Conservation of cofitness between PFLU_RS08655 and PFLU_RS08665 in Pseudomonas fluorescens SBW25

60 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens SBW25 1.0 PFLU_RS08655 heme ABC transporter permease 1.0 PFLU_RS08665 cytochrome c maturation protein CcmE 0.60 11
Pseudomonas fluorescens SBW25-INTG 1.00 PFLU_RS08655 heme ABC transporter permease 1.00 PFLU_RS08665 cytochrome c maturation protein CcmE 0.90 2
Pseudomonas simiae WCS417 0.98 PS417_08700 heme ABC transporter permease 0.99 PS417_08710 cytochrome C biogenesis protein CcmE
Pseudomonas fluorescens FW300-N2E3 0.96 AO353_18860 heme ABC transporter permease 0.95 AO353_18870 cytochrome C biogenesis protein CcmE
Pseudomonas fluorescens FW300-N2E2 0.95 Pf6N2E2_2558 Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE 0.93 Pf6N2E2_2556 Cytochrome c-type biogenesis protein CcmE, heme chaperone
Pseudomonas fluorescens FW300-N2C3 0.95 AO356_03650 heme ABC transporter permease 0.92 AO356_03640 cytochrome C biogenesis protein CcmE
Pseudomonas sp. RS175 0.94 PFR28_00867 Heme exporter protein C 0.94 PFR28_00869 Cytochrome c-type biogenesis protein CcmE
Pseudomonas fluorescens FW300-N1B4 0.94 Pf1N1B4_3641 Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE 0.95 Pf1N1B4_3643 Cytochrome c-type biogenesis protein CcmE, heme chaperone
Pseudomonas fluorescens GW456-L13 0.94 PfGW456L13_4314 Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE 0.95 PfGW456L13_4312 Cytochrome c-type biogenesis protein CcmE, heme chaperone
Pseudomonas putida KT2440 0.87 PP_4325 protoheme IX reservoir complex subunit 0.78 PP_4323 Cytochrome c-type biogenesis protein CcmE
Pseudomonas syringae pv. syringae B728a 0.86 Psyr_3391 Cytochrome c-type biogenesis protein CcmC 0.89 Psyr_3389 CcmE/CycJ protein
Pseudomonas syringae pv. syringae B728a ΔmexB 0.86 Psyr_3391 Cytochrome c-type biogenesis protein CcmC 0.89 Psyr_3389 CcmE/CycJ protein
Pseudomonas stutzeri RCH2 0.85 Psest_1756 heme exporter protein CcmC 0.76 Psest_1758 Cytochrome c-type biogenesis protein CcmE
Pseudomonas sp. S08-1 0.75 OH686_02650 Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE 0.81 OH686_02640 Cytochrome c-type biogenesis protein CcmE, heme chaperone
Marinobacter adhaerens HP15 0.59 HP15_2284 heme exporter protein CcmC 0.65 HP15_2282 cytochrome c-type biogenesis protein CcmE
Vibrio cholerae E7946 ATCC 55056 0.55 CSW01_10280 heme exporter protein C 0.50 CSW01_10270 cytochrome c-type biogenesis protein CcmE 0.83 45
Shewanella oneidensis MR-1 0.53 SO0261 ccmC heme exporter protein CcmC (NCBI ptt file) 0.46 SO0259 ccmE cytochrome c biogenesis protein CcmE (NCBI ptt file) 0.70 7
Shewanella sp. ANA-3 0.53 Shewana3_0229 heme exporter protein CcmC (RefSeq) 0.46 Shewana3_0227 cytochrome c-type biogenesis protein CcmE (RefSeq)
Alteromonas macleodii MIT1002 0.52 MIT1002_00962 Cytochrome c-type biogenesis protein CcmC 0.46 MIT1002_00964 Heme chaperone CcmE
Shewanella loihica PV-4 0.52 Shew_0188 heme exporter protein CcmC (RefSeq) 0.44 Shew_0186 cytochrome c-type biogenesis protein CcmE (RefSeq)
Shewanella amazonensis SB2B 0.51 Sama_0243 heme exporter protein CcmC (RefSeq) 0.47 Sama_0241 cytochrome c-type biogenesis protein CcmE (RefSeq) 0.87 7
Kangiella aquimarina DSM 16071 0.49 B158DRAFT_1325 heme exporter protein CcmC 0.46 B158DRAFT_1327 Cytochrome c-type biogenesis protein CcmE 0.97 5
Rahnella sp. WP5 0.49 EX31_RS19760 heme ABC transporter permease 0.50 EX31_RS19750 cytochrome c maturation protein CcmE low > 89
Escherichia coli HS(pFamp)R (ATCC 700891) 0.48 OHPLBJKB_01512 Heme exporter protein C 0.47 OHPLBJKB_01514 Cytochrome c-type biogenesis protein CcmE low > 73
Escherichia coli BL21 0.48 ECD_02126 heme export ABC transporter permease; CcmE-interacting protein 0.47 ECD_02124 periplasmic heme chaperone low > 61
Escherichia coli ECOR27 0.48 NOLOHH_14865 ccmC heme exporter protein CcmC 0.47 NOLOHH_14875 ccmE cytochrome c maturation protein CcmE low > 75
Escherichia coli ECRC102 0.48 NIAGMN_21055 ccmC heme exporter protein CcmC 0.47 NIAGMN_21065 ccmE cytochrome c maturation protein CcmE
Escherichia coli ECRC101 0.48 MCAODC_14340 ccmC heme exporter protein CcmC 0.47 MCAODC_14350 ccmE cytochrome c maturation protein CcmE low > 87
Escherichia coli ECRC99 0.48 KEDOAH_04895 ccmC heme exporter protein CcmC 0.47 KEDOAH_04885 ccmE cytochrome c maturation protein CcmE
Escherichia coli BW25113 0.48 b2199 ccmC heme exporter subunit (NCBI) 0.47 b2197 ccmE periplasmic heme chaperone (NCBI) low > 76
Escherichia coli ECRC98 0.48 JDDGAC_27250 ccmC heme exporter protein CcmC 0.47 JDDGAC_27260 ccmE cytochrome c maturation protein CcmE low > 86
Escherichia fergusonii Becca 0.48 EFB2_01657 Heme exporter protein C 0.47 EFB2_01659 Cytochrome c-type biogenesis protein CcmE low > 86
Escherichia coli ECRC100 0.48 OKFHMN_23290 ccmC heme exporter protein CcmC 0.47 OKFHMN_23300 ccmE cytochrome c maturation protein CcmE low > 80
Escherichia coli ECOR38 0.48 HEPCGN_22555 ccmC heme exporter protein CcmC 0.47 HEPCGN_22565 ccmE cytochrome c maturation protein CcmE low > 87
Escherichia coli Nissle 1917 0.48 ECOLIN_RS12850 heme exporter protein CcmC 0.47 ECOLIN_RS12840 cytochrome c maturation protein CcmE
Escherichia coli ECRC62 0.48 BNILDI_13785 ccmC heme exporter protein CcmC 0.47 BNILDI_13795 ccmE cytochrome c maturation protein CcmE low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.47 GFF4880 Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE 0.47 GFF4878 Cytochrome c-type biogenesis protein CcmE, heme chaperone
Serratia liquefaciens MT49 0.46 IAI46_18100 heme ABC transporter permease 0.49 IAI46_18090 cytochrome c maturation protein CcmE low > 86
Pectobacterium carotovorum WPP14 0.46 HER17_RS09040 heme ABC transporter permease 0.48 HER17_RS09050 cytochrome c maturation protein CcmE low > 75
Pantoea sp. MT58 0.46 IAI47_06075 heme ABC transporter permease 0.39 IAI47_06085 cytochrome c maturation protein CcmE 0.44 7
Azospirillum brasilense Sp245 0.46 AZOBR_RS00725 heme ABC transporter (exporter) permease component 0.36 AZOBR_RS00735 cytochrome C biogenesis protein CcmE
Magnetospirillum magneticum AMB-1 0.45 AMB_RS21235 heme transporter HemC 0.43 AMB_RS21245 cytochrome c-type biogenesis protein CcmE
Azospirillum sp. SherDot2 0.45 MPMX19_02530 Heme exporter protein C 0.43 MPMX19_02532 Cytochrome c-type biogenesis protein CcmE
Dyella japonica UNC79MFTsu3.2 0.45 ABZR86_RS06430 heme ABC transporter permease 0.43 ABZR86_RS06440 cytochrome c maturation protein CcmE
Dechlorosoma suillum PS 0.44 Dsui_1169 heme exporter protein CcmC 0.48 Dsui_1171 cytochrome c-type biogenesis protein CcmE
Xanthomonas campestris pv. campestris strain 8004 0.44 Xcc-8004.2345.1 Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE 0.45 Xcc-8004.3189.1 Cytochrome c-type biogenesis protein CcmE, heme chaperone
Agrobacterium fabrum C58 0.43 Atu2688 ABC transporter, membrane spanning protein (heme) 0.38 Atu0974 cytochrome-c biosynthesis heme-carrier protein cycJ
Sinorhizobium meliloti 1021 0.43 SMc03849 heme exporter C (cytochrome C-type biogenesis protein) transmembrane 0.39 SMc02362 cytochrome c-type biogenesis protein CcmE 0.30 33
Rhizobium sp. OAE497 0.42 ABIE40_RS18290 heme ABC transporter permease 0.35 ABIE40_RS05680 cytochrome c maturation protein CcmE 0.93 3
Rhodanobacter denitrificans FW104-10B01 0.42 LRK54_RS16080 heme ABC transporter permease 0.39 LRK54_RS16070 cytochrome c maturation protein CcmE
Rhodanobacter denitrificans MT42 0.42 LRK55_RS15830 heme ABC transporter permease 0.39 LRK55_RS15820 cytochrome c maturation protein CcmE
Rhodanobacter sp. FW510-T8 0.41 OKGIIK_08570 ccmC heme ABC transporter permease 0.41 OKGIIK_08580 ccmE cytochrome c maturation protein CcmE
Rhodospirillum rubrum S1H 0.41 Rru_A0038 Cytochrome c-type biogenesis protein CcmC (NCBI) 0.44 Rru_A0036 CcmE/CycJ protein (NCBI)
Lysobacter sp. OAE881 0.41 ABIE51_RS08715 heme ABC transporter permease CcmC 0.48 ABIE51_RS08705 cytochrome c maturation protein CcmE 0.97 2
Caulobacter crescentus NA1000 0.40 CCNA_03786 heme chaperone heme-lyase 0.43 CCNA_02849 cytochrome c-type biogenesis heme chaperone 0.91 1
Caulobacter crescentus NA1000 Δfur 0.40 CCNA_03786 heme chaperone heme-lyase 0.43 CCNA_02849 cytochrome c-type biogenesis heme chaperone low > 67
Rhodopseudomonas palustris CGA009 0.38 TX73_001060 heme ABC transporter permease 0.43 TX73_009895 cytochrome c maturation protein CcmE
Sphingomonas koreensis DSMZ 15582 0.37 Ga0059261_0175 heme exporter protein CcmC 0.46 Ga0059261_0173 Cytochrome c-type biogenesis protein CcmE
Dinoroseobacter shibae DFL-12 0.36 Dshi_1853 heme exporter protein CcmC (RefSeq) 0.36 Dshi_1758 CcmE/CycJ protein (RefSeq)
Phaeobacter inhibens DSM 17395 0.35 PGA1_c18870 heme exporter protein C 0.35 PGA1_c17040 cytochrome c-type biogenesis protein CcmE
Brevundimonas sp. GW460-12-10-14-LB2 0.35 A4249_RS12785 heme ABC transporter permease 0.45 A4249_RS10830 cytochrome c maturation protein CcmE

Not shown: 1 genomes with orthologs for PFLU_RS08655 only; 0 genomes with orthologs for PFLU_RS08665 only