Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Escherichia coli ECRC100 | 1.0 | OKFHMN_10730 | leuD | 3-isopropylmalate dehydratase small subunit | 1.0 | OKFHMN_21225 | pheA | bifunctional chorismate mutase/prephenate dehydratase | 0.94 | 17 |
Escherichia coli ECRC102 | 1.00 | NIAGMN_08580 | leuD | 3-isopropylmalate dehydratase small subunit | 1.00 | NIAGMN_18995 | pheA | bifunctional chorismate mutase/prephenate dehydratase | — | — |
Escherichia coli ECRC101 | 1.00 | MCAODC_01245 | leuD | 3-isopropylmalate dehydratase small subunit | 1.00 | MCAODC_11755 | pheA | bifunctional chorismate mutase/prephenate dehydratase | 0.97 | 7 |
Escherichia coli ECRC98 | 1.00 | JDDGAC_14325 | leuD | 3-isopropylmalate dehydratase small subunit | 1.00 | JDDGAC_24890 | pheA | bifunctional chorismate mutase/prephenate dehydratase | 0.97 | 4 |
Escherichia coli ECRC99 | 1.00 | KEDOAH_17425 | leuD | 3-isopropylmalate dehydratase small subunit | 1.00 | KEDOAH_06995 | pheA | bifunctional chorismate mutase/prephenate dehydratase | — | — |
Escherichia coli ECRC62 | 0.99 | BNILDI_08535 | leuD | 3-isopropylmalate dehydratase small subunit | 1.00 | BNILDI_11705 | pheA | bifunctional chorismate mutase/prephenate dehydratase | 0.94 | 29 |
Escherichia coli ECOR27 | 0.99 | NOLOHH_03075 | leuD | 3-isopropylmalate dehydratase small subunit | 1.00 | NOLOHH_12900 | pheA | bifunctional chorismate mutase/prephenate dehydratase | 0.86 | 46 |
Escherichia coli BW25113 | 0.99 | b0071 | leuD | isopropylmalate isomerase small subunit (NCBI) | 1.00 | b2599 | pheA | fused chorismate mutase P/prephenate dehydratase (NCBI) | 0.94 | 14 |
Escherichia coli BL21 | 0.99 | ECD_00073 | | 3-isopropylmalate dehydratase small subunit | 1.00 | ECD_02488 | | chorismate mutase and prephenate dehydratase, P-protein | 0.85 | 26 |
Escherichia coli ECOR38 | 0.99 | HEPCGN_08710 | leuD | 3-isopropylmalate dehydratase small subunit | 1.00 | HEPCGN_20345 | pheA | bifunctional chorismate mutase/prephenate dehydratase | 0.86 | 53 |
Escherichia fergusonii Becca | 0.99 | EFB2_03974 | | 3-isopropylmalate dehydratase small subunit | 0.99 | EFB2_01293 | | Bifunctional chorismate mutase/prephenate dehydratase | low | > 86 |
Escherichia coli Nissle 1917 | 0.99 | ECOLIN_RS00385 | | 3-isopropylmalate dehydratase small subunit | 1.00 | ECOLIN_RS14695 | | bifunctional chorismate mutase/prephenate dehydratase | 0.81 | 21 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.98 | OHPLBJKB_03586 | | 3-isopropylmalate dehydratase small subunit | 1.00 | OHPLBJKB_01109 | | P-protein | low | > 73 |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.92 | GFF167 | | 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) | 0.88 | GFF4179 | | Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) | low | > 78 |
Enterobacter asburiae PDN3 | 0.89 | EX28DRAFT_3667 | | 3-isopropylmalate dehydratase, small subunit | 0.92 | EX28DRAFT_2699 | | chorismate mutase (EC 5.4.99.5) | 0.83 | 9 |
Enterobacter sp. TBS_079 | 0.89 | MPMX20_00766 | | 3-isopropylmalate dehydratase small subunit 1 | 0.92 | MPMX20_03466 | | Bifunctional chorismate mutase/prephenate dehydratase | 0.91 | 21 |
Klebsiella michiganensis M5al | 0.87 | BWI76_RS04665 | | 3-isopropylmalate dehydratase small subunit | 0.89 | BWI76_RS21465 | | bifunctional chorismate mutase/prephenate dehydratase | 0.88 | 35 |
Dickeya dadantii 3937 | 0.83 | DDA3937_RS18130 | | 3-isopropylmalate dehydratase small subunit | 0.75 | DDA3937_RS16130 | | bifunctional chorismate mutase/prephenate dehydratase | 0.69 | 37 |
Rahnella sp. WP5 | 0.83 | EX31_RS03695 | | 3-isopropylmalate dehydratase small subunit | 0.73 | EX31_RS07585 | | bifunctional chorismate mutase/prephenate dehydratase | 0.96 | 17 |
Dickeya dianthicola ME23 | 0.82 | DZA65_RS19215 | | 3-isopropylmalate dehydratase small subunit | 0.74 | DZA65_RS17345 | | bifunctional chorismate mutase/prephenate dehydratase | 0.64 | 64 |
Dickeya dianthicola 67-19 | 0.82 | HGI48_RS18070 | | 3-isopropylmalate dehydratase small subunit | 0.75 | HGI48_RS16250 | | bifunctional chorismate mutase/prephenate dehydratase | 0.76 | 21 |
Pectobacterium carotovorum WPP14 | 0.80 | HER17_RS03070 | | 3-isopropylmalate dehydratase small subunit | 0.77 | HER17_RS05385 | | bifunctional chorismate mutase/prephenate dehydratase | 0.97 | 8 |
Serratia liquefaciens MT49 | 0.80 | IAI46_03340 | | 3-isopropylmalate dehydratase small subunit | 0.76 | IAI46_03965 | | bifunctional chorismate mutase/prephenate dehydratase | 0.44 | 15 |
Pantoea sp. MT58 | 0.79 | IAI47_16015 | | 3-isopropylmalate dehydratase small subunit | 0.78 | IAI47_04410 | | bifunctional chorismate mutase/prephenate dehydratase | 0.95 | 19 |
Erwinia tracheiphila SCR3 | 0.72 | LU632_RS02865 | leuD | 3-isopropylmalate dehydratase small subunit | 0.74 | LU632_RS16960 | pheA | bifunctional chorismate mutase/prephenate dehydratase | 0.60 | 61 |
Vibrio cholerae E7946 ATCC 55056 | 0.72 | CSW01_12610 | | 3-isopropylmalate dehydratase small subunit | 0.53 | CSW01_03680 | | bifunctional chorismate mutase/prephenate dehydratase | low | > 62 |
Pseudomonas fluorescens FW300-N2E3 | 0.64 | AO353_20625 | | 3-isopropylmalate dehydratase | 0.21 | AO353_02070 | | prephenate dehydratase | 0.78 | 36 |
Pseudomonas fluorescens GW456-L13 | 0.64 | PfGW456L13_3947 | | 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) | 0.21 | PfGW456L13_2176 | | Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) | 0.79 | 50 |
Pseudomonas sp. RS175 | 0.63 | PFR28_02823 | | 3-isopropylmalate dehydratase small subunit 1 | 0.22 | PFR28_00907 | | Bifunctional chorismate mutase/prephenate dehydratase | — | — |
Pseudomonas fluorescens FW300-N2E2 | 0.63 | Pf6N2E2_64 | | 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) | 0.22 | Pf6N2E2_2520 | | Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) | — | — |
Pseudomonas fluorescens SBW25 | 0.63 | PFLU_RS20575 | | 3-isopropylmalate dehydratase small subunit | 0.21 | PFLU_RS08095 | | prephenate dehydratase | — | — |
Pseudomonas putida KT2440 | 0.63 | PP_1986 | | 3-isopropylmalate dehydratase small subunit | 0.21 | PP_1769 | | chorismate mutase/Prephenate dehydratase | — | — |
Pseudomonas fluorescens FW300-N1B4 | 0.63 | Pf1N1B4_14 | | 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) | 0.22 | Pf1N1B4_350 | | Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) | — | — |
Pseudomonas fluorescens SBW25-INTG | 0.63 | PFLU_RS20575 | | 3-isopropylmalate dehydratase small subunit | 0.21 | PFLU_RS08095 | | prephenate dehydratase | — | — |
Pseudomonas fluorescens FW300-N2C3 | 0.62 | AO356_21405 | | 3-isopropylmalate dehydratase | 0.22 | AO356_03465 | | prephenate dehydratase | — | — |
Pseudomonas simiae WCS417 | 0.62 | PS417_18595 | | 3-isopropylmalate dehydratase | 0.21 | PS417_08125 | | prephenate dehydratase | low | > 88 |
Pseudomonas sp. S08-1 | 0.62 | OH686_04475 | | 3-isopropylmalate dehydratase small subunit | 0.22 | OH686_20870 | | Chorismate mutase I / Prephenate dehydratase | 0.61 | 45 |
Pseudomonas stutzeri RCH2 | 0.61 | Psest_2590 | | 3-isopropylmalate dehydratase, small subunit | 0.22 | Psest_1984 | | chorismate mutase domain of proteobacterial P-protein, clade 2 | — | — |
Pseudomonas syringae pv. syringae B728a | 0.60 | Psyr_1984 | | 3-isopropylmalate dehydratase, small subunit | 0.21 | Psyr_3645 | | prephenate dehydratase | — | — |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.60 | Psyr_1984 | | 3-isopropylmalate dehydratase, small subunit | 0.21 | Psyr_3645 | | prephenate dehydratase | — | — |
Xanthomonas campestris pv. campestris strain 8004 | 0.60 | Xcc-8004.1050.1 | | 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) | 0.21 | Xcc-8004.3282.1 | | Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) | 0.79 | 23 |
Alteromonas macleodii MIT1002 | 0.59 | MIT1002_00946 | | 3-isopropylmalate dehydratase small subunit 1 | 0.52 | MIT1002_01316 | | P-protein | 0.96 | 20 |
Ralstonia solanacearum PSI07 | 0.58 | RPSI07_RS14700 | | 3-isopropylmalate dehydratase small subunit | 0.22 | RPSI07_RS19710 | | prephenate dehydratase | — | — |
Herbaspirillum seropedicae SmR1 | 0.58 | HSERO_RS16505 | | 3-isopropylmalate dehydratase small subunit | 0.21 | HSERO_RS18430 | | chorismate mutase | 0.94 | 5 |
Variovorax sp. SCN45 | 0.58 | GFF3889 | | 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) | 0.19 | GFF6182 | | Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) | low | > 127 |
Paraburkholderia bryophila 376MFSha3.1 | 0.58 | H281DRAFT_06073 | | 3-isopropylmalate dehydratase, small subunit | 0.23 | H281DRAFT_03925 | | chorismate mutase | 0.64 | 9 |
Burkholderia phytofirmans PsJN | 0.58 | BPHYT_RS33905 | | 3-isopropylmalate dehydratase small subunit | 0.23 | BPHYT_RS14910 | | chorismate mutase | 0.71 | 18 |
Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.58 | GFF3361 | | 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) | 0.19 | GFF5343 | | Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) | 0.90 | 7 |
Ralstonia solanacearum GMI1000 | 0.57 | RS_RS09995 | | 3-isopropylmalate dehydratase small subunit | 0.21 | RS_RS04495 | | prephenate dehydratase | — | — |
Paraburkholderia sabiae LMG 24235 | 0.57 | QEN71_RS17615 | | 3-isopropylmalate dehydratase small subunit | 0.23 | QEN71_RS04070 | | prephenate dehydratase | 0.82 | 15 |
Ralstonia sp. UNC404CL21Col | 0.57 | ABZR87_RS14535 | | 3-isopropylmalate dehydratase small subunit | 0.22 | ABZR87_RS09450 | | prephenate dehydratase | 0.84 | 17 |
Paraburkholderia graminis OAS925 | 0.57 | ABIE53_004803 | | 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit | 0.23 | ABIE53_003157 | | chorismate mutase/prephenate dehydratase | 0.95 | 5 |
Cupriavidus basilensis FW507-4G11 | 0.57 | RR42_RS14390 | | 3-isopropylmalate dehydratase | 0.22 | RR42_RS04460 | | chorismate mutase | 0.79 | 18 |
Ralstonia solanacearum UW163 | 0.57 | UW163_RS11110 | | 3-isopropylmalate dehydratase small subunit | 0.21 | UW163_RS16050 | | chorismate mutase | — | — |
Ralstonia solanacearum IBSBF1503 | 0.57 | RALBFv3_RS02615 | | 3-isopropylmalate dehydratase small subunit | 0.21 | RALBFv3_RS13760 | | chorismate mutase | 0.46 | 33 |
Kangiella aquimarina DSM 16071 | 0.57 | B158DRAFT_1320 | | 3-isopropylmalate dehydratase, small subunit | 0.35 | B158DRAFT_1385 | | Prephenate dehydratase | low | > 40 |
Variovorax sp. OAS795 | 0.56 | ABID97_RS08460 | | 3-isopropylmalate dehydratase small subunit | 0.20 | ABID97_RS09515 | | prephenate dehydratase | — | — |
Acidovorax sp. GW101-3H11 | 0.56 | Ac3H11_1527 | | 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) | 0.20 | Ac3H11_2574 | | Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) | 0.94 | 6 |
Dechlorosoma suillum PS | 0.55 | Dsui_3199 | | 3-isopropylmalate dehydratase, small subunit | 0.19 | Dsui_1940 | | chorismate mutase, clade 2 | — | — |
Acinetobacter radioresistens SK82 | 0.55 | MPMX26_00346 | | 3-isopropylmalate dehydratase small subunit 1 | 0.22 | MPMX26_02021 | | Bifunctional chorismate mutase/prephenate dehydratase | low | > 36 |
Marinobacter adhaerens HP15 | 0.54 | HP15_1833 | | isopropylmalate isomerase small subunit | 0.22 | HP15_1362 | | chorismate mutase / prephenate dehydratase | — | — |
Castellaniella sp019104865 MT123 | 0.53 | ABCV34_RS04285 | | 3-isopropylmalate dehydratase small subunit | 0.21 | ABCV34_RS07110 | | prephenate dehydratase | low | > 48 |
Rhodanobacter denitrificans MT42 | 0.45 | LRK55_RS07100 | | 3-isopropylmalate dehydratase small subunit | 0.21 | LRK55_RS00135 | | prephenate dehydratase | low | > 63 |
Rhodanobacter denitrificans FW104-10B01 | 0.45 | LRK54_RS07370 | | 3-isopropylmalate dehydratase small subunit | 0.21 | LRK54_RS00395 | | prephenate dehydratase | low | > 59 |
Dyella japonica UNC79MFTsu3.2 | 0.39 | ABZR86_RS15955 | | 3-isopropylmalate dehydratase small subunit | 0.21 | ABZR86_RS02225 | | prephenate dehydratase | 0.92 | 20 |
Lysobacter sp. OAE881 | 0.39 | ABIE51_RS17580 | | 3-isopropylmalate dehydratase small subunit | 0.22 | ABIE51_RS12145 | | prephenate dehydratase | 0.91 | 10 |
Not shown: 32 genomes with orthologs for OKFHMN_10730 only; 3 genomes with orthologs for OKFHMN_21225 only