Conservation of cofitness between OKFHMN_10730 and OKFHMN_21225 in Escherichia coli ECRC100

65 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC100 1.0 OKFHMN_10730 leuD 3-isopropylmalate dehydratase small subunit 1.0 OKFHMN_21225 pheA bifunctional chorismate mutase/prephenate dehydratase 0.94 17
Escherichia coli ECRC102 1.00 NIAGMN_08580 leuD 3-isopropylmalate dehydratase small subunit 1.00 NIAGMN_18995 pheA bifunctional chorismate mutase/prephenate dehydratase
Escherichia coli ECRC101 1.00 MCAODC_01245 leuD 3-isopropylmalate dehydratase small subunit 1.00 MCAODC_11755 pheA bifunctional chorismate mutase/prephenate dehydratase 0.97 7
Escherichia coli ECRC98 1.00 JDDGAC_14325 leuD 3-isopropylmalate dehydratase small subunit 1.00 JDDGAC_24890 pheA bifunctional chorismate mutase/prephenate dehydratase 0.97 4
Escherichia coli ECRC99 1.00 KEDOAH_17425 leuD 3-isopropylmalate dehydratase small subunit 1.00 KEDOAH_06995 pheA bifunctional chorismate mutase/prephenate dehydratase
Escherichia coli ECRC62 0.99 BNILDI_08535 leuD 3-isopropylmalate dehydratase small subunit 1.00 BNILDI_11705 pheA bifunctional chorismate mutase/prephenate dehydratase 0.94 29
Escherichia coli ECOR27 0.99 NOLOHH_03075 leuD 3-isopropylmalate dehydratase small subunit 1.00 NOLOHH_12900 pheA bifunctional chorismate mutase/prephenate dehydratase 0.86 46
Escherichia coli BW25113 0.99 b0071 leuD isopropylmalate isomerase small subunit (NCBI) 1.00 b2599 pheA fused chorismate mutase P/prephenate dehydratase (NCBI) 0.94 14
Escherichia coli BL21 0.99 ECD_00073 3-isopropylmalate dehydratase small subunit 1.00 ECD_02488 chorismate mutase and prephenate dehydratase, P-protein 0.85 26
Escherichia coli ECOR38 0.99 HEPCGN_08710 leuD 3-isopropylmalate dehydratase small subunit 1.00 HEPCGN_20345 pheA bifunctional chorismate mutase/prephenate dehydratase 0.86 53
Escherichia fergusonii Becca 0.99 EFB2_03974 3-isopropylmalate dehydratase small subunit 0.99 EFB2_01293 Bifunctional chorismate mutase/prephenate dehydratase low > 86
Escherichia coli Nissle 1917 0.99 ECOLIN_RS00385 3-isopropylmalate dehydratase small subunit 1.00 ECOLIN_RS14695 bifunctional chorismate mutase/prephenate dehydratase 0.81 21
Escherichia coli HS(pFamp)R (ATCC 700891) 0.98 OHPLBJKB_03586 3-isopropylmalate dehydratase small subunit 1.00 OHPLBJKB_01109 P-protein low > 73
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.92 GFF167 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) 0.88 GFF4179 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) low > 78
Enterobacter asburiae PDN3 0.89 EX28DRAFT_3667 3-isopropylmalate dehydratase, small subunit 0.92 EX28DRAFT_2699 chorismate mutase (EC 5.4.99.5) 0.83 9
Enterobacter sp. TBS_079 0.89 MPMX20_00766 3-isopropylmalate dehydratase small subunit 1 0.92 MPMX20_03466 Bifunctional chorismate mutase/prephenate dehydratase 0.91 21
Klebsiella michiganensis M5al 0.87 BWI76_RS04665 3-isopropylmalate dehydratase small subunit 0.89 BWI76_RS21465 bifunctional chorismate mutase/prephenate dehydratase 0.88 35
Dickeya dadantii 3937 0.83 DDA3937_RS18130 3-isopropylmalate dehydratase small subunit 0.75 DDA3937_RS16130 bifunctional chorismate mutase/prephenate dehydratase 0.69 37
Rahnella sp. WP5 0.83 EX31_RS03695 3-isopropylmalate dehydratase small subunit 0.73 EX31_RS07585 bifunctional chorismate mutase/prephenate dehydratase 0.96 17
Dickeya dianthicola ME23 0.82 DZA65_RS19215 3-isopropylmalate dehydratase small subunit 0.74 DZA65_RS17345 bifunctional chorismate mutase/prephenate dehydratase 0.64 64
Dickeya dianthicola 67-19 0.82 HGI48_RS18070 3-isopropylmalate dehydratase small subunit 0.75 HGI48_RS16250 bifunctional chorismate mutase/prephenate dehydratase 0.76 21
Pectobacterium carotovorum WPP14 0.80 HER17_RS03070 3-isopropylmalate dehydratase small subunit 0.77 HER17_RS05385 bifunctional chorismate mutase/prephenate dehydratase 0.97 8
Serratia liquefaciens MT49 0.80 IAI46_03340 3-isopropylmalate dehydratase small subunit 0.76 IAI46_03965 bifunctional chorismate mutase/prephenate dehydratase 0.44 15
Pantoea sp. MT58 0.79 IAI47_16015 3-isopropylmalate dehydratase small subunit 0.78 IAI47_04410 bifunctional chorismate mutase/prephenate dehydratase 0.95 19
Erwinia tracheiphila SCR3 0.72 LU632_RS02865 leuD 3-isopropylmalate dehydratase small subunit 0.74 LU632_RS16960 pheA bifunctional chorismate mutase/prephenate dehydratase 0.60 61
Vibrio cholerae E7946 ATCC 55056 0.72 CSW01_12610 3-isopropylmalate dehydratase small subunit 0.53 CSW01_03680 bifunctional chorismate mutase/prephenate dehydratase low > 62
Pseudomonas fluorescens FW300-N2E3 0.64 AO353_20625 3-isopropylmalate dehydratase 0.21 AO353_02070 prephenate dehydratase 0.78 36
Pseudomonas fluorescens GW456-L13 0.64 PfGW456L13_3947 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) 0.21 PfGW456L13_2176 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) 0.79 50
Pseudomonas sp. RS175 0.63 PFR28_02823 3-isopropylmalate dehydratase small subunit 1 0.22 PFR28_00907 Bifunctional chorismate mutase/prephenate dehydratase
Pseudomonas fluorescens FW300-N2E2 0.63 Pf6N2E2_64 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) 0.22 Pf6N2E2_2520 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51)
Pseudomonas fluorescens SBW25 0.63 PFLU_RS20575 3-isopropylmalate dehydratase small subunit 0.21 PFLU_RS08095 prephenate dehydratase
Pseudomonas putida KT2440 0.63 PP_1986 3-isopropylmalate dehydratase small subunit 0.21 PP_1769 chorismate mutase/Prephenate dehydratase
Pseudomonas fluorescens FW300-N1B4 0.63 Pf1N1B4_14 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) 0.22 Pf1N1B4_350 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51)
Pseudomonas fluorescens SBW25-INTG 0.63 PFLU_RS20575 3-isopropylmalate dehydratase small subunit 0.21 PFLU_RS08095 prephenate dehydratase
Pseudomonas fluorescens FW300-N2C3 0.62 AO356_21405 3-isopropylmalate dehydratase 0.22 AO356_03465 prephenate dehydratase
Pseudomonas simiae WCS417 0.62 PS417_18595 3-isopropylmalate dehydratase 0.21 PS417_08125 prephenate dehydratase low > 88
Pseudomonas sp. S08-1 0.62 OH686_04475 3-isopropylmalate dehydratase small subunit 0.22 OH686_20870 Chorismate mutase I / Prephenate dehydratase 0.61 45
Pseudomonas stutzeri RCH2 0.61 Psest_2590 3-isopropylmalate dehydratase, small subunit 0.22 Psest_1984 chorismate mutase domain of proteobacterial P-protein, clade 2
Pseudomonas syringae pv. syringae B728a 0.60 Psyr_1984 3-isopropylmalate dehydratase, small subunit 0.21 Psyr_3645 prephenate dehydratase
Pseudomonas syringae pv. syringae B728a ΔmexB 0.60 Psyr_1984 3-isopropylmalate dehydratase, small subunit 0.21 Psyr_3645 prephenate dehydratase
Xanthomonas campestris pv. campestris strain 8004 0.60 Xcc-8004.1050.1 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) 0.21 Xcc-8004.3282.1 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) 0.79 23
Alteromonas macleodii MIT1002 0.59 MIT1002_00946 3-isopropylmalate dehydratase small subunit 1 0.52 MIT1002_01316 P-protein 0.96 20
Ralstonia solanacearum PSI07 0.58 RPSI07_RS14700 3-isopropylmalate dehydratase small subunit 0.22 RPSI07_RS19710 prephenate dehydratase
Herbaspirillum seropedicae SmR1 0.58 HSERO_RS16505 3-isopropylmalate dehydratase small subunit 0.21 HSERO_RS18430 chorismate mutase 0.94 5
Variovorax sp. SCN45 0.58 GFF3889 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) 0.19 GFF6182 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) low > 127
Paraburkholderia bryophila 376MFSha3.1 0.58 H281DRAFT_06073 3-isopropylmalate dehydratase, small subunit 0.23 H281DRAFT_03925 chorismate mutase 0.64 9
Burkholderia phytofirmans PsJN 0.58 BPHYT_RS33905 3-isopropylmalate dehydratase small subunit 0.23 BPHYT_RS14910 chorismate mutase 0.71 18
Hydrogenophaga sp. GW460-11-11-14-LB1 0.58 GFF3361 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) 0.19 GFF5343 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) 0.90 7
Ralstonia solanacearum GMI1000 0.57 RS_RS09995 3-isopropylmalate dehydratase small subunit 0.21 RS_RS04495 prephenate dehydratase
Paraburkholderia sabiae LMG 24235 0.57 QEN71_RS17615 3-isopropylmalate dehydratase small subunit 0.23 QEN71_RS04070 prephenate dehydratase 0.82 15
Ralstonia sp. UNC404CL21Col 0.57 ABZR87_RS14535 3-isopropylmalate dehydratase small subunit 0.22 ABZR87_RS09450 prephenate dehydratase 0.84 17
Paraburkholderia graminis OAS925 0.57 ABIE53_004803 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit 0.23 ABIE53_003157 chorismate mutase/prephenate dehydratase 0.95 5
Cupriavidus basilensis FW507-4G11 0.57 RR42_RS14390 3-isopropylmalate dehydratase 0.22 RR42_RS04460 chorismate mutase 0.79 18
Ralstonia solanacearum UW163 0.57 UW163_RS11110 3-isopropylmalate dehydratase small subunit 0.21 UW163_RS16050 chorismate mutase
Ralstonia solanacearum IBSBF1503 0.57 RALBFv3_RS02615 3-isopropylmalate dehydratase small subunit 0.21 RALBFv3_RS13760 chorismate mutase 0.46 33
Kangiella aquimarina DSM 16071 0.57 B158DRAFT_1320 3-isopropylmalate dehydratase, small subunit 0.35 B158DRAFT_1385 Prephenate dehydratase low > 40
Variovorax sp. OAS795 0.56 ABID97_RS08460 3-isopropylmalate dehydratase small subunit 0.20 ABID97_RS09515 prephenate dehydratase
Acidovorax sp. GW101-3H11 0.56 Ac3H11_1527 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) 0.20 Ac3H11_2574 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) 0.94 6
Dechlorosoma suillum PS 0.55 Dsui_3199 3-isopropylmalate dehydratase, small subunit 0.19 Dsui_1940 chorismate mutase, clade 2
Acinetobacter radioresistens SK82 0.55 MPMX26_00346 3-isopropylmalate dehydratase small subunit 1 0.22 MPMX26_02021 Bifunctional chorismate mutase/prephenate dehydratase low > 36
Marinobacter adhaerens HP15 0.54 HP15_1833 isopropylmalate isomerase small subunit 0.22 HP15_1362 chorismate mutase / prephenate dehydratase
Castellaniella sp019104865 MT123 0.53 ABCV34_RS04285 3-isopropylmalate dehydratase small subunit 0.21 ABCV34_RS07110 prephenate dehydratase low > 48
Rhodanobacter denitrificans MT42 0.45 LRK55_RS07100 3-isopropylmalate dehydratase small subunit 0.21 LRK55_RS00135 prephenate dehydratase low > 63
Rhodanobacter denitrificans FW104-10B01 0.45 LRK54_RS07370 3-isopropylmalate dehydratase small subunit 0.21 LRK54_RS00395 prephenate dehydratase low > 59
Dyella japonica UNC79MFTsu3.2 0.39 ABZR86_RS15955 3-isopropylmalate dehydratase small subunit 0.21 ABZR86_RS02225 prephenate dehydratase 0.92 20
Lysobacter sp. OAE881 0.39 ABIE51_RS17580 3-isopropylmalate dehydratase small subunit 0.22 ABIE51_RS12145 prephenate dehydratase 0.91 10

Not shown: 32 genomes with orthologs for OKFHMN_10730 only; 3 genomes with orthologs for OKFHMN_21225 only