Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Pseudomonas fluorescens SBW25 | 1.0 | PFLU_RS08655 | | heme ABC transporter permease | 1.0 | PFLU_RS08665 | | cytochrome c maturation protein CcmE | 0.60 | 11 |
Pseudomonas fluorescens SBW25-INTG | 1.00 | PFLU_RS08655 | | heme ABC transporter permease | 1.00 | PFLU_RS08665 | | cytochrome c maturation protein CcmE | 0.90 | 2 |
Pseudomonas simiae WCS417 | 0.98 | PS417_08700 | | heme ABC transporter permease | 0.99 | PS417_08710 | | cytochrome C biogenesis protein CcmE | — | — |
Pseudomonas fluorescens FW300-N2E3 | 0.96 | AO353_18860 | | heme ABC transporter permease | 0.95 | AO353_18870 | | cytochrome C biogenesis protein CcmE | — | — |
Pseudomonas fluorescens FW300-N2E2 | 0.95 | Pf6N2E2_2558 | | Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE | 0.93 | Pf6N2E2_2556 | | Cytochrome c-type biogenesis protein CcmE, heme chaperone | — | — |
Pseudomonas fluorescens FW300-N2C3 | 0.95 | AO356_03650 | | heme ABC transporter permease | 0.92 | AO356_03640 | | cytochrome C biogenesis protein CcmE | — | — |
Pseudomonas sp. RS175 | 0.94 | PFR28_00867 | | Heme exporter protein C | 0.94 | PFR28_00869 | | Cytochrome c-type biogenesis protein CcmE | — | — |
Pseudomonas fluorescens FW300-N1B4 | 0.94 | Pf1N1B4_3641 | | Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE | 0.95 | Pf1N1B4_3643 | | Cytochrome c-type biogenesis protein CcmE, heme chaperone | — | — |
Pseudomonas fluorescens GW456-L13 | 0.94 | PfGW456L13_4314 | | Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE | 0.95 | PfGW456L13_4312 | | Cytochrome c-type biogenesis protein CcmE, heme chaperone | — | — |
Pseudomonas putida KT2440 | 0.87 | PP_4325 | | protoheme IX reservoir complex subunit | 0.78 | PP_4323 | | Cytochrome c-type biogenesis protein CcmE | — | — |
Pseudomonas syringae pv. syringae B728a | 0.86 | Psyr_3391 | | Cytochrome c-type biogenesis protein CcmC | 0.89 | Psyr_3389 | | CcmE/CycJ protein | — | — |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.86 | Psyr_3391 | | Cytochrome c-type biogenesis protein CcmC | 0.89 | Psyr_3389 | | CcmE/CycJ protein | — | — |
Pseudomonas stutzeri RCH2 | 0.85 | Psest_1756 | | heme exporter protein CcmC | 0.76 | Psest_1758 | | Cytochrome c-type biogenesis protein CcmE | — | — |
Pseudomonas sp. S08-1 | 0.75 | OH686_02650 | | Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE | 0.81 | OH686_02640 | | Cytochrome c-type biogenesis protein CcmE, heme chaperone | — | — |
Marinobacter adhaerens HP15 | 0.59 | HP15_2284 | | heme exporter protein CcmC | 0.65 | HP15_2282 | | cytochrome c-type biogenesis protein CcmE | — | — |
Vibrio cholerae E7946 ATCC 55056 | 0.55 | CSW01_10280 | | heme exporter protein C | 0.50 | CSW01_10270 | | cytochrome c-type biogenesis protein CcmE | 0.83 | 45 |
Shewanella oneidensis MR-1 | 0.53 | SO0261 | ccmC | heme exporter protein CcmC (NCBI ptt file) | 0.46 | SO0259 | ccmE | cytochrome c biogenesis protein CcmE (NCBI ptt file) | 0.70 | 7 |
Shewanella sp. ANA-3 | 0.53 | Shewana3_0229 | | heme exporter protein CcmC (RefSeq) | 0.46 | Shewana3_0227 | | cytochrome c-type biogenesis protein CcmE (RefSeq) | — | — |
Alteromonas macleodii MIT1002 | 0.52 | MIT1002_00962 | | Cytochrome c-type biogenesis protein CcmC | 0.46 | MIT1002_00964 | | Heme chaperone CcmE | — | — |
Shewanella loihica PV-4 | 0.52 | Shew_0188 | | heme exporter protein CcmC (RefSeq) | 0.44 | Shew_0186 | | cytochrome c-type biogenesis protein CcmE (RefSeq) | — | — |
Shewanella amazonensis SB2B | 0.51 | Sama_0243 | | heme exporter protein CcmC (RefSeq) | 0.47 | Sama_0241 | | cytochrome c-type biogenesis protein CcmE (RefSeq) | 0.87 | 7 |
Kangiella aquimarina DSM 16071 | 0.49 | B158DRAFT_1325 | | heme exporter protein CcmC | 0.46 | B158DRAFT_1327 | | Cytochrome c-type biogenesis protein CcmE | 0.97 | 5 |
Rahnella sp. WP5 | 0.49 | EX31_RS19760 | | heme ABC transporter permease | 0.50 | EX31_RS19750 | | cytochrome c maturation protein CcmE | low | > 89 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.48 | OHPLBJKB_01512 | | Heme exporter protein C | 0.47 | OHPLBJKB_01514 | | Cytochrome c-type biogenesis protein CcmE | low | > 73 |
Escherichia coli BL21 | 0.48 | ECD_02126 | | heme export ABC transporter permease; CcmE-interacting protein | 0.47 | ECD_02124 | | periplasmic heme chaperone | low | > 61 |
Escherichia coli ECOR27 | 0.48 | NOLOHH_14865 | ccmC | heme exporter protein CcmC | 0.47 | NOLOHH_14875 | ccmE | cytochrome c maturation protein CcmE | low | > 75 |
Escherichia coli ECRC102 | 0.48 | NIAGMN_21055 | ccmC | heme exporter protein CcmC | 0.47 | NIAGMN_21065 | ccmE | cytochrome c maturation protein CcmE | — | — |
Escherichia coli ECRC101 | 0.48 | MCAODC_14340 | ccmC | heme exporter protein CcmC | 0.47 | MCAODC_14350 | ccmE | cytochrome c maturation protein CcmE | low | > 87 |
Escherichia coli ECRC99 | 0.48 | KEDOAH_04895 | ccmC | heme exporter protein CcmC | 0.47 | KEDOAH_04885 | ccmE | cytochrome c maturation protein CcmE | — | — |
Escherichia coli BW25113 | 0.48 | b2199 | ccmC | heme exporter subunit (NCBI) | 0.47 | b2197 | ccmE | periplasmic heme chaperone (NCBI) | low | > 76 |
Escherichia coli ECRC98 | 0.48 | JDDGAC_27250 | ccmC | heme exporter protein CcmC | 0.47 | JDDGAC_27260 | ccmE | cytochrome c maturation protein CcmE | low | > 86 |
Escherichia fergusonii Becca | 0.48 | EFB2_01657 | | Heme exporter protein C | 0.47 | EFB2_01659 | | Cytochrome c-type biogenesis protein CcmE | low | > 86 |
Escherichia coli ECRC100 | 0.48 | OKFHMN_23290 | ccmC | heme exporter protein CcmC | 0.47 | OKFHMN_23300 | ccmE | cytochrome c maturation protein CcmE | low | > 80 |
Escherichia coli ECOR38 | 0.48 | HEPCGN_22555 | ccmC | heme exporter protein CcmC | 0.47 | HEPCGN_22565 | ccmE | cytochrome c maturation protein CcmE | low | > 87 |
Escherichia coli Nissle 1917 | 0.48 | ECOLIN_RS12850 | | heme exporter protein CcmC | 0.47 | ECOLIN_RS12840 | | cytochrome c maturation protein CcmE | — | — |
Escherichia coli ECRC62 | 0.48 | BNILDI_13785 | ccmC | heme exporter protein CcmC | 0.47 | BNILDI_13795 | ccmE | cytochrome c maturation protein CcmE | low | > 75 |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.47 | GFF4880 | | Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE | 0.47 | GFF4878 | | Cytochrome c-type biogenesis protein CcmE, heme chaperone | — | — |
Serratia liquefaciens MT49 | 0.46 | IAI46_18100 | | heme ABC transporter permease | 0.49 | IAI46_18090 | | cytochrome c maturation protein CcmE | low | > 86 |
Pectobacterium carotovorum WPP14 | 0.46 | HER17_RS09040 | | heme ABC transporter permease | 0.48 | HER17_RS09050 | | cytochrome c maturation protein CcmE | low | > 75 |
Pantoea sp. MT58 | 0.46 | IAI47_06075 | | heme ABC transporter permease | 0.39 | IAI47_06085 | | cytochrome c maturation protein CcmE | 0.44 | 7 |
Azospirillum brasilense Sp245 | 0.46 | AZOBR_RS00725 | | heme ABC transporter (exporter) permease component | 0.36 | AZOBR_RS00735 | | cytochrome C biogenesis protein CcmE | — | — |
Magnetospirillum magneticum AMB-1 | 0.45 | AMB_RS21235 | | heme transporter HemC | 0.43 | AMB_RS21245 | | cytochrome c-type biogenesis protein CcmE | — | — |
Azospirillum sp. SherDot2 | 0.45 | MPMX19_02530 | | Heme exporter protein C | 0.43 | MPMX19_02532 | | Cytochrome c-type biogenesis protein CcmE | — | — |
Dyella japonica UNC79MFTsu3.2 | 0.45 | ABZR86_RS06430 | | heme ABC transporter permease | 0.43 | ABZR86_RS06440 | | cytochrome c maturation protein CcmE | — | — |
Dechlorosoma suillum PS | 0.44 | Dsui_1169 | | heme exporter protein CcmC | 0.48 | Dsui_1171 | | cytochrome c-type biogenesis protein CcmE | — | — |
Xanthomonas campestris pv. campestris strain 8004 | 0.44 | Xcc-8004.2345.1 | | Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE | 0.45 | Xcc-8004.3189.1 | | Cytochrome c-type biogenesis protein CcmE, heme chaperone | — | — |
Agrobacterium fabrum C58 | 0.43 | Atu2688 | | ABC transporter, membrane spanning protein (heme) | 0.38 | Atu0974 | | cytochrome-c biosynthesis heme-carrier protein cycJ | — | — |
Sinorhizobium meliloti 1021 | 0.43 | SMc03849 | | heme exporter C (cytochrome C-type biogenesis protein) transmembrane | 0.39 | SMc02362 | | cytochrome c-type biogenesis protein CcmE | 0.30 | 33 |
Rhizobium sp. OAE497 | 0.42 | ABIE40_RS18290 | | heme ABC transporter permease | 0.35 | ABIE40_RS05680 | | cytochrome c maturation protein CcmE | 0.93 | 3 |
Rhodanobacter denitrificans FW104-10B01 | 0.42 | LRK54_RS16080 | | heme ABC transporter permease | 0.39 | LRK54_RS16070 | | cytochrome c maturation protein CcmE | — | — |
Rhodanobacter denitrificans MT42 | 0.42 | LRK55_RS15830 | | heme ABC transporter permease | 0.39 | LRK55_RS15820 | | cytochrome c maturation protein CcmE | — | — |
Rhodanobacter sp. FW510-T8 | 0.41 | OKGIIK_08570 | ccmC | heme ABC transporter permease | 0.41 | OKGIIK_08580 | ccmE | cytochrome c maturation protein CcmE | — | — |
Rhodospirillum rubrum S1H | 0.41 | Rru_A0038 | | Cytochrome c-type biogenesis protein CcmC (NCBI) | 0.44 | Rru_A0036 | | CcmE/CycJ protein (NCBI) | — | — |
Lysobacter sp. OAE881 | 0.41 | ABIE51_RS08715 | | heme ABC transporter permease CcmC | 0.48 | ABIE51_RS08705 | | cytochrome c maturation protein CcmE | 0.97 | 2 |
Caulobacter crescentus NA1000 | 0.40 | CCNA_03786 | | heme chaperone heme-lyase | 0.43 | CCNA_02849 | | cytochrome c-type biogenesis heme chaperone | 0.91 | 1 |
Caulobacter crescentus NA1000 Δfur | 0.40 | CCNA_03786 | | heme chaperone heme-lyase | 0.43 | CCNA_02849 | | cytochrome c-type biogenesis heme chaperone | low | > 67 |
Rhodopseudomonas palustris CGA009 | 0.38 | TX73_001060 | | heme ABC transporter permease | 0.43 | TX73_009895 | | cytochrome c maturation protein CcmE | — | — |
Sphingomonas koreensis DSMZ 15582 | 0.37 | Ga0059261_0175 | | heme exporter protein CcmC | 0.46 | Ga0059261_0173 | | Cytochrome c-type biogenesis protein CcmE | — | — |
Dinoroseobacter shibae DFL-12 | 0.36 | Dshi_1853 | | heme exporter protein CcmC (RefSeq) | 0.36 | Dshi_1758 | | CcmE/CycJ protein (RefSeq) | — | — |
Phaeobacter inhibens DSM 17395 | 0.35 | PGA1_c18870 | | heme exporter protein C | 0.35 | PGA1_c17040 | | cytochrome c-type biogenesis protein CcmE | — | — |
Brevundimonas sp. GW460-12-10-14-LB2 | 0.35 | A4249_RS12785 | | heme ABC transporter permease | 0.45 | A4249_RS10830 | | cytochrome c maturation protein CcmE | — | — |
Not shown: 1 genomes with orthologs for PFLU_RS08655 only; 0 genomes with orthologs for PFLU_RS08665 only