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas syringae pv. syringae B728a | 1.0 | Psyr_0090 | | 4-aminobutyrate aminotransferase apoenzyme | 1.0 | Psyr_2077 | | regulatory protein, LysR:LysR, substrate-binding protein | 0.34 | 16 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 1.00 | Psyr_0090 | | 4-aminobutyrate aminotransferase apoenzyme | 1.00 | Psyr_2077 | | regulatory protein, LysR:LysR, substrate-binding protein | low | > 86 |
| Pseudomonas lactucae CFBP13502 | 0.91 | GEMAOFIL_00404 | | 5-aminovalerate aminotransferase DavT | 0.94 | GEMAOFIL_01824 | | HTH-type transcriptional regulator CysB | low | > 96 |
| Pseudomonas segetis P6 | 0.91 | ACVTMO_RS02485 | gabT | 4-aminobutyrate--2-oxoglutarate transaminase | 0.92 | ACVTMO_RS13115 | cysB | HTH-type transcriptional regulator CysB | low | > 75 |
| Pseudomonas fluorescens SBW25-INTG | 0.90 | PFLU_RS00915 | | 4-aminobutyrate--2-oxoglutarate transaminase | 0.94 | PFLU_RS08410 | | HTH-type transcriptional regulator CysB | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.90 | PFLU_RS00915 | | 4-aminobutyrate--2-oxoglutarate transaminase | 0.94 | PFLU_RS08410 | | HTH-type transcriptional regulator CysB | low | > 109 |
| Pseudomonas fluorescens FW300-N2E3 | 0.90 | AO353_11510 | | 5-aminovalerate transaminase (EC 2.6.1.48) (from data) | 0.95 | AO353_19060 | | CysB family transcriptional regulator | 0.31 | 73 |
| Pseudomonas fluorescens FW300-N1B4 | 0.90 | Pf1N1B4_1733 | | 5-aminovalerate aminotransferase (EC 2.6.1.48) / Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) | 0.95 | Pf1N1B4_283 | | Cys regulon transcriptional activator CysB | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.90 | PfGW456L13_494 | | 5-aminovalerate aminotransferase (EC 2.6.1.48) / Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) | 0.95 | PfGW456L13_2230 | | Cys regulon transcriptional activator CysB | low | > 87 |
| Pseudomonas orientalis W4I3 | 0.90 | QF045_RS03960 | | 4-aminobutyrate--2-oxoglutarate transaminase | 0.94 | QF045_RS11180 | | HTH-type transcriptional regulator CysB | low | > 93 |
| Pseudomonas simiae WCS417 | 0.90 | PS417_00900 | | 4-aminobutyrate aminotransferase | 0.93 | PS417_08460 | | CysB family transcriptional regulator | — | — |
| Pseudomonas sp. RS175 | 0.90 | PFR28_04756 | | 5-aminovalerate aminotransferase DavT | 0.95 | PFR28_00966 | | HTH-type transcriptional regulator CysB | low | > 88 |
| Pseudomonas fluorescens FW300-N2E2 | 0.90 | Pf6N2E2_4013 | | 5-aminovalerate transaminase (EC 2.6.1.48) (from data) | 0.95 | Pf6N2E2_2465 | | Cys regulon transcriptional activator CysB | low | > 103 |
| Pseudomonas sp. DMC3 | 0.90 | GFF4255 | | 5-aminovalerate aminotransferase DavT | 0.94 | GFF4617 | | HTH-type transcriptional regulator CysB | low | > 89 |
| Pseudomonas fluorescens FW300-N2C3 | 0.89 | AO356_10715 | | 4-aminobutyrate aminotransferase | 0.95 | AO356_03180 | | CysB family transcriptional regulator | low | > 104 |
| Pseudomonas sp. BP01 | 0.88 | JOY50_RS18510 | gabT | 4-aminobutyrate--2-oxoglutarate transaminase | 0.93 | JOY50_RS25785 | cysB | HTH-type transcriptional regulator CysB | low | > 84 |
| Pseudomonas putida KT2440 | 0.87 | PP_0214 | | 4-aminobutyrate aminotransferase | 0.92 | PP_2327 | | transcriptional dual regulator / CysB-O-acetyl-L-serine | low | > 96 |
| Pseudomonas sp. SVBP6 | 0.87 | COO64_RS12480 | gabT | 4-aminobutyrate--2-oxoglutarate transaminase | 0.94 | COO64_RS09830 | cysB | HTH-type transcriptional regulator CysB | low | > 93 |
| Pseudomonas stutzeri RCH2 | 0.86 | Psest_3653 | | 4-aminobutyrate aminotransferase, prokaryotic type | 0.89 | Psest_2329 | | Transcriptional regulator | low | > 67 |
| Pseudomonas aeruginosa MRSN321 | 0.82 | DY961_RS21270 | gabT;go_function=4-aminobutyrate | 4-aminobutyrate--2-oxoglutarate transaminase | 0.91 | DY961_RS20450 | cysB;go_function=DNA-binding | HTH-type transcriptional regulator CysB | low | > 100 |
| Pseudomonas aeruginosa PUPa3 | 0.82 | DQ20_RS38015 | gabT;go_function=4-aminobutyrate | 4-aminobutyrate--2-oxoglutarate transaminase | 0.91 | DQ20_RS54540 | cysB;go_function=DNA-binding | HTH-type transcriptional regulator CysB | low | > 101 |
| Pseudomonas aeruginosa PA14 | 0.81 | IKLFDK_24130 | | 4-aminobutyrate--2-oxoglutarate transaminase | 0.91 | IKLFDK_08475 | | HTH-type transcriptional regulator CysB | low | > 98 |
| Pseudomonas sp. S08-1 | 0.79 | OH686_11880 | | 4-aminobutyrate transaminase | 0.92 | OH686_01730 | | Cys regulon transcriptional activator CysB | low | > 80 |
| Escherichia coli ECOR38 | 0.77 | HEPCGN_20155 | gabT | 4-aminobutyrate--2-oxoglutarate transaminase | 0.65 | HEPCGN_25600 | cysB | HTH-type transcriptional regulator CysB | low | > 88 |
| Escherichia coli ECRC100 | 0.76 | OKFHMN_20910 | gabT | 4-aminobutyrate--2-oxoglutarate transaminase | 0.65 | OKFHMN_02600 | cysB | HTH-type transcriptional regulator CysB | — | — |
| Escherichia coli ECRC99 | 0.76 | KEDOAH_07230 | gabT | 4-aminobutyrate--2-oxoglutarate transaminase | 0.65 | KEDOAH_26165 | cysB | HTH-type transcriptional regulator CysB | — | — |
| Escherichia coli ECRC101 | 0.76 | MCAODC_11430 | gabT | 4-aminobutyrate--2-oxoglutarate transaminase | 0.65 | MCAODC_15665 | cysB | HTH-type transcriptional regulator CysB | — | — |
| Escherichia coli ECRC102 | 0.76 | NIAGMN_18675 | gabT | 4-aminobutyrate--2-oxoglutarate transaminase | 0.65 | NIAGMN_26770 | cysB | HTH-type transcriptional regulator CysB | — | — |
| Escherichia coli ECRC98 | 0.76 | JDDGAC_24570 | gabT | 4-aminobutyrate--2-oxoglutarate transaminase | 0.65 | JDDGAC_05145 | cysB | HTH-type transcriptional regulator CysB | — | — |
| Klebsiella pneumoniae MKP103 | 0.76 | KDGMDA_13830 | | 4-aminobutyrate--2-oxoglutarate transaminase | 0.65 | KDGMDA_19620 | | HTH-type transcriptional regulator CysB | — | — |
| Escherichia fergusonii Becca | 0.76 | EFB2_01268 | | 4-aminobutyrate aminotransferase GabT | 0.65 | EFB2_02652 | | HTH-type transcriptional regulator CysB | — | — |
| Escherichia coli BW25113 | 0.76 | b2662 | gabT | 4-aminobutyrate aminotransferase (NCBI) | 0.65 | b1275 | cysB | DNA-binding transcriptional dual regulator, O-acetyl-L-serine-binding (NCBI) | — | — |
| Escherichia coli BL21 | 0.76 | ECD_02518 | | 4-aminobutyrate aminotransferase, PLP-dependent | 0.65 | ECD_01251 | | N-acetylserine-responsive cysteine regulon transcriptional activator; autorepressor | — | — |
| Escherichia coli Nissle 1917 | 0.76 | ECOLIN_RS14845 | | 4-aminobutyrate--2-oxoglutarate transaminase | 0.65 | ECOLIN_RS07680 | | HTH-type transcriptional regulator CysB | low | > 55 |
| Escherichia coli ECRC62 | 0.76 | BNILDI_11295 | gabT | 4-aminobutyrate--2-oxoglutarate transaminase | 0.65 | BNILDI_18415 | cysB | HTH-type transcriptional regulator CysB | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.76 | OHPLBJKB_01070 | | 4-aminobutyrate aminotransferase GabT | 0.65 | OHPLBJKB_02409 | | HTH-type transcriptional regulator CysB | low | > 74 |
| Escherichia coli ECOR27 | 0.76 | NOLOHH_12735 | gabT | 4-aminobutyrate--2-oxoglutarate transaminase | 0.65 | NOLOHH_20265 | cysB | HTH-type transcriptional regulator CysB | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.75 | GFF1567 | | Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) | 0.66 | GFF2712 | | Cys regulon transcriptional activator CysB | — | — |
| Shewanella amazonensis SB2B | 0.70 | Sama_2636 | | gamma-aminobutyrate transaminase (EC 2.6.1.19) (from data) | 0.64 | Sama_1324 | cysB | transcriptional regulator CysB (RefSeq) | — | — |
| Shewanella sp. ANA-3 | 0.68 | Shewana3_3091 | | 4-aminobutyrate aminotransferase (RefSeq) | 0.63 | Shewana3_1731 | cysB | transcriptional regulator CysB (RefSeq) | — | — |
| Variovorax sp. OAS795 | 0.67 | ABID97_RS21585 | | 4-aminobutyrate--2-oxoglutarate transaminase | 0.46 | ABID97_RS02980 | | CysB family HTH-type transcriptional regulator | low | > 91 |
| Shewanella oneidensis MR-1 | 0.67 | SO1276 | gabT | 4-aminobutyrate aminotransferase (NCBI ptt file) | 0.64 | SO2649 | cysB | cys regulon transcriptional activator (NCBI ptt file) | low | > 76 |
| Acidovorax sp. GW101-3H11 | 0.66 | Ac3H11_4179 | | Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) | 0.44 | Ac3H11_2403 | | Alkanesulfonate utilization operon LysR-family regulator CbI | low | > 79 |
| Cupriavidus basilensis FW507-4G11 | 0.58 | RR42_RS21370 | | 4-aminobutyrate aminotransferase | 0.45 | RR42_RS12245 | | transcriptional regulator | low | > 128 |
| Herbaspirillum seropedicae SmR1 | 0.56 | HSERO_RS05420 | | 4-aminobutyrate aminotransferase | 0.46 | HSERO_RS08245 | | CysB family transcriptional regulator | low | > 78 |
| Pectobacterium carotovorum WPP14 | 0.55 | HER17_RS09880 | | 4-aminobutyrate--2-oxoglutarate transaminase | 0.66 | HER17_RS10870 | | HTH-type transcriptional regulator CysB | low | > 75 |
| Paraburkholderia sabiae LMG 24235 | 0.55 | QEN71_RS19980 | | 4-aminobutyrate--2-oxoglutarate transaminase | 0.47 | QEN71_RS22570 | | CysB family HTH-type transcriptional regulator | low | > 153 |
| Ralstonia sp. UNC404CL21Col | 0.55 | ABZR87_RS05190 | | 4-aminobutyrate--2-oxoglutarate transaminase | 0.47 | ABZR87_RS11555 | | CysB family HTH-type transcriptional regulator | low | > 80 |
| Acinetobacter radioresistens SK82 | 0.54 | MPMX26_01998 | | 4-aminobutyrate aminotransferase PuuE | 0.39 | MPMX26_02171 | | HTH-type transcriptional regulator SsuR | low | > 36 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.54 | H281DRAFT_03179 | | 4-aminobutyrate aminotransferase apoenzyme | 0.47 | H281DRAFT_00782 | | transcriptional regulator, LysR family | low | > 103 |
| Ralstonia solanacearum PSI07 | 0.54 | RPSI07_RS23805 | | 4-aminobutyrate--2-oxoglutarate transaminase | 0.46 | RPSI07_RS17385 | | CysB family HTH-type transcriptional regulator | low | > 81 |
| Variovorax sp. SCN45 | 0.54 | GFF921 | | Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) | 0.47 | GFF3358 | | Alkanesulfonate utilization operon LysR-family regulator Cbl | low | > 127 |
| Ralstonia solanacearum GMI1000 | 0.53 | RS_RS00145 | | 4-aminobutyrate--2-oxoglutarate transaminase | 0.46 | RS_RS06760 | | CysB family HTH-type transcriptional regulator | low | > 80 |
| Enterobacter sp. TBS_079 | 0.53 | MPMX20_04337 | | 4-aminobutyrate aminotransferase PuuE | 0.66 | MPMX20_02501 | | HTH-type transcriptional regulator CysB | — | — |
| Enterobacter asburiae PDN3 | 0.53 | EX28DRAFT_4294 | | 4-aminobutyrate aminotransferase, prokaryotic type | 0.66 | EX28DRAFT_0946 | | Transcriptional regulator | — | — |
| Serratia liquefaciens MT49 | 0.53 | IAI46_22165 | | 4-aminobutyrate--2-oxoglutarate transaminase | 0.66 | IAI46_13965 | | HTH-type transcriptional regulator CysB | — | — |
| Dickeya dianthicola ME23 | 0.53 | DZA65_RS12405 | | 4-aminobutyrate--2-oxoglutarate transaminase | 0.66 | DZA65_RS11020 | | HTH-type transcriptional regulator CysB | low | > 75 |
| Paraburkholderia graminis OAS925 | 0.53 | ABIE53_004117 | | 4-aminobutyrate aminotransferase | 0.47 | ABIE53_001994 | | LysR family cys regulon transcriptional activator | low | > 113 |
| Burkholderia phytofirmans PsJN | 0.53 | BPHYT_RS22435 | | 4-aminobutyrate aminotransferase | 0.47 | BPHYT_RS08810 | | CysB family transcriptional regulator | low | > 109 |
| Pantoea agglomerans CFBP13505 P0401 | 0.53 | PagCFBP13505_RS07790 | | 4-aminobutyrate--2-oxoglutarate transaminase | 0.66 | PagCFBP13505_RS06945 | | HTH-type transcriptional regulator CysB | — | — |
| Klebsiella michiganensis M5al | 0.53 | BWI76_RS26375 | | aspartate aminotransferase family protein | 0.65 | BWI76_RS11930 | | LysR family transcriptional regulator CysB | — | — |
| Pantoea sp. MT58 | 0.52 | IAI47_19475 | | 4-aminobutyrate--2-oxoglutarate transaminase | 0.66 | IAI47_09240 | | HTH-type transcriptional regulator CysB | low | > 76 |
| Dickeya dianthicola 67-19 | 0.52 | HGI48_RS11860 | | 4-aminobutyrate--2-oxoglutarate transaminase | 0.66 | HGI48_RS10540 | | HTH-type transcriptional regulator CysB | low | > 71 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.52 | GFF2029 | | Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) | 0.48 | GFF5044 | | Alkanesulfonate utilization operon LysR-family regulator CbI | low | > 90 |
| Ralstonia solanacearum UW163 | 0.52 | UW163_RS04035 | | 4-aminobutyrate--2-oxoglutarate transaminase | 0.47 | UW163_RS13430 | | CysB family HTH-type transcriptional regulator | — | — |
| Dickeya dadantii 3937 | 0.52 | DDA3937_RS11830 | | 4-aminobutyrate--2-oxoglutarate transaminase | 0.66 | DDA3937_RS10540 | | HTH-type transcriptional regulator CysB | low | > 74 |
| Ralstonia solanacearum IBSBF1503 | 0.52 | RALBFv3_RS09545 | | 4-aminobutyrate--2-oxoglutarate transaminase | 0.47 | RALBFv3_RS00100 | | CysB family HTH-type transcriptional regulator | low | > 76 |
| Shewanella loihica PV-4 | 0.52 | Shew_3172 | | 4-aminobutyrate aminotransferase (RefSeq) | 0.63 | Shew_1624 | cysB | transcriptional regulator CysB (RefSeq) | — | — |
| Castellaniella sp019104865 MT123 | 0.51 | ABCV34_RS01765 | | 4-aminobutyrate--2-oxoglutarate transaminase | 0.38 | ABCV34_RS08230 | | CysB family HTH-type transcriptional regulator | low | > 48 |
| Acinetobacter baumannii LAC-4 | 0.51 | RR41_RS01110 | | 4-aminobutyrate--2-oxoglutarate transaminase | 0.40 | RR41_RS04770 | | CysB family HTH-type transcriptional regulator | — | — |
| Rahnella sp. WP5 | 0.51 | EX31_RS00095 | | 4-aminobutyrate--2-oxoglutarate transaminase | 0.66 | EX31_RS09890 | | HTH-type transcriptional regulator CysB | low | > 89 |
| Marinobacter adhaerens HP15 | 0.50 | HP15_3708 | | 4-aminobutyrate aminotransferase | 0.77 | HP15_1854 | | transcriptional regulator, LysR family | — | — |
| Erwinia amylovora T8 | 0.49 | OLJFJH_11345 | | 4-aminobutyrate--2-oxoglutarate transaminase | 0.65 | OLJFJH_13530 | | HTH-type transcriptional regulator CysB | low | > 58 |
| Lysobacter sp. OAE881 | 0.27 | ABIE51_RS02780 | | aspartate aminotransferase family protein | 0.33 | ABIE51_RS15850 | | LysR family transcriptional regulator | low | > 62 |
Not shown: 5 genomes with orthologs for Psyr_0090 only; 13 genomes with orthologs for Psyr_2077 only