Conservation of cofitness between HER17_RS02805 and HER17_RS05385 in Pectobacterium carotovorum WPP14

64 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS02805 threonine synthase 1.0 HER17_RS05385 bifunctional chorismate mutase/prephenate dehydratase 0.93 17
Dickeya dadantii 3937 0.88 DDA3937_RS18405 threonine synthase 0.88 DDA3937_RS16130 bifunctional chorismate mutase/prephenate dehydratase low > 74
Dickeya dianthicola 67-19 0.87 HGI48_RS18335 threonine synthase 0.88 HGI48_RS16250 bifunctional chorismate mutase/prephenate dehydratase 0.74 6
Dickeya dianthicola ME23 0.87 DZA65_RS19475 threonine synthase 0.88 DZA65_RS17345 bifunctional chorismate mutase/prephenate dehydratase 0.71 10
Rahnella sp. WP5 0.86 EX31_RS03935 threonine synthase 0.80 EX31_RS07585 bifunctional chorismate mutase/prephenate dehydratase 0.98 11
Serratia liquefaciens MT49 0.86 IAI46_03040 threonine synthase 0.85 IAI46_03965 bifunctional chorismate mutase/prephenate dehydratase 0.71 38
Pantoea sp. MT58 0.83 IAI47_16205 threonine synthase 0.75 IAI47_04410 bifunctional chorismate mutase/prephenate dehydratase 0.92 29
Erwinia tracheiphila SCR3 0.82 LU632_RS02620 thrC threonine synthase 0.73 LU632_RS16960 pheA bifunctional chorismate mutase/prephenate dehydratase — —
Enterobacter asburiae PDN3 0.82 EX28DRAFT_3616 threonine synthase 0.78 EX28DRAFT_2699 chorismate mutase (EC 5.4.99.5) 0.59 10
Enterobacter sp. TBS_079 0.82 MPMX20_00712 Threonine synthase 0.78 MPMX20_03466 Bifunctional chorismate mutase/prephenate dehydratase 0.90 34
Klebsiella michiganensis M5al 0.81 BWI76_RS04255 threonine synthase 0.76 BWI76_RS21465 bifunctional chorismate mutase/prephenate dehydratase 0.88 38
Escherichia coli ECRC102 0.79 NIAGMN_08950 thrC threonine synthase 0.77 NIAGMN_18995 pheA bifunctional chorismate mutase/prephenate dehydratase — —
Escherichia coli ECRC100 0.79 OKFHMN_11100 thrC threonine synthase 0.77 OKFHMN_21225 pheA bifunctional chorismate mutase/prephenate dehydratase 0.98 24
Escherichia coli BL21 0.79 ECD_00004 L-threonine synthase 0.77 ECD_02488 chorismate mutase and prephenate dehydratase, P-protein 0.87 34
Escherichia coli ECRC62 0.79 BNILDI_08170 thrC threonine synthase 0.77 BNILDI_11705 pheA bifunctional chorismate mutase/prephenate dehydratase 0.89 33
Escherichia coli ECRC101 0.79 MCAODC_01615 thrC threonine synthase 0.77 MCAODC_11755 pheA bifunctional chorismate mutase/prephenate dehydratase 0.90 11
Escherichia coli ECRC98 0.79 JDDGAC_14695 thrC threonine synthase 0.77 JDDGAC_24890 pheA bifunctional chorismate mutase/prephenate dehydratase 0.86 31
Escherichia fergusonii Becca 0.79 EFB2_04039 Threonine synthase 0.77 EFB2_01293 Bifunctional chorismate mutase/prephenate dehydratase low > 86
Escherichia coli ECRC99 0.79 KEDOAH_17055 thrC threonine synthase 0.77 KEDOAH_06995 pheA bifunctional chorismate mutase/prephenate dehydratase — —
Escherichia coli ECOR38 0.79 HEPCGN_09105 thrC threonine synthase 0.77 HEPCGN_20345 pheA bifunctional chorismate mutase/prephenate dehydratase 0.90 35
Escherichia coli ECOR27 0.79 NOLOHH_03430 thrC threonine synthase 0.77 NOLOHH_12900 pheA bifunctional chorismate mutase/prephenate dehydratase 0.97 10
Escherichia coli HS(pFamp)R (ATCC 700891) 0.79 OHPLBJKB_03656 Threonine synthase 0.77 OHPLBJKB_01109 P-protein low > 73
Escherichia coli BW25113 0.79 b0004 thrC threonine synthase (NCBI) 0.77 b2599 pheA fused chorismate mutase P/prephenate dehydratase (NCBI) 0.87 40
Escherichia coli Nissle 1917 0.79 ECOLIN_RS00020 threonine synthase 0.77 ECOLIN_RS14695 bifunctional chorismate mutase/prephenate dehydratase low > 55
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.79 GFF1080 Threonine synthase (EC 4.2.3.1) 0.74 GFF4179 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) low > 78
Vibrio cholerae E7946 ATCC 55056 0.69 CSW01_11965 threonine synthase 0.56 CSW01_03680 bifunctional chorismate mutase/prephenate dehydratase low > 62
Alteromonas macleodii MIT1002 0.62 MIT1002_03084 Threonine synthase 0.54 MIT1002_01316 P-protein 0.88 50
Xanthomonas campestris pv. campestris strain 8004 0.30 Xcc-8004.2954.1 Threonine synthase (EC 4.2.3.1) 0.18 Xcc-8004.3282.1 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) 0.92 11
Lysobacter sp. OAE881 0.29 ABIE51_RS17530 threonine synthase 0.20 ABIE51_RS12145 prephenate dehydratase 0.95 24
Pseudomonas fluorescens FW300-N2C3 0.28 AO356_06370 threonine synthase 0.21 AO356_03465 prephenate dehydratase — —
Pseudomonas fluorescens FW300-N2E2 0.28 Pf6N2E2_3142 Threonine synthase (EC 4.2.3.1) 0.21 Pf6N2E2_2520 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) — —
Pseudomonas fluorescens FW300-N2E3 0.28 AO353_04350 threonine synthase 0.20 AO353_02070 prephenate dehydratase — —
Pseudomonas putida KT2440 0.28 PP_1471 Threonine synthase 0.20 PP_1769 chorismate mutase/Prephenate dehydratase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.28 Psyr_1291 L-threonine synthase 0.20 Psyr_3645 prephenate dehydratase — —
Rhodanobacter denitrificans MT42 0.28 LRK55_RS09995 threonine synthase 0.20 LRK55_RS00135 prephenate dehydratase low > 63
Pseudomonas syringae pv. syringae B728a 0.28 Psyr_1291 L-threonine synthase 0.20 Psyr_3645 prephenate dehydratase — —
Rhodanobacter denitrificans FW104-10B01 0.28 LRK54_RS10355 threonine synthase 0.20 LRK54_RS00395 prephenate dehydratase low > 59
Pseudomonas fluorescens FW300-N1B4 0.28 Pf1N1B4_3014 Threonine synthase (EC 4.2.3.1) 0.20 Pf1N1B4_350 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) — —
Pseudomonas sp. S08-1 0.28 OH686_17765 threonine synthase 0.20 OH686_20870 Chorismate mutase I / Prephenate dehydratase low > 80
Pseudomonas fluorescens GW456-L13 0.28 PfGW456L13_1724 Threonine synthase (EC 4.2.3.1) 0.20 PfGW456L13_2176 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) — —
Pseudomonas simiae WCS417 0.28 PS417_22880 threonine synthase 0.21 PS417_08125 prephenate dehydratase — —
Pseudomonas fluorescens SBW25-INTG 0.27 PFLU_RS24545 threonine synthase 0.21 PFLU_RS08095 prephenate dehydratase — —
Pseudomonas sp. RS175 0.27 PFR28_00334 Threonine synthase 0.21 PFR28_00907 Bifunctional chorismate mutase/prephenate dehydratase — —
Pseudomonas fluorescens SBW25 0.27 PFLU_RS24545 threonine synthase 0.21 PFLU_RS08095 prephenate dehydratase — —
Dyella japonica UNC79MFTsu3.2 0.27 ABZR86_RS15975 threonine synthase (EC 4.2.3.1) (from data) 0.19 ABZR86_RS02225 prephenate dehydratase 0.97 10
Rhodanobacter sp. FW510-T8 0.27 OKGIIK_13570 thrC threonine synthase 0.19 OKGIIK_06915 pheA prephenate dehydratase low > 52
Pseudomonas stutzeri RCH2 0.27 Psest_3125 threonine synthase 0.20 Psest_1984 chorismate mutase domain of proteobacterial P-protein, clade 2 — —
Marinobacter adhaerens HP15 0.25 HP15_765 threonine synthase 0.20 HP15_1362 chorismate mutase / prephenate dehydratase — —
Castellaniella sp019104865 MT123 0.24 ABCV34_RS02300 threonine synthase 0.19 ABCV34_RS07110 prephenate dehydratase — —
Dechlorosoma suillum PS 0.23 Dsui_2904 threonine synthase 0.18 Dsui_1940 chorismate mutase, clade 2 — —
Variovorax sp. OAS795 0.22 ABID97_RS25760 threonine synthase 0.18 ABID97_RS09515 prephenate dehydratase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.22 GFF3936 Threonine synthase (EC 4.2.3.1) 0.18 GFF5343 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) — —
Ralstonia sp. UNC404CL21Col 0.22 ABZR87_RS05865 threonine synthase 0.19 ABZR87_RS09450 prephenate dehydratase low > 80
Paraburkholderia sabiae LMG 24235 0.22 QEN71_RS22400 threonine synthase 0.21 QEN71_RS04070 prephenate dehydratase 0.81 25
Variovorax sp. SCN45 0.21 GFF2800 Threonine synthase (EC 4.2.3.1) 0.18 GFF6182 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) — —
Herbaspirillum seropedicae SmR1 0.21 HSERO_RS10470 threonine synthase 0.20 HSERO_RS18430 chorismate mutase — —
Acidovorax sp. GW101-3H11 0.21 Ac3H11_1505 Threonine synthase (EC 4.2.3.1) 0.19 Ac3H11_2574 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) — —
Paraburkholderia graminis OAS925 0.21 ABIE53_002027 threonine synthase 0.20 ABIE53_003157 chorismate mutase/prephenate dehydratase — —
Cupriavidus basilensis FW507-4G11 0.21 RR42_RS12535 threonine synthase 0.22 RR42_RS04460 chorismate mutase — —
Paraburkholderia bryophila 376MFSha3.1 0.21 H281DRAFT_00811 L-threonine synthase 0.21 H281DRAFT_03925 chorismate mutase — —
Ralstonia solanacearum GMI1000 0.20 RS_RS06660 threonine synthase 0.19 RS_RS04495 prephenate dehydratase — —
Burkholderia phytofirmans PsJN 0.20 BPHYT_RS08960 threonine synthase 0.21 BPHYT_RS14910 chorismate mutase 0.60 82
Ralstonia solanacearum IBSBF1503 0.20 RALBFv3_RS15880 threonine synthase 0.20 RALBFv3_RS13760 chorismate mutase — —
Ralstonia solanacearum UW163 0.20 UW163_RS13325 threonine synthase 0.20 UW163_RS16050 chorismate mutase — —
Ralstonia solanacearum PSI07 0.19 RPSI07_RS17485 threonine synthase 0.20 RPSI07_RS19710 prephenate dehydratase — —

Not shown: 29 genomes with orthologs for HER17_RS02805 only; 4 genomes with orthologs for HER17_RS05385 only