Conservation of cofitness between HER17_RS20085 and HER17_RS08825 in Pectobacterium carotovorum WPP14

64 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS20085 nucleoside diphosphate kinase regulator 1.0 HER17_RS08825 glutathione peroxidase 0.73 1
Serratia liquefaciens MT49 0.84 IAI46_22555 nucleoside diphosphate kinase regulator 0.66 IAI46_11005 glutathione peroxidase low > 86
Dickeya dadantii 3937 0.83 DDA3937_RS01505 nucleoside diphosphate kinase regulator 0.70 DDA3937_RS12960 glutathione peroxidase low > 74
Dickeya dianthicola ME23 0.82 DZA65_RS01485 nucleoside diphosphate kinase regulator 0.70 DZA65_RS13495 glutathione peroxidase low > 75
Dickeya dianthicola 67-19 0.82 HGI48_RS01420 nucleoside diphosphate kinase regulator 0.70 HGI48_RS13030 glutathione peroxidase low > 71
Rahnella sp. WP5 0.73 EX31_RS12330 nucleoside diphosphate kinase regulator 0.62 EX31_RS14030 glutathione peroxidase low > 89
Klebsiella michiganensis M5al 0.68 BWI76_RS07955 nucleoside diphosphate kinase regulator 0.57 BWI76_RS17100 glutathione peroxidase low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.61 GFF4522 Regulator of nucleoside diphosphate kinase 0.60 GFF3530 Glutathione peroxidase family protein — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.60 OHPLBJKB_03095 Regulator of nucleoside diphosphate kinase 0.58 OHPLBJKB_02023 Thioredoxin/glutathione peroxidase BtuE low > 73
Escherichia coli ECRC99 0.60 KEDOAH_20485 rnk nucleoside diphosphate kinase regulator 0.58 KEDOAH_01005 btuE bifunctional thioredoxin/glutathione peroxidase — —
Escherichia coli ECOR27 0.60 NOLOHH_23860 rnk nucleoside diphosphate kinase regulator 0.58 NOLOHH_17625 btuE bifunctional thioredoxin/glutathione peroxidase low > 75
Escherichia coli ECRC101 0.60 MCAODC_26700 rnk nucleoside diphosphate kinase regulator 0.58 MCAODC_18305 btuE bifunctional thioredoxin/glutathione peroxidase — —
Escherichia coli ECRC102 0.60 NIAGMN_05540 rnk nucleoside diphosphate kinase regulator 0.58 NIAGMN_00960 btuE bifunctional thioredoxin/glutathione peroxidase — —
Escherichia coli ECOR38 0.60 HEPCGN_00790 rnk nucleoside diphosphate kinase regulator 0.57 HEPCGN_05470 btuE bifunctional thioredoxin/glutathione peroxidase — —
Escherichia fergusonii Becca 0.60 EFB2_03482 Regulator of nucleoside diphosphate kinase 0.59 EFB2_02281 Thioredoxin/glutathione peroxidase BtuE low > 86
Escherichia coli ECRC100 0.60 OKFHMN_07485 rnk nucleoside diphosphate kinase regulator 0.58 OKFHMN_27105 btuE bifunctional thioredoxin/glutathione peroxidase — —
Escherichia coli Nissle 1917 0.60 ECOLIN_RS03335 nucleoside diphosphate kinase regulator 0.58 ECOLIN_RS09555 bifunctional thioredoxin/glutathione peroxidase — —
Escherichia coli BL21 0.60 ECD_00578 regulator of nucleoside diphosphate kinase 0.58 ECD_01679 glutathione peroxidase — —
Escherichia coli ECRC98 0.60 JDDGAC_11130 rnk nucleoside diphosphate kinase regulator 0.58 JDDGAC_01680 btuE bifunctional thioredoxin/glutathione peroxidase low > 86
Escherichia coli BW25113 0.60 b0610 rnk nucleoside diphosphate kinase regulator (NCBI) 0.58 b1710 btuE predicted glutathione peroxidase (NCBI) low > 76
Enterobacter sp. TBS_079 0.60 MPMX20_01276 Regulator of nucleoside diphosphate kinase 0.56 MPMX20_01903 Thioredoxin/glutathione peroxidase BtuE low > 85
Enterobacter asburiae PDN3 0.58 EX28DRAFT_2346 Transcription elongation factor 0.59 EX28DRAFT_1717 Glutathione peroxidase — —
Rhodanobacter denitrificans FW104-10B01 0.48 LRK54_RS17435 nucleoside diphosphate kinase regulator 0.38 LRK54_RS14740 glutathione peroxidase low > 59
Rhodanobacter denitrificans MT42 0.48 LRK55_RS17655 nucleoside diphosphate kinase regulator 0.38 LRK55_RS14455 glutathione peroxidase low > 63
Lysobacter sp. OAE881 0.48 ABIE51_RS07025 nucleoside diphosphate kinase regulator 0.38 ABIE51_RS09170 glutathione peroxidase — —
Rhodanobacter sp. FW510-T8 0.46 OKGIIK_07510 rnk nucleoside diphosphate kinase regulator 0.38 OKGIIK_03565 btuE glutathione peroxidase low > 52
Shewanella oneidensis MR-1 0.43 SO1935 rnk regulator of nucleoside diphosphate kinase (NCBI ptt file) 0.41 SO1563 glutathione peroxidase, putative (NCBI ptt file) low > 76
Acidovorax sp. GW101-3H11 0.42 Ac3H11_3182 Regulator of nucleoside diphosphate kinase 0.55 Ac3H11_2738 Glutathione peroxidase family protein — —
Shewanella amazonensis SB2B 0.42 Sama_1433 GreA/GreB family elongation factor (RefSeq) 0.40 Sama_1080 glutathione peroxidase (RefSeq) low > 62
Shewanella sp. ANA-3 0.42 Shewana3_1714 GreA/GreB family elongation factor (RefSeq) 0.43 Shewana3_2875 glutathione peroxidase (RefSeq) low > 73
Xanthomonas campestris pv. campestris strain 8004 0.39 Xcc-8004.4225.1 Regulator of nucleoside diphosphate kinase 0.51 Xcc-8004.5371.1 Glutathione peroxidase family protein low > 74
Pseudomonas fluorescens FW300-N2C3 0.37 AO356_12755 nucleoside diphosphate kinase regulator 0.48 AO356_16695 glutathione peroxidase low > 104
Pseudomonas sp. RS175 0.37 PFR28_04372 Regulator of nucleoside diphosphate kinase 0.47 PFR28_00198 Thioredoxin/glutathione peroxidase BtuE low > 88
Pseudomonas sp. S08-1 0.37 OH686_13825 Regulator of nucleoside diphosphate kinase 0.46 OH686_06250 Glutathione peroxidase or Thioredoxin peroxidase low > 80
Pseudomonas putida KT2440 0.37 PP_5223 regulator of nucleotide diphosphokinase 0.48 PP_0777 Glutathione peroxidase low > 96
Pseudomonas syringae pv. syringae B728a ΔmexB 0.36 Psyr_0178 regulator of nucleoside diphosphate kinase 0.43 Psyr_1010 Glutathione peroxidase low > 86
Pseudomonas syringae pv. syringae B728a 0.36 Psyr_0178 regulator of nucleoside diphosphate kinase 0.43 Psyr_1010 Glutathione peroxidase low > 86
Pseudomonas stutzeri RCH2 0.36 Psest_3761 Transcription elongation factor 0.43 Psest_3211 Glutathione peroxidase — —
Pseudomonas fluorescens SBW25-INTG 0.35 PFLU_RS29245 nucleoside diphosphate kinase regulator 0.48 PFLU_RS25350 glutathione peroxidase low > 109
Pseudomonas fluorescens SBW25 0.35 PFLU_RS29245 nucleoside diphosphate kinase regulator 0.48 PFLU_RS25350 glutathione peroxidase low > 109
Pseudomonas fluorescens FW300-N1B4 0.35 Pf1N1B4_2178 Regulator of nucleoside diphosphate kinase 0.45 Pf1N1B4_1051 Glutathione peroxidase family protein low > 87
Variovorax sp. SCN45 0.35 GFF1183 Regulator of nucleoside diphosphate kinase 0.41 GFF5112 Glutathione peroxidase (EC 1.11.1.9) @ Thioredoxin peroxidase (EC 1.11.1.15) — —
Pseudomonas fluorescens GW456-L13 0.34 PfGW456L13_849 Regulator of nucleoside diphosphate kinase 0.51 PfGW456L13_3386 Glutathione peroxidase family protein low > 87
Acinetobacter radioresistens SK82 0.34 MPMX26_02046 Regulator of nucleoside diphosphate kinase 0.49 MPMX26_00109 Thioredoxin/glutathione peroxidase BtuE low > 36
Pseudomonas simiae WCS417 0.34 PS417_27565 nucleoside diphosphate kinase regulator 0.48 PS417_23535 glutathione peroxidase — —
Pseudomonas fluorescens FW300-N2E3 0.34 AO353_09025 nucleoside diphosphate kinase regulator 0.47 AO353_05050 glutathione peroxidase low > 101
Hydrogenophaga sp. GW460-11-11-14-LB1 0.34 GFF3632 Regulator of nucleoside diphosphate kinase 0.42 GFF1918 Glutathione peroxidase family protein low > 90
Pseudomonas fluorescens FW300-N2E2 0.33 Pf6N2E2_4424 Regulator of nucleoside diphosphate kinase 0.47 Pf6N2E2_5263 Glutathione peroxidase family protein low > 103
Cupriavidus basilensis FW507-4G11 0.32 RR42_RS19895 elongation factor GreAB 0.52 RR42_RS00280 glutathione peroxidase low > 128
Rhodospirillum rubrum S1H 0.32 Rru_A0942 GreA/GreB family elongation factor (NCBI) 0.41 Rru_A0020 Glutathione peroxidase (NCBI) — —
Variovorax sp. OAS795 0.32 ABID97_RS29100 GreA/GreB family elongation factor 0.41 ABID97_RS03670 glutathione peroxidase low > 91
Ralstonia sp. UNC404CL21Col 0.31 ABZR87_RS00985 nucleoside diphosphate kinase regulator 0.39 ABZR87_RS01180 glutathione peroxidase low > 80
Pontibacter actiniarum KMM 6156, DSM 19842 0.30 CA264_08435 transcription elongation factor GreAB 0.34 CA264_01615 glutathione peroxidase low > 74
Azospirillum sp. SherDot2 0.29 MPMX19_05503 Regulator of nucleoside diphosphate kinase 0.36 MPMX19_02462 Hydroperoxy fatty acid reductase gpx1 low > 112
Ralstonia solanacearum PSI07 0.29 RPSI07_RS11955 nucleoside diphosphate kinase regulator 0.40 RPSI07_RS11770 glutathione peroxidase low > 81
Ralstonia solanacearum IBSBF1503 0.29 RALBFv3_RS05345 elongation factor GreAB 0.39 RALBFv3_RS05530 glutathione peroxidase low > 76
Ralstonia solanacearum UW163 0.29 UW163_RS08280 elongation factor GreAB 0.39 UW163_RS08095 glutathione peroxidase — —
Paraburkholderia bryophila 376MFSha3.1 0.29 H281DRAFT_00397 GreA/GreB family elongation factor 0.39 H281DRAFT_00594 glutathione peroxidase low > 103
Rhodopseudomonas palustris CGA009 0.29 TX73_004465 nucleoside diphosphate kinase regulator 0.38 TX73_018800 glutathione peroxidase low > 86
Ralstonia solanacearum GMI1000 0.29 RS_RS13210 nucleoside diphosphate kinase regulator 0.39 RS_RS13390 glutathione peroxidase low > 80
Burkholderia phytofirmans PsJN 0.28 BPHYT_RS13215 elongation factor GreAB 0.39 BPHYT_RS12215 glutathione peroxidase — —
Dinoroseobacter shibae DFL-12 0.27 Dshi_0557 GreA/GreB family elongation factor (RefSeq) 0.22 Dshi_2055 glutathione peroxidase (RefSeq) low > 64
Dechlorosoma suillum PS 0.27 Dsui_0102 transcription elongation factor 0.39 Dsui_1119 glutathione peroxidase low > 51
Alteromonas macleodii MIT1002 0.22 MIT1002_03243 Regulator of nucleoside diphosphate kinase 0.39 MIT1002_01975 hypothetical protein low > 70
Sphingomonas koreensis DSMZ 15582 0.21 Ga0059261_3606 Transcription elongation factor 0.49 Ga0059261_2794 Glutathione peroxidase low > 68

Not shown: 4 genomes with orthologs for HER17_RS20085 only; 21 genomes with orthologs for HER17_RS08825 only