Conservation of cofitness between Psyr_3511 and Psyr_0469 in Pseudomonas syringae pv. syringae B728a

62 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_3511 Response regulator receiver:Transcriptional regulatory protein, C-terminal 1.0 Psyr_0469 dihydroxyacid dehydratase 0.40 19
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_3511 Response regulator receiver:Transcriptional regulatory protein, C-terminal 1.00 Psyr_0469 dihydroxyacid dehydratase low > 86
Pseudomonas fluorescens SBW25 0.77 PFLU_RS25085 response regulator 0.95 PFLU_RS28535 dihydroxy-acid dehydratase low > 109
Pseudomonas fluorescens SBW25-INTG 0.77 PFLU_RS25085 response regulator 0.95 PFLU_RS28535 dihydroxy-acid dehydratase low > 109
Pseudomonas fluorescens FW300-N2C3 0.77 AO356_27280 XRE family transcriptional regulator 0.94 AO356_13250 dihydroxy-acid dehydratase low > 104
Pseudomonas sp. S08-1 0.73 OH686_04665 Two-component system response regulator QseB 0.92 OH686_14100 dihydroxy-acid dehydratase low > 80
Pseudomonas sp. RS175 0.73 PFR28_02328 Transcriptional regulatory protein QseB 0.95 PFR28_04278 Dihydroxy-acid dehydratase low > 88
Pseudomonas fluorescens GW456-L13 0.72 PfGW456L13_3169 Two-component system response regulator QseB 0.94 PfGW456L13_973 Dihydroxy-acid dehydratase (EC 4.2.1.9) low > 87
Pseudomonas fluorescens FW300-N2E2 0.71 Pf6N2E2_1539 Two-component system response regulator QseB 0.95 Pf6N2E2_4564 Dihydroxy-acid dehydratase (EC 4.2.1.9) low > 103
Pseudomonas fluorescens FW300-N1B4 0.71 Pf1N1B4_4454 Two-component system response regulator QseB 0.95 Pf1N1B4_2303 Dihydroxy-acid dehydratase (EC 4.2.1.9) — —
Pseudomonas putida KT2440 0.71 PP_2713 DNA-binding response regulator 0.94 PP_5128 Dihydroxy-acid dehydratase low > 96
Pseudomonas simiae WCS417 0.70 PS417_13595 XRE family transcriptional regulator 0.95 PS417_26890 dihydroxy-acid dehydratase low > 88
Pseudomonas stutzeri RCH2 0.69 Psest_3476 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 0.93 Psest_0234 dihydroxy-acid dehydratase — —
Paraburkholderia graminis OAS925 0.62 ABIE53_003418 two-component system response regulator QseB 0.80 ABIE53_006513 dihydroxy-acid dehydratase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.62 H281DRAFT_04180 two component transcriptional regulator, winged helix family 0.80 H281DRAFT_05312 dihydroxyacid dehydratase low > 103
Burkholderia phytofirmans PsJN 0.61 BPHYT_RS16220 transcriptional regulator 0.71 BPHYT_RS10100 dihydroxy-acid dehydratase — —
Paraburkholderia sabiae LMG 24235 0.60 QEN71_RS02475 response regulator 0.80 QEN71_RS21095 dihydroxy-acid dehydratase low > 153
Variovorax sp. SCN45 0.56 GFF1175 Two-component system response regulator QseB 0.30 GFF471 Dihydroxy-acid dehydratase (EC 4.2.1.9) — —
Variovorax sp. OAS795 0.56 ABID97_RS14955 response regulator 0.31 ABID97_RS17500 dihydroxy-acid dehydratase — —
Acidovorax sp. GW101-3H11 0.56 Ac3H11_3946 Two-component system response regulator QseB 0.79 Ac3H11_955 Dihydroxy-acid dehydratase (EC 4.2.1.9) low > 79
Hydrogenophaga sp. GW460-11-11-14-LB1 0.56 GFF700 Two-component system response regulator QseB 0.65 GFF2073 Dihydroxy-acid dehydratase (EC 4.2.1.9) low > 90
Herbaspirillum seropedicae SmR1 0.55 HSERO_RS21985 transcriptional regulator 0.72 HSERO_RS02650 dihydroxy-acid dehydratase low > 78
Ralstonia sp. UNC404CL21Col 0.54 ABZR87_RS22890 response regulator transcription factor 0.81 ABZR87_RS00240 dihydroxy-acid dehydratase low > 80
Cupriavidus basilensis FW507-4G11 0.54 RR42_RS37390 XRE family transcriptional regulator 0.29 RR42_RS16210 dihydroxy-acid dehydratase — —
Ralstonia solanacearum GMI1000 0.54 RS_RS24590 DNA-binding response regulator 0.29 RS_RS12105 dihydroxy-acid dehydratase — —
Dechlorosoma suillum PS 0.53 Dsui_2248 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain 0.75 Dsui_1122 dihydroxy-acid dehydratase — —
Erwinia tracheiphila SCR3 0.52 LU632_RS21175 pmrA two-component system response regulator PmrA 0.71 LU632_RS24400 ilvD dihydroxy-acid dehydratase low > 74
Ralstonia solanacearum UW163 0.52 UW163_RS17155 DNA-binding response regulator 0.29 UW163_RS09135 dihydroxy-acid dehydratase — —
Ralstonia solanacearum IBSBF1503 0.52 RALBFv3_RS16415 DNA-binding response regulator 0.29 RALBFv3_RS04535 dihydroxy-acid dehydratase — —
Ralstonia solanacearum PSI07 0.52 RPSI07_RS07290 DNA-binding response regulator 0.29 RPSI07_RS12840 dihydroxy-acid dehydratase — —
Rahnella sp. WP5 0.51 EX31_RS08605 two-component system response regulator PmrA 0.69 EX31_RS15005 dihydroxy-acid dehydratase 0.37 56
Pseudomonas fluorescens FW300-N2E3 0.50 AO353_23010 XRE family transcriptional regulator 0.95 AO353_08345 dihydroxy-acid dehydratase low > 101
Pantoea sp. MT58 0.50 IAI47_17605 response regulator 0.72 IAI47_01035 dihydroxy-acid dehydratase low > 76
Dickeya dianthicola 67-19 0.50 HGI48_RS21345 response regulator 0.73 HGI48_RS20295 dihydroxy-acid dehydratase low > 71
Rhodanobacter denitrificans FW104-10B01 0.49 LRK54_RS07600 response regulator 0.26 LRK54_RS10320 dihydroxy-acid dehydratase low > 59
Rhodanobacter denitrificans MT42 0.49 LRK55_RS07340 response regulator 0.25 LRK55_RS09960 dihydroxy-acid dehydratase low > 63
Rhodanobacter sp. FW510-T8 0.49 OKGIIK_14050 ompR DNA-binding response regulator 0.27 OKGIIK_13600 ilvD dihydroxy-acid dehydratase low > 52
Enterobacter asburiae PDN3 0.49 EX28DRAFT_3057 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 0.73 EX28DRAFT_4443 dihydroxy-acid dehydratase low > 76
Enterobacter sp. TBS_079 0.48 MPMX20_03863 Transcriptional regulatory protein QseB 0.73 MPMX20_04499 Dihydroxy-acid dehydratase low > 85
Acinetobacter radioresistens SK82 0.48 MPMX26_02034 Transcriptional regulatory protein QseB 0.29 MPMX26_03019 Dihydroxy-acid dehydratase — —
Castellaniella sp019104865 MT123 0.48 ABCV34_RS11770 response regulator 0.69 ABCV34_RS14810 dihydroxy-acid dehydratase low > 48
Dyella japonica UNC79MFTsu3.2 0.48 ABZR86_RS01270 response regulator 0.27 ABZR86_RS15945 dihydroxy-acid dehydratase low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.48 GFF1469 Transcriptional regulatory protein basR/pmrA 0.74 GFF2901 Dihydroxy-acid dehydratase (EC 4.2.1.9) low > 78
Vibrio cholerae E7946 ATCC 55056 0.47 CSW01_19595 DNA-binding response regulator 0.75 CSW01_00140 dihydroxy-acid dehydratase low > 62
Escherichia fergusonii Becca 0.47 EFB2_04469 Transcriptional regulatory protein BasR 0.74 EFB2_04865 Dihydroxy-acid dehydratase low > 86
Escherichia coli Nissle 1917 0.47 ECOLIN_RS23805 two-component system response regulator BasR 0.74 ECOLIN_RS21665 dihydroxy-acid dehydratase low > 55
Lysobacter sp. OAE881 0.47 ABIE51_RS00875 response regulator transcription factor 0.27 ABIE51_RS17540 dihydroxy-acid dehydratase low > 62
Escherichia coli ECOR27 0.47 NOLOHH_04835 basR two-component system response regulator BasR 0.74 NOLOHH_06775 ilvD dihydroxy-acid dehydratase low > 75
Escherichia coli ECRC99 0.47 KEDOAH_15595 basR two-component system response regulator BasR 0.74 KEDOAH_13510 ilvD dihydroxy-acid dehydratase — —
Escherichia coli ECRC62 0.47 BNILDI_06655 basR two-component system response regulator BasR 0.74 BNILDI_04750 ilvD dihydroxy-acid dehydratase low > 75
Escherichia coli ECRC102 0.47 NIAGMN_10415 basR two-component system response regulator BasR 0.74 NIAGMN_12395 ilvD dihydroxy-acid dehydratase — —
Escherichia coli ECRC100 0.47 OKFHMN_12570 basR two-component system response regulator BasR 0.74 OKFHMN_14640 ilvD dihydroxy-acid dehydratase low > 80
Escherichia coli ECRC98 0.47 JDDGAC_16205 basR two-component system response regulator BasR 0.74 JDDGAC_18260 ilvD dihydroxy-acid dehydratase low > 86
Escherichia coli ECRC101 0.47 MCAODC_03080 basR two-component system response regulator BasR 0.74 MCAODC_05145 ilvD dihydroxy-acid dehydratase low > 87
Marinobacter adhaerens HP15 0.46 HP15_3968 two component transcriptional regulator, winged helix family 0.78 HP15_595 dihydroxy-acid dehydratase low > 73
Pectobacterium carotovorum WPP14 0.46 HER17_RS21560 response regulator 0.74 HER17_RS01075 dihydroxy-acid dehydratase low > 75
Alteromonas macleodii MIT1002 0.46 MIT1002_00810 Transcriptional regulatory protein BasR 0.76 MIT1002_04041 Dihydroxy-acid dehydratase low > 70
Serratia liquefaciens MT49 0.45 IAI46_21235 response regulator 0.71 IAI46_24345 dihydroxy-acid dehydratase low > 86
Dickeya dadantii 3937 0.44 DDA3937_RS19350 two-component system response regulator PmrA 0.73 DDA3937_RS20155 dihydroxy-acid dehydratase low > 74
Shewanella sp. ANA-3 0.43 Shewana3_1885 two component transcriptional regulator (RefSeq) 0.74 Shewana3_0358 dihydroxy-acid dehydratase (RefSeq) low > 73
Brevundimonas sp. GW460-12-10-14-LB2 0.43 A4249_RS11495 response regulator transcription factor 0.25 A4249_RS10030 dihydroxy-acid dehydratase low > 48
Rhizobium sp. OAE497 0.43 ABIE40_RS17030 response regulator 0.75 ABIE40_RS08005 dihydroxy-acid dehydratase low > 107
Shewanella oneidensis MR-1 0.42 SO2104 DNA-binding response regulator YgiX, putative (NCBI ptt file) 0.74 SO4345 ilvD dihydroxy-acid dehydratase (NCBI ptt file) low > 76

Not shown: 0 genomes with orthologs for Psyr_3511 only; 39 genomes with orthologs for Psyr_0469 only