| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pectobacterium carotovorum WPP14 | 1.0 | HER17_RS07710 | | UvrY/SirA/GacA family response regulator transcription factor | 1.0 | HER17_RS08090 | | flagellar motor stator protein MotA | 0.74 | 7 |
| Dickeya dianthicola ME23 | 0.92 | DZA65_RS14290 | | UvrY/SirA/GacA family response regulator transcription factor | 0.88 | DZA65_RS14085 | | flagellar motor stator protein MotA | low | > 75 |
| Dickeya dianthicola 67-19 | 0.91 | HGI48_RS13800 | | UvrY/SirA/GacA family response regulator transcription factor | 0.88 | HGI48_RS13600 | | flagellar motor stator protein MotA | low | > 71 |
| Dickeya dadantii 3937 | 0.91 | DDA3937_RS13705 | | UvrY/SirA/GacA family response regulator transcription factor | 0.89 | DDA3937_RS13555 | | flagellar motor stator protein MotA | low | > 74 |
| Serratia liquefaciens MT49 | 0.88 | IAI46_09205 | | UvrY/SirA/GacA family response regulator transcription factor | 0.84 | IAI46_16050 | | flagellar motor stator protein MotA | low | > 86 |
| Rahnella sp. WP5 | 0.87 | EX31_RS24145 | | UvrY/SirA/GacA family response regulator transcription factor | 0.82 | EX31_RS11415 | | flagellar motor stator protein MotA | low | > 89 |
| Pantoea sp. MT58 | 0.86 | IAI47_12470 | | UvrY/SirA/GacA family response regulator transcription factor | 0.80 | IAI47_08290 | | flagellar motor stator protein MotA | low | > 76 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.84 | GFF1699 | | BarA-associated response regulator UvrY (= GacA = SirA) | 0.77 | GFF1671 | | Flagellar motor rotation protein MotA | low | > 78 |
| Escherichia coli BW25113 | 0.84 | b1914 | uvrY | response regulator (NCBI) | 0.77 | b1890 | motA | flagellar motor protein MotA (NCBI) | low | > 76 |
| Escherichia coli Nissle 1917 | 0.84 | ECOLIN_RS10900 | | UvrY/SirA/GacA family response regulator transcription factor | 0.77 | ECOLIN_RS10790 | | flagellar motor stator protein MotA | — | — |
| Escherichia fergusonii Becca | 0.84 | EFB2_02032 | | Response regulator UvrY | 0.78 | EFB2_02053 | | Motility protein A | low | > 86 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.84 | OHPLBJKB_01815 | | Response regulator UvrY | 0.77 | OHPLBJKB_01838 | | Motility protein A | low | > 73 |
| Escherichia coli ECRC100 | 0.84 | OKFHMN_25820 | uvrC | excinuclease ABC subunit UvrC | 0.77 | OKFHMN_26110 | motA | flagellar motor stator protein MotA | low | > 80 |
| Escherichia coli ECRC62 | 0.84 | BNILDI_15230 | uvrY | UvrY/SirA/GacA family response regulator transcription factor | 0.77 | BNILDI_15340 | motA | flagellar motor stator protein MotA | low | > 75 |
| Escherichia coli ECOR38 | 0.84 | HEPCGN_04175 | uvrC | excinuclease ABC subunit UvrC | 0.77 | HEPCGN_04530 | motA | flagellar motor stator protein MotA | low | > 87 |
| Escherichia coli ECRC98 | 0.84 | JDDGAC_00410 | uvrC | excinuclease ABC subunit UvrC | 0.77 | JDDGAC_00685 | motA | flagellar motor stator protein MotA | low | > 86 |
| Escherichia coli ECRC99 | 0.84 | KEDOAH_02270 | uvrC | excinuclease ABC subunit UvrC | 0.77 | KEDOAH_01995 | motA | flagellar motor stator protein MotA | — | — |
| Escherichia coli ECOR27 | 0.84 | NOLOHH_16440 | uvrY | UvrY/SirA/GacA family response regulator transcription factor | 0.77 | NOLOHH_16550 | motA | flagellar motor stator protein MotA | low | > 75 |
| Escherichia coli ECRC102 | 0.84 | NIAGMN_02230 | uvrC | excinuclease ABC subunit UvrC | 0.77 | NIAGMN_01950 | motA | flagellar motor stator protein MotA | — | — |
| Escherichia coli ECRC101 | 0.84 | MCAODC_19570 | uvrC | excinuclease ABC subunit UvrC | 0.77 | MCAODC_19295 | motA | flagellar motor stator protein MotA | low | > 87 |
| Enterobacter sp. TBS_079 | 0.83 | MPMX20_02839 | | Response regulator UvrY | 0.78 | MPMX20_02800 | | Motility protein A | low | > 85 |
| Enterobacter asburiae PDN3 | 0.83 | EX28DRAFT_0633 | | two component transcriptional regulator, LuxR family | 0.78 | EX28DRAFT_0660 | | flagellar motor stator protein MotA | low | > 76 |
| Erwinia tracheiphila SCR3 | 0.83 | LU632_RS10190 | uvrY | UvrY/SirA/GacA family response regulator transcription factor | 0.81 | LU632_RS13570 | motA | flagellar motor stator protein MotA | — | — |
| Shewanella oneidensis MR-1 | 0.67 | SO1860 | | DNA-binding response regulator, LuxR family (NCBI ptt file) | 0.10 | SO4287 | motA | chemotaxis motA protein (NCBI ptt file) | low | > 76 |
| Pseudomonas stutzeri RCH2 | 0.57 | Psest_2260 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | 0.42 | Psest_0496 | | flagellar motor stator protein MotA | low | > 67 |
| Pseudomonas sp. RS175 | 0.56 | PFR28_01410 | | Response regulator GacA | 0.41 | PFR28_05110 | | Motility protein A | low | > 88 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.56 | Psyr_2897 | | regulatory protein, LuxR:Response regulator receiver | 0.41 | Psyr_0561 | | chemotaxis motA protein | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.56 | Psyr_2897 | | regulatory protein, LuxR:Response regulator receiver | 0.41 | Psyr_0561 | | chemotaxis motA protein | low | > 86 |
| Pseudomonas putida KT2440 | 0.55 | PP_4099 | | two-componenent system BarA/UvrY - regulatory subunit | 0.42 | PP_4905 | | Flagellar motor rotation protein | low | > 96 |
| Pseudomonas fluorescens SBW25 | 0.55 | PFLU_RS10765 | | UvrY/SirA/GacA family response regulator transcription factor | 0.41 | PFLU_RS02510 | | flagellar motor stator protein MotA | 0.73 | 75 |
| Pseudomonas simiae WCS417 | 0.55 | PS417_10720 | | chemotaxis protein CheY | 0.41 | PS417_02435 | | flagellar motor protein MotA | low | > 88 |
| Pseudomonas fluorescens SBW25-INTG | 0.55 | PFLU_RS10765 | | UvrY/SirA/GacA family response regulator transcription factor | 0.41 | PFLU_RS02510 | | flagellar motor stator protein MotA | low | > 109 |
| Pseudomonas sp. S08-1 | 0.53 | OH686_00335 | | BarA-associated response regulator UvrY ( GacA SirA) | 0.42 | OH686_09525 | | flagellar motor stator protein MotA | low | > 80 |
| Pseudomonas fluorescens FW300-N2E3 | 0.51 | AO353_21830 | | chemotaxis protein CheY | 0.41 | AO353_13090 | | flagellar motor stator protein MotA | low | > 101 |
| Pseudomonas fluorescens FW300-N2E2 | 0.50 | Pf6N2E2_2022 | | BarA-associated response regulator UvrY (= GacA = SirA) | 0.41 | Pf6N2E2_3625 | | Flagellar motor rotation protein MotA | 0.51 | 17 |
| Marinobacter adhaerens HP15 | 0.50 | HP15_1567 | | two component transcriptional regulator, LuxR family | 0.45 | HP15_2510 | | flagellar motor protein MotA | low | > 73 |
| Pseudomonas fluorescens FW300-N1B4 | 0.50 | Pf1N1B4_5619 | | BarA-associated response regulator UvrY (= GacA = SirA) | 0.41 | Pf1N1B4_1429 | | Flagellar motor rotation protein MotA | low | > 87 |
| Pseudomonas fluorescens FW300-N2C3 | 0.50 | AO356_00355 | | chemotaxis protein CheY | 0.41 | AO356_08710 | | flagellar motor stator protein MotA | low | > 104 |
| Pseudomonas fluorescens GW456-L13 | 0.50 | PfGW456L13_2885 | | BarA-associated response regulator UvrY (= GacA = SirA) | 0.41 | PfGW456L13_168 | | Flagellar motor rotation protein MotA | low | > 87 |
| Dyella japonica UNC79MFTsu3.2 | 0.40 | ABZR86_RS02715 | | response regulator | 0.43 | ABZR86_RS17830 | | flagellar motor stator protein MotA | low | > 74 |
| Rhodanobacter denitrificans MT42 | 0.39 | LRK55_RS17740 | | response regulator | 0.12 | LRK55_RS13340 | | flagellar motor protein | low | > 63 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.38 | Xcc-8004.2612.1 | | BarA-associated response regulator UvrY (= GacA = SirA) | 0.41 | Xcc-8004.4626.1 | | Flagellar motor rotation protein MotA | low | > 74 |
| Ralstonia solanacearum GMI1000 | 0.38 | RS_RS01435 | | DNA-binding response regulator | 0.65 | RS_RS23935 | | flagellar motor stator protein MotA | low | > 80 |
| Ralstonia solanacearum IBSBF1503 | 0.38 | RALBFv3_RS10600 | | DNA-binding response regulator | 0.65 | RALBFv3_RS17375 | | flagellar motor stator protein MotA | low | > 76 |
| Ralstonia solanacearum UW163 | 0.38 | UW163_RS02980 | | DNA-binding response regulator | 0.65 | UW163_RS21775 | | flagellar motor stator protein MotA | — | — |
| Ralstonia solanacearum PSI07 | 0.38 | RPSI07_RS22720 | | DNA-binding response regulator | 0.64 | RPSI07_RS06270 | | flagellar motor stator protein MotA | low | > 81 |
| Rhodanobacter sp. FW510-T8 | 0.38 | OKGIIK_07415 | | DNA-binding response regulator | 0.11 | OKGIIK_02850 | motC | flagellar motor protein | low | > 52 |
| Ralstonia sp. UNC404CL21Col | 0.38 | ABZR87_RS06400 | | response regulator transcription factor | 0.64 | ABZR87_RS17945 | | flagellar motor stator protein MotA | low | > 80 |
| Lysobacter sp. OAE881 | 0.37 | ABIE51_RS11810 | | response regulator | 0.49 | ABIE51_RS03720 | | flagellar motor stator protein MotA | low | > 62 |
| Variovorax sp. SCN45 | 0.37 | GFF2564 | | Two-component transcriptional response regulator, LuxR family | 0.62 | GFF5761 | | Flagellar motor rotation protein MotA | low | > 127 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.36 | GFF2789 | | DNA-binding response regulator, LuxR family | 0.52 | GFF1437 | | Flagellar motor rotation protein MotA | low | > 90 |
| Cupriavidus basilensis FW507-4G11 | 0.36 | RR42_RS00785 | | LuxR family transcriptional regulator | 0.67 | RR42_RS35815 | | flagellar motor protein MotA | low | > 128 |
| Acidovorax sp. GW101-3H11 | 0.36 | Ac3H11_3852 | | DNA-binding response regulator, LuxR family | 0.47 | Ac3H11_1389 | | Flagellar motor rotation protein MotA | — | — |
| Herbaspirillum seropedicae SmR1 | 0.36 | HSERO_RS13890 | | LuxR family transcriptional regulator | 0.68 | HSERO_RS14975 | | flagellar motor protein MotA | 0.94 | 12 |
| Burkholderia phytofirmans PsJN | 0.35 | BPHYT_RS13150 | | hisitidine kinase | 0.65 | BPHYT_RS19015 | | flagellar motor protein MotA | — | — |
| Rhodanobacter denitrificans FW104-10B01 | 0.34 | LRK54_RS17520 | | response regulator | 0.13 | LRK54_RS13600 | | flagellar motor protein | low | > 59 |
| Paraburkholderia sabiae LMG 24235 | 0.34 | QEN71_RS05525 | | response regulator transcription factor | 0.65 | QEN71_RS29025 | | flagellar motor stator protein MotA | low | > 153 |
| Magnetospirillum magneticum AMB-1 | 0.29 | AMB_RS06830 | | DNA-binding response regulator | 0.36 | AMB_RS12975 | | flagellar motor stator protein MotA | low | > 64 |
| Dinoroseobacter shibae DFL-12 | 0.27 | Dshi_2345 | | two component transcriptional regulator, LuxR family (RefSeq) | 0.31 | Dshi_3260 | | chemotaxis protein MotA (RefSeq) | low | > 64 |
| Azospirillum sp. SherDot2 | 0.26 | MPMX19_03688 | | Response regulator UvrY | 0.38 | MPMX19_02460 | | Motility protein A | low | > 112 |
| Desulfovibrio vulgaris Miyazaki F | 0.26 | DvMF_1021 | | two component transcriptional regulator, LuxR family (RefSeq) | 0.34 | DvMF_1085 | | flagellar motor protein MotA (RefSeq) | 0.56 | 33 |
| Rhizobium sp. OAE497 | 0.26 | ABIE40_RS23610 | | response regulator transcription factor | 0.40 | ABIE40_RS02950 | | flagellar motor stator protein MotA | low | > 107 |
| Azospirillum brasilense Sp245 | 0.26 | AZOBR_RS27860 | | regulator | 0.40 | AZOBR_RS30520 | | flagellar motor protein MotA | low | > 97 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.26 | DVU2577 | | DNA-binding response regulator, LuxR family (TIGR) | 0.33 | DVU2608 | motA-3 | chemotaxis protein MotA (TIGR) | low | > 55 |
| Sinorhizobium meliloti 1021 | 0.25 | SM_b21520 | | two-component response regulator protein | 0.35 | SMc03022 | | flagellar motor protein MotA | low | > 103 |
Not shown: 16 genomes with orthologs for HER17_RS07710 only; 13 genomes with orthologs for HER17_RS08090 only