Conservation of cofitness between HEPCGN_18810 and HEPCGN_22570 in Escherichia coli ECOR38

61 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECOR38 1.0 HEPCGN_18810 gcvT glycine cleavage system aminomethyltransferase GcvT 1.0 HEPCGN_22570 ccmF cytochrome c-type biogenesis heme lyase CcmF 0.58 51
Escherichia coli Nissle 1917 1.00 ECOLIN_RS16175 glycine cleavage system aminomethyltransferase GcvT 1.00 ECOLIN_RS12835 cytochrome c-type biogenesis heme lyase CcmF — —
Escherichia fergusonii Becca 1.00 EFB2_00997 Aminomethyltransferase 1.00 EFB2_01660 Cytochrome c-type biogenesis protein CcmF 0.35 48
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_00810 Aminomethyltransferase 0.99 OHPLBJKB_01515 Cytochrome c-type biogenesis protein CcmF low > 73
Escherichia coli ECRC62 0.99 BNILDI_09970 gcvT glycine cleavage system aminomethyltransferase GcvT 0.99 BNILDI_13800 ccmF cytochrome c-type biogenesis heme lyase CcmF low > 75
Escherichia coli BL21 0.99 ECD_02737 aminomethyltransferase, tetrahydrofolate-dependent, subunit (T protein) of glycine cleavage complex 0.99 ECD_02123 heme lyase, CcmF subunit low > 61
Escherichia coli ECOR27 0.99 NOLOHH_11435 gcvT glycine cleavage system aminomethyltransferase GcvT 0.99 NOLOHH_14880 ccmF cytochrome c-type biogenesis heme lyase CcmF low > 75
Escherichia coli BW25113 0.99 b2905 gcvT glycine cleavage system aminomethyltransferase T (NCBI) 0.99 b2196 ccmF heme lyase, CcmF subunit (NCBI) low > 76
Escherichia coli ECRC101 0.99 MCAODC_10040 gcvT glycine cleavage system aminomethyltransferase GcvT 0.99 MCAODC_14355 ccmF cytochrome c-type biogenesis heme lyase CcmF low > 87
Escherichia coli ECRC100 0.99 OKFHMN_19520 gcvT glycine cleavage system aminomethyltransferase GcvT 0.99 OKFHMN_23305 ccmF cytochrome c-type biogenesis heme lyase CcmF low > 80
Escherichia coli ECRC98 0.99 JDDGAC_23160 gcvT glycine cleavage system aminomethyltransferase GcvT 0.99 JDDGAC_27265 ccmF cytochrome c-type biogenesis heme lyase CcmF low > 86
Escherichia coli ECRC102 0.99 NIAGMN_17285 gcvT glycine cleavage system aminomethyltransferase GcvT 0.99 NIAGMN_21070 ccmF cytochrome c-type biogenesis heme lyase CcmF — —
Escherichia coli ECRC99 0.99 KEDOAH_08620 gcvT glycine cleavage system aminomethyltransferase GcvT 0.99 KEDOAH_04880 ccmF cytochrome c-type biogenesis heme lyase CcmF — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.95 GFF3005 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) 0.83 GFF4877 Cytochrome c heme lyase subunit CcmF — —
Serratia liquefaciens MT49 0.86 IAI46_20860 glycine cleavage system aminomethyltransferase GcvT 0.72 IAI46_18085 heme lyase CcmF/NrfE family subunit low > 86
Rahnella sp. WP5 0.84 EX31_RS21510 glycine cleavage system aminomethyltransferase GcvT 0.73 EX31_RS19745 heme lyase CcmF/NrfE family subunit low > 89
Pantoea sp. MT58 0.82 IAI47_03765 glycine cleavage system aminomethyltransferase GcvT 0.69 IAI47_06090 heme lyase CcmF/NrfE family subunit low > 76
Pectobacterium carotovorum WPP14 0.78 HER17_RS18005 glycine cleavage system aminomethyltransferase GcvT 0.73 HER17_RS09055 heme lyase CcmF/NrfE family subunit low > 75
Shewanella amazonensis SB2B 0.71 Sama_2721 gcvT glycine cleavage system aminomethyltransferase T (RefSeq) 0.49 Sama_0248 cytochrome c-type biogenesis protein CcmF (RefSeq) low > 62
Shewanella oneidensis MR-1 0.70 SO0779 gcvT glycine cleavage system T protein (NCBI ptt file) 0.47 SO0266 ccmF-1 cytochrome c-type biogenesis protein CcmF (NCBI ptt file) low > 76
Alteromonas macleodii MIT1002 0.69 MIT1002_02973 Aminomethyltransferase 0.55 MIT1002_00965 Cytochrome c-type biogenesis protein CcmF — —
Shewanella sp. ANA-3 0.69 Shewana3_3501 gcvT glycine cleavage system aminomethyltransferase T (RefSeq) 0.47 Shewana3_0234 cytochrome c-type biogenesis protein CcmF (RefSeq) low > 73
Shewanella loihica PV-4 0.69 Shew_3064 gcvT glycine cleavage system aminomethyltransferase T (RefSeq) 0.49 Shew_0193 cytochrome c-type biogenesis protein CcmF (RefSeq) low > 60
Kangiella aquimarina DSM 16071 0.61 B158DRAFT_0543 glycine cleavage system T protein 0.52 B158DRAFT_1328 c-type cytochrome biogenesis protein CcmF — —
Pseudomonas stutzeri RCH2 0.57 Psest_0181 glycine cleavage system T protein 0.48 Psest_1759 c-type cytochrome biogenesis protein CcmF — —
Pseudomonas sp. S08-1 0.57 OH686_11175 glycine cleavage system T protein 0.49 OH686_02635 cytochrome c-type biogenesis protein CcmF — —
Dyella japonica UNC79MFTsu3.2 0.55 ABZR86_RS18875 glycine cleavage system aminomethyltransferase GcvT 0.47 ABZR86_RS06445 heme lyase CcmF/NrfE family subunit — —
Pseudomonas syringae pv. syringae B728a 0.55 Psyr_0246 aminomethyltransferase 0.49 Psyr_3388 Cytochrome c-type biogenesis protein CcmF — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.55 Psyr_0246 aminomethyltransferase 0.49 Psyr_3388 Cytochrome c-type biogenesis protein CcmF — —
Pseudomonas simiae WCS417 0.54 PS417_27255 glycine cleavage system protein T 0.49 PS417_08715 cytochrome C biogenesis protein CcmF — —
Pseudomonas fluorescens GW456-L13 0.54 PfGW456L13_902 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) 0.50 PfGW456L13_4311 Cytochrome c heme lyase subunit CcmF — —
Pseudomonas fluorescens SBW25-INTG 0.54 PFLU_RS28915 glycine cleavage system aminomethyltransferase GcvT 0.49 PFLU_RS08670 heme lyase CcmF/NrfE family subunit low > 109
Pseudomonas fluorescens SBW25 0.54 PFLU_RS28915 glycine cleavage system aminomethyltransferase GcvT 0.49 PFLU_RS08670 heme lyase CcmF/NrfE family subunit low > 109
Lysobacter sp. OAE881 0.54 ABIE51_RS16365 glycine cleavage system aminomethyltransferase GcvT 0.46 ABIE51_RS08700 heme lyase CcmF/NrfE family subunit low > 62
Rhodanobacter sp. FW510-T8 0.53 OKGIIK_01305 gcvT glycine cleavage system aminomethyltransferase GcvT 0.46 OKGIIK_08585 ccmF c-type cytochrome biogenesis protein CcmF — —
Pseudomonas fluorescens FW300-N2E2 0.53 Pf6N2E2_4485 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) 0.49 Pf6N2E2_2555 Cytochrome c heme lyase subunit CcmF — —
Pseudomonas putida KT2440 0.53 PP_5194 aminomethyltransferase 0.48 PP_4322 holocytochrome c synthetase — —
Rhodanobacter denitrificans FW104-10B01 0.53 LRK54_RS05510 glycine cleavage system aminomethyltransferase GcvT 0.47 LRK54_RS16065 heme lyase CcmF/NrfE family subunit — —
Rhodanobacter denitrificans MT42 0.53 LRK55_RS05280 glycine cleavage system aminomethyltransferase GcvT 0.47 LRK55_RS15815 heme lyase CcmF/NrfE family subunit — —
Xanthomonas campestris pv. campestris strain 8004 0.53 Xcc-8004.1567.1 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) 0.45 Xcc-8004.2342.1 Cytochrome c heme lyase subunit CcmF — —
Pseudomonas fluorescens FW300-N2C3 0.53 AO356_13035 glycine cleavage system protein T 0.49 AO356_03635 cytochrome C biogenesis protein CcmF — —
Pseudomonas sp. RS175 0.53 PFR28_04316 Aminomethyltransferase 0.49 PFR28_00870 Cytochrome c-type biogenesis protein CcmF — —
Pseudomonas fluorescens FW300-N2E3 0.52 AO353_08735 glycine cleavage system protein T 0.49 AO353_18875 cytochrome C biogenesis protein CcmF — —
Dechlorosoma suillum PS 0.51 Dsui_2735 glycine cleavage system T protein 0.51 Dsui_1172 c-type cytochrome biogenesis protein CcmF — —
Caulobacter crescentus NA1000 0.26 CCNA_03465 glycine cleavage system aminomethyltransferase T 0.35 CCNA_02848 heme chaperone-apocytochrome heme-lyase low > 66
Caulobacter crescentus NA1000 Δfur 0.26 CCNA_03465 glycine cleavage system aminomethyltransferase T 0.35 CCNA_02848 heme chaperone-apocytochrome heme-lyase low > 67
Phaeobacter inhibens DSM 17395 0.25 PGA1_78p00290 aminomethyltransferase GcvT 0.38 PGA1_c17010 cytochrome c-type biogenesis protein CcmF — —
Rhodopseudomonas palustris CGA009 0.25 TX73_019925 glycine cleavage system aminomethyltransferase GcvT 0.40 TX73_009900 heme lyase CcmF/NrfE family subunit — —
Magnetospirillum magneticum AMB-1 0.25 AMB_RS03925 glycine cleavage system protein T 0.45 AMB_RS21250 heme lyase CcmF/NrfE family subunit — —
Vibrio cholerae E7946 ATCC 55056 0.24 CSW01_15350 glycine cleavage system aminomethyltransferase T 0.64 CSW01_10265 c-type cytochrome biogenesis protein CcmF low > 62
Rhodospirillum rubrum S1H 0.24 Rru_A3051 Glycine cleavage system T protein (NCBI) 0.40 Rru_A0035 Cytochrome c-type biogenesis protein CcmF (NCBI) — —
Desulfovibrio vulgaris Miyazaki F 0.24 DvMF_0341 glycine cleavage system T protein (RefSeq) 0.21 DvMF_3132 cytochrome c assembly protein (RefSeq) — —
Brevundimonas sp. GW460-12-10-14-LB2 0.23 A4249_RS09325 glycine cleavage system aminomethyltransferase GcvT 0.35 A4249_RS10825 heme lyase CcmF/NrfE family subunit — —
Desulfovibrio vulgaris Hildenborough JW710 0.23 DVU1684 gcvT glycine cleavage system T protein (TIGR) 0.22 DVU1050 ccmF cytochrome c-type biogenesis protein CcmF (TIGR) — —
Sinorhizobium meliloti 1021 0.23 SMc02047 glycine cleavage system aminomethyltransferase T 0.39 SMc02363 cytochrome C-type biogenesis transmembrane protein low > 103
Rhizobium sp. OAE497 0.23 ABIE40_RS09940 glycine cleavage system aminomethyltransferase GcvT 0.40 ABIE40_RS05685 heme lyase CcmF/NrfE family subunit low > 107
Agrobacterium fabrum C58 0.22 Atu1464 glycine cleavage system T protein, aminomethyltransferase 0.40 Atu0975 cytochrome c-type synthesis protein — —
Azospirillum sp. SherDot2 0.21 MPMX19_01029 Aminomethyltransferase 0.41 MPMX19_02533 Cytochrome c-type biogenesis protein CcmF — —
Sphingomonas koreensis DSMZ 15582 0.21 Ga0059261_3256 glycine cleavage system T protein 0.31 Ga0059261_0172 Cytochrome c biogenesis factor low > 68
Bosea sp. OAE506 0.21 ABIE41_RS22930 glycine cleavage system aminomethyltransferase GcvT 0.39 ABIE41_RS21455 heme lyase CcmF/NrfE family subunit — —
Azospirillum brasilense Sp245 0.20 AZOBR_RS10470 aminomethyltransferase 0.42 AZOBR_RS00740 heme lyase subunit CcmF — —
Dinoroseobacter shibae DFL-12 0.20 Dshi_2682 glycine cleavage system T protein (RefSeq) 0.41 Dshi_3411 cytochrome c-type biogenesis protein CcmF (RefSeq) low > 64

Not shown: 33 genomes with orthologs for HEPCGN_18810 only; 2 genomes with orthologs for HEPCGN_22570 only