Conservation of cofitness between HSERO_RS01565 and HSERO_RS11085 in Herbaspirillum seropedicae SmR1

50 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS01565 hemolysin secretion protein D 1.0 HSERO_RS11085 L-aspartate oxidase 0.26 14
Dechlorosoma suillum PS 0.59 Dsui_2025 RND family efflux transporter, MFP subunit 0.66 Dsui_2452 L-aspartate oxidase
Paraburkholderia graminis OAS925 0.58 ABIE53_004107 multidrug efflux system membrane fusion protein 0.73 ABIE53_003292 L-aspartate oxidase low > 113
Burkholderia phytofirmans PsJN 0.57 BPHYT_RS22510 MexE family multidrug efflux RND transporter periplasmic adaptor subunit 0.72 BPHYT_RS15640 L-aspartate oxidase 0.20 26
Paraburkholderia bryophila 376MFSha3.1 0.57 H281DRAFT_03189 membrane fusion protein, multidrug efflux system 0.73 H281DRAFT_04069 L-aspartate oxidase low > 103
Ralstonia sp. UNC404CL21Col 0.56 ABZR87_RS19405 efflux RND transporter periplasmic adaptor subunit 0.74 ABZR87_RS00345 L-aspartate oxidase low > 80
Paraburkholderia sabiae LMG 24235 0.55 QEN71_RS20100 efflux RND transporter periplasmic adaptor subunit 0.73 QEN71_RS03070 L-aspartate oxidase low > 153
Ralstonia solanacearum PSI07 0.54 RPSI07_RS05170 efflux RND transporter periplasmic adaptor subunit 0.74 RPSI07_RS12660 L-aspartate oxidase low > 81
Azospirillum sp. SherDot2 0.52 MPMX19_02967 Efflux pump periplasmic linker BepF 0.27 MPMX19_05671 L-aspartate oxidase low > 112
Cupriavidus basilensis FW507-4G11 0.50 RR42_RS27680 MexE family multidrug efflux RND transporter periplasmic adaptor subunit 0.74 RR42_RS17010 L-aspartate oxidase low > 128
Variovorax sp. SCN45 0.46 GFF430 RND efflux system, membrane fusion protein 0.65 GFF2580 L-aspartate oxidase (EC 1.4.3.16) low > 127
Variovorax sp. OAS795 0.45 ABID97_RS17355 efflux RND transporter periplasmic adaptor subunit 0.66 ABID97_RS07440 L-aspartate oxidase low > 91
Acidovorax sp. GW101-3H11 0.44 Ac3H11_259 Probable Co/Zn/Cd efflux system membrane fusion protein 0.63 Ac3H11_3824 L-aspartate oxidase (EC 1.4.3.16) low > 79
Pseudomonas syringae pv. syringae B728a ΔmexB 0.43 Psyr_2967 Secretion protein HlyD 0.64 Psyr_3959 L-aspartate oxidase low > 86
Pseudomonas syringae pv. syringae B728a 0.43 Psyr_2967 Secretion protein HlyD 0.64 Psyr_3959 L-aspartate oxidase low > 86
Pseudomonas fluorescens FW300-N2E2 0.43 Pf6N2E2_947 Multidrug efflux membrane fusion protein MexE 0.62 Pf6N2E2_2758 L-aspartate oxidase (EC 1.4.3.16) low > 103
Pseudomonas sp. RS175 0.43 PFR28_02012 Multidrug resistance protein MdtA 0.63 PFR28_00689 L-aspartate oxidase low > 88
Pseudomonas fluorescens GW456-L13 0.42 PfGW456L13_3061 Multidrug efflux membrane fusion protein MexE 0.63 PfGW456L13_4517 L-aspartate oxidase (EC 1.4.3.16) low > 87
Rhodopseudomonas palustris CGA009 0.42 TX73_015640 efflux RND transporter periplasmic adaptor subunit 0.26 TX73_005420 L-aspartate oxidase
Pseudomonas fluorescens FW300-N1B4 0.42 Pf1N1B4_4865 Multidrug efflux membrane fusion protein MexE 0.62 Pf1N1B4_3322 L-aspartate oxidase (EC 1.4.3.16) low > 87
Pseudomonas fluorescens FW300-N2E3 0.41 AO353_23965 RND transporter MFP subunit 0.63 AO353_17620 L-aspartate oxidase low > 101
Pseudomonas putida KT2440 0.41 PP_3425 Efflux transporter RND family, MFP subunit 0.64 PP_1426 L-aspartate oxidase low > 96
Rhizobium sp. OAE497 0.41 ABIE40_RS14880 efflux RND transporter periplasmic adaptor subunit 0.24 ABIE40_RS23260 L-aspartate oxidase low > 107
Agrobacterium fabrum C58 0.40 Atu2482 HlyD family secretion protein 0.25 Atu4097 L-aspartate oxidase low > 89
Pseudomonas stutzeri RCH2 0.40 Psest_2145 RND family efflux transporter, MFP subunit 0.64 Psest_3101 L-aspartate oxidase low > 67
Pseudomonas fluorescens SBW25-INTG 0.40 PFLU_RS14265 efflux RND transporter periplasmic adaptor subunit 0.63 PFLU_RS07225 L-aspartate oxidase low > 109
Pseudomonas fluorescens SBW25 0.40 PFLU_RS14265 efflux RND transporter periplasmic adaptor subunit 0.63 PFLU_RS07225 L-aspartate oxidase low > 109
Pseudomonas fluorescens FW300-N2C3 0.39 AO356_27600 RND transporter MFP subunit 0.63 AO356_04580 L-aspartate oxidase low > 104
Pseudomonas simiae WCS417 0.39 PS417_13195 RND transporter MFP subunit 0.63 PS417_07115 L-aspartate oxidase low > 88
Pseudomonas sp. S08-1 0.38 OH686_01010 Multidrug efflux system, membrane fusion component 0.63 OH686_20040 L-aspartate oxidase low > 80
Sinorhizobium meliloti 1021 0.37 SMc01094 multidrug efflux system transmembrane protein 0.28 SMc02599 L-aspartate oxidase low > 103
Pantoea sp. MT58 0.37 IAI47_10305 efflux RND transporter periplasmic adaptor subunit 0.58 IAI47_04845 L-aspartate oxidase low > 76
Shewanella sp. ANA-3 0.37 Shewana3_1077 RND family efflux transporter MFP subunit (RefSeq) 0.61 Shewana3_3033 L-aspartate oxidase (RefSeq)
Enterobacter asburiae PDN3 0.37 EX28DRAFT_1473 RND family efflux transporter, MFP subunit 0.58 EX28DRAFT_0071 L-aspartate oxidase (EC 1.4.3.16) low > 76
Serratia liquefaciens MT49 0.36 IAI46_09930 efflux RND transporter periplasmic adaptor subunit 0.59 IAI46_19590 L-aspartate oxidase low > 86
Enterobacter sp. TBS_079 0.36 MPMX20_01154 Multidrug resistance protein MdtE 0.57 MPMX20_03445 L-aspartate oxidase low > 85
Rhodospirillum rubrum S1H 0.36 Rru_A0887 Secretion protein HlyD (NCBI) 0.26 Rru_A1433 L-aspartate oxidase (NCBI) low > 58
Klebsiella michiganensis M5al 0.36 BWI76_RS12950 acriflavin resistance protein AcrA 0.58 BWI76_RS21360 L-aspartate oxidase low > 92
Rahnella sp. WP5 0.36 EX31_RS01490 efflux RND transporter periplasmic adaptor subunit 0.58 EX31_RS21795 L-aspartate oxidase low > 89
Magnetospirillum magneticum AMB-1 0.35 AMB_RS09485 efflux RND transporter periplasmic adaptor subunit 0.58 AMB_RS19650 L-aspartate oxidase
Alteromonas macleodii MIT1002 0.34 MIT1002_02999 Efflux pump periplasmic linker BepF 0.58 MIT1002_02720 L-aspartate oxidase
Desulfovibrio vulgaris Hildenborough JW710 0.32 DVU3247 efflux transporter, RND family, MFP subunit (TIGR) 0.33 DVU1809 nadB L-aspartate oxidase (TIGR)
Azospirillum brasilense Sp245 0.31 AZOBR_RS16480 hemolysin secretion protein D 0.22 AZOBR_RS18685 L-aspartate oxidase low > 97
Brevundimonas sp. GW460-12-10-14-LB2 0.31 A4249_RS09930 efflux RND transporter periplasmic adaptor subunit 0.23 A4249_RS00630 L-aspartate oxidase low > 48
Desulfovibrio vulgaris Miyazaki F 0.30 DvMF_0035 efflux transporter, RND family, MFP subunit (RefSeq) 0.34 DvMF_0526 L-aspartate oxidase (RefSeq)
Sphingomonas koreensis DSMZ 15582 0.29 Ga0059261_1851 RND family efflux transporter, MFP subunit 0.54 Ga0059261_2248 L-aspartate oxidase (EC 1.4.3.16)
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.29 GFF4247 RND efflux system, membrane fusion protein CmeA 0.59 GFF2106 L-aspartate oxidase (EC 1.4.3.16) low > 78
Phocaeicola vulgatus CL09T03C04 0.23 HMPREF1058_RS02445 efflux RND transporter periplasmic adaptor subunit 0.41 HMPREF1058_RS11085 L-aspartate oxidase
Phocaeicola dorei CL03T12C01 0.22 ABI39_RS01695 efflux RND transporter periplasmic adaptor subunit 0.41 ABI39_RS05945 L-aspartate oxidase
Parabacteroides merdae CL09T00C40 0.21 HMPREF1078_RS07685 efflux RND transporter periplasmic adaptor subunit 0.41 HMPREF1078_RS06605 L-aspartate oxidase
Bacteroides thetaiotaomicron VPI-5482 0.21 BT0885 putative cation efflux pump (NCBI ptt file) 0.40 BT3184 L-aspartate oxidase (NCBI ptt file) low > 81

Not shown: 7 genomes with orthologs for HSERO_RS01565 only; 40 genomes with orthologs for HSERO_RS11085 only