Conservation of cofitness between HSERO_RS17670 and HSERO_RS02130 in Herbaspirillum seropedicae SmR1

65 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS17670 LysR family transcriptional regulator 1.0 HSERO_RS02130 thiazole synthase 0.34 2
Paraburkholderia graminis OAS925 0.87 ABIE53_005534 DNA-binding transcriptional LysR family regulator 0.34 ABIE53_003714 thiazole synthase
Paraburkholderia bryophila 376MFSha3.1 0.85 H281DRAFT_01284 transcriptional regulator, LysR family 0.34 H281DRAFT_05639 thiazole-phosphate synthase
Burkholderia phytofirmans PsJN 0.85 BPHYT_RS21645 LysR family transcriptional regulator 0.35 BPHYT_RS17775 thiazole synthase
Paraburkholderia sabiae LMG 24235 0.75 QEN71_RS23475 LysR family transcriptional regulator 0.34 QEN71_RS27930 thiazole synthase
Cupriavidus basilensis FW507-4G11 0.67 RR42_RS28515 LysR family transcriptional regulator 0.32 RR42_RS01305 thiazole synthase
Acidovorax sp. GW101-3H11 0.39 Ac3H11_2888 Transcriptional regulator, LysR family 0.32 Ac3H11_1059 Thiazole biosynthesis protein ThiG
Hydrogenophaga sp. GW460-11-11-14-LB1 0.38 GFF5537 Transcriptional regulator, LysR family 0.35 GFF246 Thiazole biosynthesis protein ThiG
Pseudomonas simiae WCS417 0.38 PS417_18795 LysR family transcriptional regulator 0.65 PS417_26775 thiazole synthase low > 88
Pseudomonas fluorescens SBW25-INTG 0.37 PFLU_RS20860 LysR family transcriptional regulator 0.65 PFLU_RS28420 thiazole synthase low > 109
Pseudomonas fluorescens SBW25 0.37 PFLU_RS20860 LysR family transcriptional regulator 0.65 PFLU_RS28420 thiazole synthase low > 109
Ralstonia solanacearum GMI1000 0.37 RS_RS03085 LysR family transcriptional regulator 0.34 RS_RS00535 thiazole synthase
Ralstonia solanacearum UW163 0.35 UW163_RS18270 LysR family transcriptional regulator 0.33 UW163_RS03655 thiazole synthase
Azospirillum brasilense Sp245 0.35 AZOBR_RS00870 LysR family transcriptional regulator 0.41 AZOBR_RS30960 thiazole synthase
Ralstonia solanacearum IBSBF1503 0.35 RALBFv3_RS16915 LysR family transcriptional regulator 0.33 RALBFv3_RS09925 thiazole synthase
Azospirillum sp. SherDot2 0.33 MPMX19_00088 HTH-type transcriptional regulator HdfR 0.46 MPMX19_00262 Thiazole synthase low > 112
Bosea sp. OAE506 0.33 ABIE41_RS23080 LysR substrate-binding domain-containing protein 0.32 ABIE41_RS20185 thiazole synthase
Pseudomonas stutzeri RCH2 0.33 Psest_1630 Transcriptional regulator 0.68 Psest_0267 Uncharacterized enzyme of thiazole biosynthesis low > 67
Pseudomonas putida KT2440 0.32 PP_1863 Transcriptional regulator, LysR family 0.65 PP_5104 thiazole synthase low > 96
Pseudomonas sp. S08-1 0.31 OH686_22455 Transcriptional regulator, LysR family 0.67 OH686_14285 Thiazole synthase low > 80
Pseudomonas fluorescens GW456-L13 0.31 PfGW456L13_2241 Transcriptional regulator, LysR family 0.66 PfGW456L13_1000 Thiazole biosynthesis protein ThiG low > 87
Marinobacter adhaerens HP15 0.31 HP15_2775 transcriptional regulator protein, LysR family 0.68 HP15_3274 thiazole synthase
Sinorhizobium meliloti 1021 0.31 SMc04163 transcriptional regulator 0.25 SM_b20617 thiazole synthase
Agrobacterium fabrum C58 0.30 Atu1765 transcriptional regulator, LysR family 0.30 Atu2566 thiamin biosynthesis ThiG low > 89
Pseudomonas fluorescens FW300-N2C3 0.30 AO356_03135 LysR family transcriptional regulator 0.67 AO356_13375 thiazole synthase low > 104
Pseudomonas fluorescens FW300-N2E2 0.30 Pf6N2E2_2456 Transcriptional regulator, LysR family 0.67 Pf6N2E2_4590 Thiazole biosynthesis protein ThiG low > 103
Pseudomonas fluorescens FW300-N1B4 0.30 Pf1N1B4_272 Transcriptional regulator, LysR family 0.66 Pf1N1B4_2331 Thiazole biosynthesis protein ThiG low > 87
Pseudomonas sp. RS175 0.30 PFR28_00975 HTH-type transcriptional regulator HdfR 0.67 PFR28_04252 Thiazole synthase low > 88
Pseudomonas fluorescens FW300-N2E3 0.29 AO353_19100 LysR family transcriptional regulator 0.66 AO353_08215 thiazole synthase low > 101
Rhodopseudomonas palustris CGA009 0.28 TX73_013870 LysR substrate-binding domain-containing protein 0.33 TX73_018530 thiazole synthase
Pseudomonas syringae pv. syringae B728a ΔmexB 0.28 Psyr_3624 transcriptional regulator, LysR family 0.65 Psyr_4740 thiazole-phosphate synthase low > 86
Pseudomonas syringae pv. syringae B728a 0.28 Psyr_3624 transcriptional regulator, LysR family 0.65 Psyr_4740 thiazole-phosphate synthase low > 86
Variovorax sp. SCN45 0.27 GFF5707 Transcriptional regulator, LysR family 0.33 GFF1188 Thiazole synthase (EC 2.8.1.10) low > 127
Caulobacter crescentus NA1000 Δfur 0.27 CCNA_03625 transcriptional regulator CztR 0.60 CCNA_01957 thiazole biosynthesis protein ThiG
Caulobacter crescentus NA1000 0.27 CCNA_03625 transcriptional regulator CztR 0.60 CCNA_01957 thiazole biosynthesis protein ThiG
Pantoea sp. MT58 0.27 IAI47_18925 LysR family transcriptional regulator 0.30 IAI47_20700 thiazole synthase low > 76
Phaeobacter inhibens DSM 17395 0.26 PGA1_c21890 transcriptional regulator, LysR family 0.31 PGA1_c09070 thiazole biosynthesis protein ThiG low > 62
Serratia liquefaciens MT49 0.26 IAI46_07280 LysR family transcriptional regulator 0.37 IAI46_01300 thiazole synthase low > 86
Dinoroseobacter shibae DFL-12 0.25 Dshi_2777 transcriptional regulator, LysR family (RefSeq) 0.28 Dshi_0912 thiazole biosynthesis family protein (RefSeq) low > 64
Ralstonia sp. UNC404CL21Col 0.25 ABZR87_RS17245 LysR substrate-binding domain-containing protein 0.34 ABZR87_RS04800 thiazole synthase
Dickeya dianthicola 67-19 0.25 HGI48_RS14315 transcriptional regulator LrhA 0.39 HGI48_RS01150 thiazole synthase low > 71
Shewanella sp. ANA-3 0.25 Shewana3_0014 transcriptional regulator (RefSeq) 0.37 Shewana3_1940 thiG thiazole synthase (RefSeq) low > 73
Erwinia tracheiphila SCR3 0.25 LU632_RS07960 lrhA transcriptional regulator LrhA 0.35 LU632_RS00950 thiazole synthase
Dickeya dianthicola ME23 0.25 DZA65_RS14990 transcriptional regulator LrhA 0.39 DZA65_RS01195 thiazole synthase low > 75
Alteromonas macleodii MIT1002 0.24 MIT1002_02974 HTH-type transcriptional regulator GltC 0.36 MIT1002_00093 Thiazole synthase low > 70
Dickeya dadantii 3937 0.23 DDA3937_RS14340 transcriptional regulator LrhA 0.39 DDA3937_RS01155 thiazole synthase low > 74
Enterobacter sp. TBS_079 0.23 MPMX20_03219 HTH-type transcriptional regulator HdfR 0.38 MPMX20_00213 Thiazole synthase low > 85
Dyella japonica UNC79MFTsu3.2 0.23 ABZR86_RS17870 LysR family transcriptional regulator 0.71 ABZR86_RS11645 thiazole synthase
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.23 GFF1893 LysR family transcriptional regulator lrhA 0.37 GFF4202 Thiazole biosynthesis protein ThiG low > 78
Enterobacter asburiae PDN3 0.23 EX28DRAFT_0320 Transcriptional regulator 0.38 EX28DRAFT_4532 Uncharacterized enzyme of thiazole biosynthesis low > 76
Klebsiella michiganensis M5al 0.23 BWI76_RS20200 transcriptional regulator LrhA 0.38 BWI76_RS01535 thiazole synthase low > 92
Escherichia coli ECRC99 0.22 KEDOAH_05365 lrhA transcriptional regulator LrhA 0.38 KEDOAH_14765 thiG thiazole synthase
Escherichia coli HS(pFamp)R (ATCC 700891) 0.22 OHPLBJKB_01416 HTH-type transcriptional regulator HdfR 0.38 OHPLBJKB_04060 Thiazole synthase low > 73
Escherichia fergusonii Becca 0.22 EFB2_01569 HTH-type transcriptional regulator HdfR 0.38 EFB2_04621 Thiazole synthase low > 86
Escherichia coli BL21 0.22 ECD_02214 transcriptional repressor of flagellar, motility and chemotaxis genes 0.38 ECD_03867 thiamine biosynthesis ThiGH complex subunit low > 61
Escherichia coli ECRC102 0.22 NIAGMN_20600 lrhA transcriptional regulator LrhA 0.38 NIAGMN_11145 thiG thiazole synthase
Escherichia coli ECRC98 0.22 JDDGAC_26795 lrhA transcriptional regulator LrhA 0.38 JDDGAC_17020 thiG thiazole synthase low > 86
Escherichia coli ECRC101 0.22 MCAODC_13870 lrhA transcriptional regulator LrhA 0.38 MCAODC_03895 thiG thiazole synthase low > 87
Escherichia coli BW25113 0.22 b2289 lrhA DNA-binding transcriptional repressor of flagellar, motility and chemotaxis genes (NCBI) 0.39 b3991 thiG thiamin biosynthesis, thiazole moiety (VIMSS) low > 76
Escherichia coli ECRC62 0.22 BNILDI_13370 lrhA transcriptional regulator LrhA 0.38 BNILDI_05985 thiG thiazole synthase low > 75
Escherichia coli ECRC100 0.22 OKFHMN_22830 lrhA transcriptional regulator LrhA 0.38 OKFHMN_13395 thiG thiazole synthase low > 80
Escherichia coli ECOR38 0.22 HEPCGN_22035 lrhA transcriptional regulator LrhA 0.39 HEPCGN_12030 thiG thiazole synthase low > 87
Escherichia coli ECOR27 0.22 NOLOHH_14450 lrhA transcriptional regulator LrhA 0.38 NOLOHH_05540 thiG thiazole synthase low > 75
Rahnella sp. WP5 0.22 EX31_RS19440 transcriptional regulator LrhA 0.38 EX31_RS16795 thiazole synthase low > 89
Escherichia coli Nissle 1917 0.21 ECOLIN_RS13290 transcriptional regulator LrhA 0.37 ECOLIN_RS23020 thiazole synthase low > 55
Variovorax sp. OAS795 0.21 ABID97_RS22410 LysR substrate-binding domain-containing protein 0.35 ABID97_RS15315 thiazole synthase low > 91

Not shown: 4 genomes with orthologs for HSERO_RS17670 only; 29 genomes with orthologs for HSERO_RS02130 only