Conservation of cofitness between PP_5035 and PP_1088 in Pseudomonas putida KT2440

54 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_5035 Histidine utilization repressor 1.0 PP_1088 Argininosuccinate synthase 0.42 18
Pseudomonas syringae pv. syringae B728a 0.87 Psyr_0366 transcriptional regulator, GntR family 0.95 Psyr_3892 argininosuccinate synthase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.87 Psyr_0366 transcriptional regulator, GntR family 0.95 Psyr_3892 argininosuccinate synthase — —
Pseudomonas fluorescens GW456-L13 0.87 PfGW456L13_329 Histidine utilization repressor 0.96 PfGW456L13_1749 Argininosuccinate synthase (EC 6.3.4.5) low > 87
Pseudomonas fluorescens FW300-N2E3 0.87 AO353_12240 histidine utilization repressor 0.95 AO353_04105 argininosuccinate synthase low > 101
Pseudomonas fluorescens FW300-N1B4 0.87 Pf1N1B4_1590 Histidine utilization repressor 0.96 Pf1N1B4_742 Argininosuccinate synthase (EC 6.3.4.5) 0.43 38
Pseudomonas fluorescens FW300-N2C3 0.87 AO356_09640 histidine utilization repressor 0.95 AO356_18325 argininosuccinate synthase 0.40 39
Pseudomonas sp. RS175 0.87 PFR28_04963 HTH-type transcriptional repressor NagR 0.96 PFR28_03353 Argininosuccinate synthase — —
Pseudomonas fluorescens FW300-N2E2 0.86 Pf6N2E2_3807 Histidine utilization repressor 0.95 Pf6N2E2_5590 Argininosuccinate synthase (EC 6.3.4.5) — —
Pseudomonas fluorescens SBW25-INTG 0.84 PFLU_RS01765 histidine utilization repressor 0.96 PFLU_RS05725 argininosuccinate synthase — —
Pseudomonas fluorescens SBW25 0.84 PFLU_RS01765 histidine utilization repressor 0.96 PFLU_RS05725 argininosuccinate synthase — —
Pseudomonas simiae WCS417 0.84 PS417_01710 histidine utilization repressor 0.96 PS417_05640 argininosuccinate synthase — —
Dickeya dianthicola ME23 0.63 DZA65_RS15850 histidine utilization repressor 0.14 DZA65_RS00355 argininosuccinate synthase low > 75
Enterobacter sp. TBS_079 0.63 MPMX20_01398 HTH-type transcriptional repressor NagR 0.14 MPMX20_04077 Argininosuccinate synthase low > 85
Enterobacter asburiae PDN3 0.63 EX28DRAFT_2221 histidine utilization repressor, proteobacterial 0.14 EX28DRAFT_3224 argininosuccinate synthase (EC 6.3.4.5) low > 76
Dickeya dianthicola 67-19 0.63 HGI48_RS15100 histidine utilization repressor 0.14 HGI48_RS00355 argininosuccinate synthase low > 71
Klebsiella michiganensis M5al 0.63 BWI76_RS08730 histidine utilization repressor 0.14 BWI76_RS25115 argininosuccinate synthase low > 92
Dickeya dadantii 3937 0.62 DDA3937_RS15020 histidine utilization repressor 0.14 DDA3937_RS20890 argininosuccinate synthase low > 74
Serratia liquefaciens MT49 0.62 IAI46_10615 histidine utilization repressor 0.48 IAI46_24505 argininosuccinate synthase low > 86
Pantoea sp. MT58 0.62 IAI47_13270 histidine utilization repressor 0.46 IAI47_00915 argininosuccinate synthase 0.55 15
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.60 GFF665 Histidine utilization repressor 0.13 GFF2913 Argininosuccinate synthase (EC 6.3.4.5) low > 78
Rahnella sp. WP5 0.60 EX31_RS06725 histidine utilization repressor 0.15 EX31_RS13445 argininosuccinate synthase low > 89
Rhizobium sp. OAE497 0.57 ABIE40_RS23900 histidine utilization repressor 0.68 ABIE40_RS18150 argininosuccinate synthase — —
Sinorhizobium meliloti 1021 0.57 SMc00674 histidine utilization repressor transcription regulator protein 0.68 SMc03826 argininosuccinate synthase 0.25 68
Variovorax sp. SCN45 0.47 GFF6410 Histidine utilization repressor 0.14 GFF3096 Argininosuccinate synthase (EC 6.3.4.5) — —
Variovorax sp. OAS795 0.47 ABID97_RS03415 histidine utilization repressor 0.14 ABID97_RS21670 argininosuccinate synthase — —
Cupriavidus basilensis FW507-4G11 0.47 RR42_RS16925 histidine utilization repressor 0.77 RR42_RS17170 argininosuccinate synthase — —
Shewanella loihica PV-4 0.46 Shew_3758 histidine utilization repressor (RefSeq) 0.48 Shew_0205 argininosuccinate synthase (RefSeq) low > 60
Shewanella sp. ANA-3 0.46 Shewana3_0099 histidine utilization repressor (RefSeq) 0.46 Shewana3_3902 argininosuccinate synthase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.45 SO0096 hutC histidine utilization repressor (NCBI ptt file) 0.46 SO0278 argG argininosuccinate synthase (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.45 Sama_0081 histidine utilization repressor (RefSeq) 0.46 Sama_0259 argininosuccinate synthase (RefSeq) low > 62
Azospirillum sp. SherDot2 0.45 MPMX19_04937 Mannosyl-D-glycerate transport/metabolism system repressor MngR 0.72 MPMX19_02369 Argininosuccinate synthase — —
Acidovorax sp. GW101-3H11 0.45 Ac3H11_2559 Histidine utilization repressor 0.14 Ac3H11_2616 Argininosuccinate synthase (EC 6.3.4.5) — —
Paraburkholderia sabiae LMG 24235 0.44 QEN71_RS07755 histidine utilization repressor 0.14 QEN71_RS09235 argininosuccinate synthase low > 153
Paraburkholderia bryophila 376MFSha3.1 0.44 H281DRAFT_05296 GntR family transcriptional regulator, histidine utilization repressor 0.76 H281DRAFT_04120 argininosuccinate synthase low > 103
Rhodospirillum rubrum S1H 0.44 Rru_A1294 Transcriptional Regulator, Histidine utilization repressor, GntR family (NCBI) 0.72 Rru_A3751 Argininosuccinate synthase (NCBI) low > 58
Ralstonia sp. UNC404CL21Col 0.43 ABZR87_RS01035 histidine utilization repressor 0.14 ABZR87_RS00835 argininosuccinate synthase low > 80
Burkholderia phytofirmans PsJN 0.43 BPHYT_RS07560 histidine utilization repressor 0.76 BPHYT_RS15920 argininosuccinate synthase — —
Ralstonia solanacearum PSI07 0.43 RPSI07_RS11905 histidine utilization repressor 0.14 RPSI07_RS12120 argininosuccinate synthase — —
Paraburkholderia graminis OAS925 0.43 ABIE53_001730 GntR family histidine utilization transcriptional repressor 0.76 ABIE53_003355 argininosuccinate synthase — —
Kangiella aquimarina DSM 16071 0.43 B158DRAFT_1434 histidine utilization repressor, proteobacterial 0.21 B158DRAFT_1976 argininosuccinate synthase (EC 6.3.4.5) low > 40
Ralstonia solanacearum IBSBF1503 0.43 RALBFv3_RS05400 histidine utilization repressor 0.14 RALBFv3_RS05180 argininosuccinate synthase — —
Ralstonia solanacearum UW163 0.43 UW163_RS08225 histidine utilization repressor 0.14 UW163_RS08445 argininosuccinate synthase — —
Ralstonia solanacearum GMI1000 0.42 RS_RS13260 histidine utilization repressor 0.14 RS_RS12800 argininosuccinate synthase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.42 GFF3591 Histidine utilization repressor 0.13 GFF294 Argininosuccinate synthase (EC 6.3.4.5) — —
Pseudomonas sp. S08-1 0.41 OH686_16760 histidine utilization repressor 0.95 OH686_03930 argininosuccinate synthase low > 80
Vibrio cholerae E7946 ATCC 55056 0.41 CSW01_06100 histidine utilization repressor 0.48 CSW01_13370 argininosuccinate synthase low > 62
Castellaniella sp019104865 MT123 0.37 ABCV34_RS12825 histidine utilization repressor 0.14 ABCV34_RS05390 argininosuccinate synthase — —
Bosea sp. OAE506 0.34 ABIE41_RS23630 histidine utilization repressor 0.67 ABIE41_RS00340 argininosuccinate synthase — —
Caulobacter crescentus NA1000 Δfur 0.29 CCNA_01013 histidine utilization repressor 0.67 CCNA_00128 argininosuccinate synthase low > 67
Caulobacter crescentus NA1000 0.29 CCNA_01013 histidine utilization repressor 0.67 CCNA_00128 argininosuccinate synthase — —
Xanthomonas campestris pv. campestris strain 8004 0.26 Xcc-8004.3293.1 Histidine utilization repressor 0.21 Xcc-8004.2318.1 Argininosuccinate synthase (EC 6.3.4.5) low > 74
Sphingomonas koreensis DSMZ 15582 0.26 Ga0059261_3966 Transcriptional regulators 0.66 Ga0059261_1393 argininosuccinate synthase (EC 6.3.4.5) 0.57 43
Brevundimonas sp. GW460-12-10-14-LB2 0.25 A4249_RS06610 histidine utilization repressor 0.67 A4249_RS14275 argininosuccinate synthase low > 48
Phaeobacter inhibens DSM 17395 0.18 PGA1_c36370 HTH-type transcriptional regulator, GntR family 0.67 PGA1_c34920 argininosuccinate synthase ArgG — —

Not shown: 0 genomes with orthologs for PP_5035 only; 48 genomes with orthologs for PP_1088 only