Conservation of cofitness between HSERO_RS21710 and HSERO_RS01255 in Herbaspirillum seropedicae SmR1

49 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS21710 antibiotic resistance protein MarC 1.0 HSERO_RS01255 acyl-CoA dehydrogenase 0.40 15
Hydrogenophaga sp. GW460-11-11-14-LB1 0.39 GFF2690 Multiple antibiotic resistance protein marC 0.71 GFF412 Acyl-CoA dehydrogenase (EC 1.3.8.7) low > 90
Paraburkholderia sabiae LMG 24235 0.31 QEN71_RS08795 MarC family protein 0.75 QEN71_RS02060 acyl-CoA dehydrogenase C-terminal domain-containing protein low > 153
Paraburkholderia bryophila 376MFSha3.1 0.29 H281DRAFT_02837 multiple antibiotic resistance protein 0.75 H281DRAFT_04624 hypothetical protein low > 103
Paraburkholderia graminis OAS925 0.29 ABIE53_005956 multiple antibiotic resistance protein 0.74 ABIE53_000783 alkylation response protein AidB-like acyl-CoA dehydrogenase low > 113
Burkholderia phytofirmans PsJN 0.29 BPHYT_RS26390 antibiotic resistance protein 0.74 BPHYT_RS03220 Acyl-CoA dehydrogenase (EC 1.3.8.7) (from data) low > 109
Azospirillum brasilense Sp245 0.26 AZOBR_RS31980 membrane protein 0.54 AZOBR_RS20230 acyl-CoA dehydrogenase low > 97
Azospirillum sp. SherDot2 0.25 MPMX19_05781 hypothetical protein 0.54 MPMX19_04899 3-methylmercaptopropionyl-CoA dehydrogenase low > 112
Caulobacter crescentus NA1000 0.24 CCNA_01734 MarC family integral membrane protein 0.50 CCNA_00078 acyl-CoA dehydrogenase low > 66
Caulobacter crescentus NA1000 Δfur 0.24 CCNA_01734 MarC family integral membrane protein 0.50 CCNA_00078 acyl-CoA dehydrogenase low > 67
Rhodospirillum rubrum S1H 0.21 Rru_A0654 Multiple antibiotic resistance (MarC)-related proteins (NCBI) 0.51 Rru_A1308 Acyl-CoA dehydrogenase (NCBI) low > 58
Shewanella loihica PV-4 0.19 Shew_1911 hypothetical protein (RefSeq) 0.50 Shew_2164 acyl-CoA dehydrogenase domain-containing protein (RefSeq) — —
Shewanella amazonensis SB2B 0.18 Sama_1694 hypothetical protein (RefSeq) 0.36 Sama_1743 Acyl-CoA dehydrogenase (EC 1.3.8.-) (from data) low > 62
Sinorhizobium meliloti 1021 0.18 SMc01232 hypothetical protein 0.50 SMc02229 acyl-CoA dehydrogenase low > 103
Shewanella sp. ANA-3 0.18 Shewana3_1789 hypothetical protein (RefSeq) 0.51 Shewana3_2552 acyl-CoA dehydrogenase domain-containing protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.18 SO2137 conserved hypothetical protein TIGR00427 (NCBI ptt file) 0.51 SO2768 acyl-CoA dehydrogenase family protein (NCBI ptt file) low > 76
Rhizobium sp. OAE497 0.17 ABIE40_RS09370 MarC family protein 0.51 ABIE40_RS02580 acyl-CoA dehydrogenase C-terminal domain-containing protein low > 107
Lysobacter sp. OAE881 0.17 ABIE51_RS10495 MarC family NAAT transporter 0.49 ABIE51_RS15170 acyl-CoA dehydrogenase C-terminal domain-containing protein low > 62
Acidovorax sp. GW101-3H11 0.17 Ac3H11_2153 Multiple antibiotic resistance (MarC) -related proteins 0.71 Ac3H11_1912 Acyl-CoA dehydrogenase (EC 1.3.8.7) low > 79
Castellaniella sp019104865 MT123 0.17 ABCV34_RS00685 MarC family protein 0.56 ABCV34_RS08075 acyl-CoA dehydrogenase C-terminal domain-containing protein low > 48
Ralstonia solanacearum GMI1000 0.17 RS_RS14775 membrane protein 0.77 RS_RS02345 acyl-CoA dehydrogenase — —
Ralstonia solanacearum IBSBF1503 0.17 RALBFv3_RS06830 membrane protein 0.76 RALBFv3_RS11515 acyl-CoA dehydrogenase — —
Ralstonia solanacearum UW163 0.17 UW163_RS06785 membrane protein 0.76 UW163_RS02070 acyl-CoA dehydrogenase — —
Ralstonia sp. UNC404CL21Col 0.16 ABZR87_RS02485 MarC family protein 0.78 ABZR87_RS07475 acyl-CoA dehydrogenase C-terminal domain-containing protein low > 80
Bosea sp. OAE506 0.16 ABIE41_RS15150 MarC family protein 0.51 ABIE41_RS23320 acyl-CoA dehydrogenase C-terminal domain-containing protein — —
Phaeobacter inhibens DSM 17395 0.16 PGA1_c19770 membrane protein, MarC family 0.49 PGA1_c12080 putative acyl-CoA dehydrogenase low > 62
Variovorax sp. OAS795 0.16 ABID97_RS00755 MarC family protein 0.72 ABID97_RS05855 acyl-CoA dehydrogenase C-terminal domain-containing protein low > 91
Variovorax sp. SCN45 0.16 GFF3614 UPF0056 inner membrane protein YchE 0.72 GFF4610 Long chain acyl-CoA dehydrogenase [fadN-fadA-fadE operon] (EC 1.3.8.8) low > 127
Agrobacterium fabrum C58 0.16 Atu1508 hypothetical protein 0.49 Atu0501 acyl-CoA dehydrogenase low > 89
Pseudomonas sp. S08-1 0.15 OH686_23600 UPF0056 inner membrane protein MarC 0.55 OH686_10320 Long chain acyl-CoA dehydrogenase [fadN-fadA-fadE operon] low > 80
Alteromonas macleodii MIT1002 0.15 MIT1002_03685 putative antibiotic transporter 0.50 MIT1002_01752 Acyl-CoA dehydrogenase low > 70
Cupriavidus basilensis FW507-4G11 0.15 RR42_RS18900 membrane protein 0.79 RR42_RS02505 acyl-CoA dehydrogenase low > 128
Dinoroseobacter shibae DFL-12 0.15 Dshi_1348 multiple antibiotic resistance (MarC)-related protein (RefSeq) 0.48 Dshi_0839 acyl-CoA dehydrogenase domain protein (RefSeq) low > 64
Ralstonia solanacearum PSI07 0.15 RPSI07_RS10405 membrane protein 0.76 RPSI07_RS21695 acyl-CoA dehydrogenase — —
Pseudomonas sp. RS175 0.15 PFR28_05211 hypothetical protein 0.56 PFR28_04096 3-methylmercaptopropionyl-CoA dehydrogenase low > 88
Pseudomonas fluorescens FW300-N1B4 0.14 Pf1N1B4_1320 membrane protein, MarC family 0.57 Pf1N1B4_2493 Acyl-CoA dehydrogenase (EC 1.3.8.7) low > 87
Pseudomonas fluorescens GW456-L13 0.14 PfGW456L13_60 membrane protein, MarC family 0.57 PfGW456L13_1153 Acyl-CoA dehydrogenase (EC 1.3.8.7) low > 87
Pseudomonas fluorescens FW300-N2C3 0.14 AO356_08255 hypothetical protein 0.56 AO356_14165 Acyl-CoA dehydrogenase (EC 1.3.8.7) (from data) low > 104
Pseudomonas fluorescens FW300-N2E3 0.14 AO353_13635 hypothetical protein 0.56 AO353_07495 acyl-CoA dehydrogenase low > 101
Pseudomonas fluorescens FW300-N2E2 0.14 Pf6N2E2_3525 membrane protein, MarC family 0.56 Pf6N2E2_4766 Acyl-CoA dehydrogenase (EC 1.3.8.7) low > 103
Pseudomonas simiae WCS417 0.13 PS417_02925 membrane protein 0.56 PS417_25975 Acyl-CoA dehydrogenase (EC 1.3.8.7) (from data) low > 88
Pseudomonas syringae pv. syringae B728a 0.13 Psyr_4409 Multiple antibiotic resistance (MarC)-related protein 0.56 Psyr_4681 Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.13 Psyr_4409 Multiple antibiotic resistance (MarC)-related protein 0.56 Psyr_4681 Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region low > 86
Pseudomonas putida KT2440 0.13 PP_4825 Membrane protein, MarC family 0.57 PP_0368 putative Acyl-CoA dehydrogenase low > 96
Pseudomonas fluorescens SBW25-INTG 0.13 PFLU_RS03000 MarC family protein 0.57 PFLU_RS27620 acyl-CoA dehydrogenase low > 109
Pseudomonas fluorescens SBW25 0.13 PFLU_RS03000 MarC family protein 0.57 PFLU_RS27620 acyl-CoA dehydrogenase low > 109
Xanthomonas campestris pv. campestris strain 8004 0.13 Xcc-8004.2016.1 FIG01210190: hypothetical protein 0.52 Xcc-8004.2104.1 Acyl-CoA dehydrogenase (EC 1.3.8.7) — —
Dyella japonica UNC79MFTsu3.2 0.13 ABZR86_RS09810 YhgN family NAAT transporter 0.49 ABZR86_RS19440 acyl-CoA dehydrogenase C-terminal domain-containing protein low > 74
Brevundimonas sp. GW460-12-10-14-LB2 0.12 A4249_RS14670 MarC family protein 0.49 A4249_RS00375 acyl-CoA dehydrogenase C-terminal domain-containing protein — —
Marinobacter adhaerens HP15 0.12 HP15_3589 multiple antibiotic resistance (MarC)-related protein 0.57 HP15_2479 acyl-CoA dehydrogenase family protein low > 73

Not shown: 40 genomes with orthologs for HSERO_RS21710 only; 9 genomes with orthologs for HSERO_RS01255 only