Conservation of cofitness between HER17_RS10965 and HER17_RS20905 in Pectobacterium carotovorum WPP14

68 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS10965 acyl-CoA thioester hydrolase YciA 1.0 HER17_RS20905 YicC family protein 0.70 10
Dickeya dadantii 3937 0.89 DDA3937_RS10430 acyl-CoA thioester hydrolase YciA 0.89 DDA3937_RS20645 YicC family protein low > 74
Dickeya dianthicola ME23 0.89 DZA65_RS10910 acyl-CoA thioester hydrolase YciA 0.89 DZA65_RS00575 YicC family protein low > 75
Dickeya dianthicola 67-19 0.88 HGI48_RS10435 acyl-CoA thioester hydrolase YciA 0.88 HGI48_RS00540 YicC family protein 0.51 27
Rahnella sp. WP5 0.85 EX31_RS10010 acyl-CoA thioester hydrolase YciA 0.88 EX31_RS14510 YicC family protein low > 89
Serratia liquefaciens MT49 0.84 IAI46_14085 acyl-CoA thioester hydrolase YciA 0.91 IAI46_24855 YicC family protein low > 86
Enterobacter asburiae PDN3 0.80 EX28DRAFT_0923 Acyl-CoA hydrolase 0.84 EX28DRAFT_3894 TIGR00255 family protein low > 76
Pantoea sp. MT58 0.80 IAI47_09135 acyl-CoA thioester hydrolase YciA 0.87 IAI47_00580 YicC family protein low > 76
Enterobacter sp. TBS_079 0.80 MPMX20_02575 putative acyl-CoA thioester hydrolase 0.86 MPMX20_00091 hypothetical protein low > 85
Klebsiella michiganensis M5al 0.79 BWI76_RS11790 acyl-CoA thioesterase 0.89 BWI76_RS27395 hypothetical protein low > 92
Escherichia coli ECRC62 0.79 BNILDI_18515 yciA acyl-CoA thioester hydrolase YciA 0.85 BNILDI_04050 yicC UPF0701 protein YicC 0.72 45
Escherichia coli ECOR27 0.79 NOLOHH_20370 yciA acyl-CoA thioester hydrolase YciA 0.85 NOLOHH_07465 yicC UPF0701 protein YicC low > 75
Escherichia coli ECOR38 0.79 HEPCGN_25145 yciA acyl-CoA thioester hydrolase YciA 0.85 HEPCGN_14405 yicC UPF0701 protein YicC low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.79 OHPLBJKB_02430 putative acyl-CoA thioester hydrolase 0.85 OHPLBJKB_00058 hypothetical protein low > 73
Escherichia coli Nissle 1917 0.79 ECOLIN_RS07565 acyl-CoA thioester hydrolase YciA 0.84 ECOLIN_RS20760 YicC/YloC family endoribonuclease low > 55
Escherichia fergusonii Becca 0.79 EFB2_02672 putative acyl-CoA thioester hydrolase 0.84 EFB2_00169 hypothetical protein low > 86
Escherichia coli BL21 0.79 ECD_01227 acyl-CoA esterase 0.85 ECD_03501 UPF0701 family protein low > 61
Escherichia coli BW25113 0.79 b1253 yciA predicted hydrolase (NCBI) 0.85 b3644 yicC hypothetical protein (NCBI) low > 76
Escherichia coli ECRC99 0.79 KEDOAH_25675 yciA acyl-CoA thioester hydrolase YciA 0.85 KEDOAH_12560 yicC UPF0701 protein YicC — —
Escherichia coli ECRC102 0.79 NIAGMN_27555 yciA acyl-CoA thioester hydrolase YciA 0.85 NIAGMN_13345 yicC UPF0701 protein YicC — —
Escherichia coli ECRC100 0.79 OKFHMN_28680 yciA acyl-CoA thioester hydrolase YciA 0.85 OKFHMN_15585 yicC UPF0701 protein YicC low > 80
Escherichia coli ECRC98 0.79 JDDGAC_05895 yciA acyl-CoA thioester hydrolase YciA 0.84 JDDGAC_19210 yicC UPF0701 protein YicC low > 86
Escherichia coli ECRC101 0.79 MCAODC_21580 yciA acyl-CoA thioester hydrolase YciA 0.85 MCAODC_06095 yicC UPF0701 protein YicC low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.77 GFF2735 Acyl-CoA thioesterase YciA, involved in membrane biogenesis 0.85 GFF365 Protein YicC low > 78
Vibrio cholerae E7946 ATCC 55056 0.61 CSW01_08560 acyl-CoA thioester hydrolase YciA 0.71 CSW01_01110 YicC family protein low > 62
Dinoroseobacter shibae DFL-12 0.52 Dshi_2218 thioesterase superfamily protein (RefSeq) 0.28 Dshi_1528 domain of unknown function DUF1732 (RefSeq) low > 64
Azospirillum brasilense Sp245 0.47 AZOBR_RS22235 acyl-CoA thioester hydrolase 0.23 AZOBR_RS16330 hypothetical protein — —
Bosea sp. OAE506 0.47 ABIE41_RS12055 acyl-CoA thioesterase 0.24 ABIE41_RS17740 YicC/YloC family endoribonuclease low > 77
Brevundimonas sp. GW460-12-10-14-LB2 0.46 A4249_RS12320 acyl-CoA thioesterase 0.24 A4249_RS06780 YicC family protein low > 48
Rhodospirillum rubrum S1H 0.45 Rru_A2709 Thioesterase superfamily (NCBI) 0.25 Rru_A0428 hypothetical protein (NCBI) — —
Azospirillum sp. SherDot2 0.45 MPMX19_00971 putative acyl-CoA thioester hydrolase 0.23 MPMX19_00983 hypothetical protein — —
Pseudomonas syringae pv. syringae B728a 0.44 Psyr_5043 Thioesterase superfamily 0.45 Psyr_0212 Conserved hypothetical protein 255 low > 86
Hydrogenophaga sp. GW460-11-11-14-LB1 0.44 GFF516 Acyl-CoA hydrolase (EC 3.1.2.20) 0.27 GFF3251 Protein YicC — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.44 Psyr_5043 Thioesterase superfamily 0.45 Psyr_0212 Conserved hypothetical protein 255 low > 86
Caulobacter crescentus NA1000 0.44 CCNA_00190 acyl-CoA hydrolase 0.23 CCNA_01752 YicC-family protein low > 66
Caulobacter crescentus NA1000 Δfur 0.44 CCNA_00190 acyl-CoA hydrolase 0.23 CCNA_01752 YicC-family protein low > 67
Pseudomonas sp. RS175 0.44 PFR28_04491 putative acyl-CoA thioester hydrolase 0.45 PFR28_04421 hypothetical protein — —
Pseudomonas fluorescens FW300-N2E2 0.44 Pf6N2E2_4077 cytosolic long-chain acyl-CoA thioester hydrolase family protein 0.46 Pf6N2E2_4364 Protein YicC low > 103
Pseudomonas fluorescens FW300-N2C3 0.44 AO356_11055 long-chain acyl-CoA thioester hydrolase 0.45 AO356_12495 hypothetical protein low > 104
Pseudomonas fluorescens SBW25 0.43 PFLU_RS29780 acyl-CoA thioesterase 0.46 PFLU_RS29495 YicC family protein low > 109
Pseudomonas simiae WCS417 0.43 PS417_28095 long-chain acyl-CoA thioester hydrolase 0.46 PS417_27815 hypothetical protein — —
Pseudomonas fluorescens SBW25-INTG 0.43 PFLU_RS29780 acyl-CoA thioesterase 0.46 PFLU_RS29495 YicC family protein low > 109
Pseudomonas fluorescens GW456-L13 0.43 PfGW456L13_751 cytosolic long-chain acyl-CoA thioester hydrolase family protein 0.46 PfGW456L13_783 Protein YicC low > 87
Pseudomonas fluorescens FW300-N1B4 0.43 Pf1N1B4_2032 cytosolic long-chain acyl-CoA thioester hydrolase family protein 0.47 Pf1N1B4_2116 Protein YicC — —
Magnetospirillum magneticum AMB-1 0.43 AMB_RS16945 acyl-CoA thioesterase 0.27 AMB_RS03835 YicC family protein low > 64
Agrobacterium fabrum C58 0.43 Atu3861 acyl-CoA hydrolase 0.24 Atu1100 hypothetical protein low > 89
Pseudomonas putida KT2440 0.43 PP_5331 Long-chain acyl-CoA thioester hydrolase 0.46 PP_5295 conserved protein of unknown function low > 96
Marinobacter adhaerens HP15 0.43 HP15_3390 thioesterase superfamily protein 0.47 HP15_301 conserved hypothetical protein low > 73
Pseudomonas fluorescens FW300-N2E3 0.43 AO353_09915 long-chain acyl-CoA thioester hydrolase 0.46 AO353_09265 hypothetical protein low > 101
Pseudomonas stutzeri RCH2 0.43 Psest_0218 Acyl-CoA hydrolase 0.45 Psest_3814 TIGR00255 family protein — —
Dechlorosoma suillum PS 0.43 Dsui_0322 acyl-CoA hydrolase 0.38 Dsui_0497 TIGR00255 family protein low > 51
Acidovorax sp. GW101-3H11 0.43 Ac3H11_1945 Acyl-CoA hydrolase (EC 3.1.2.20) 0.25 Ac3H11_3667 Protein YicC — —
Pseudomonas sp. S08-1 0.43 OH686_13400 cytosolic long-chain acyl-CoA thioester hydrolase family protein 0.46 OH686_13565 UPF0701 protein YicC low > 80
Sinorhizobium meliloti 1021 0.42 SMc04228 hypothetical protein 0.26 SMc00576 hypothetical protein low > 103
Ralstonia solanacearum UW163 0.42 UW163_RS02050 acyl-CoA thioesterase 0.32 UW163_RS10390 YicC family protein — —
Cupriavidus basilensis FW507-4G11 0.42 RR42_RS02530 acyl-CoA hydrolase 0.35 RR42_RS04905 hypothetical protein — —
Ralstonia solanacearum IBSBF1503 0.42 RALBFv3_RS11535 acyl-CoA thioesterase 0.32 RALBFv3_RS03330 YicC family protein low > 76
Ralstonia solanacearum PSI07 0.42 RPSI07_RS21675 acyl-CoA thioesterase 0.33 RPSI07_RS13855 YicC family protein low > 81
Variovorax sp. OAS795 0.42 ABID97_RS05905 acyl-CoA thioesterase 0.26 ABID97_RS23655 YicC/YloC family endoribonuclease low > 91
Variovorax sp. SCN45 0.42 GFF4599 Acyl-CoA hydrolase (EC 3.1.2.20) 0.27 GFF2378 UPF0701 protein YicC — —
Ralstonia solanacearum GMI1000 0.41 RS_RS02365 acyl-CoA thioesterase 0.32 RS_RS10815 YicC family protein — —
Castellaniella sp019104865 MT123 0.41 ABCV34_RS09595 acyl-CoA thioesterase 0.24 ABCV34_RS03510 DUF1732 domain-containing protein low > 48
Paraburkholderia graminis OAS925 0.41 ABIE53_000793 acyl-CoA thioesterase YciA 0.31 ABIE53_003233 uncharacterized protein (TIGR00255 family) low > 113
Paraburkholderia bryophila 376MFSha3.1 0.41 H281DRAFT_04633 (3S)-malyl-CoA thioesterase 0.31 H281DRAFT_04007 TIGR00255 family protein low > 103
Ralstonia sp. UNC404CL21Col 0.41 ABZR87_RS07500 acyl-CoA thioesterase 0.32 ABZR87_RS15240 YicC/YloC family endoribonuclease low > 80
Rhizobium sp. OAE497 0.40 ABIE40_RS10785 acyl-CoA thioesterase 0.25 ABIE40_RS06380 YicC/YloC family endoribonuclease low > 107
Paraburkholderia sabiae LMG 24235 0.40 QEN71_RS02095 acyl-CoA thioesterase 0.31 QEN71_RS03650 YicC/YloC family endoribonuclease low > 153
Burkholderia phytofirmans PsJN 0.39 BPHYT_RS03270 acyl-CoA hydrolase 0.30 BPHYT_RS15320 hypothetical protein low > 109
Herbaspirillum seropedicae SmR1 0.38 HSERO_RS19275 acyl-CoA hydrolase 0.34 HSERO_RS10650 hypothetical protein low > 78

Not shown: 2 genomes with orthologs for HER17_RS10965 only; 28 genomes with orthologs for HER17_RS20905 only