| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas stutzeri RCH2 | 1.0 | Psest_2285 | | ATP-dependent protease La | 1.0 | Psest_0956 | | Transcriptional regulators | 0.32 | 7 |
| Pseudomonas fluorescens GW456-L13 | 0.91 | PfGW456L13_2554 | | ATP-dependent protease La (EC 3.4.21.53) Type I | 0.78 | PfGW456L13_5113 | | Lactate-responsive regulator LldR in Enterobacteria, GntR family | low | > 87 |
| Pseudomonas fluorescens FW300-N2C3 | 0.91 | AO356_01740 | | DNA-binding protein | 0.77 | AO356_07545 | | transcriptional regulator PdhR | low | > 104 |
| Pseudomonas sp. RS175 | 0.91 | PFR28_01230 | | Lon protease | 0.77 | PFR28_00064 | | Pyruvate dehydrogenase complex repressor | low | > 88 |
| Pseudomonas fluorescens FW300-N2E2 | 0.91 | Pf6N2E2_2216 | | ATP-dependent protease La (EC 3.4.21.53) Type I | 0.77 | Pf6N2E2_3379 | | Lactate-responsive regulator LldR in Enterobacteria, GntR family | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.91 | AO353_20185 | | DNA-binding protein | 0.78 | AO353_05695 | | transcriptional regulator PdhR | low | > 101 |
| Pseudomonas fluorescens FW300-N1B4 | 0.91 | Pf1N1B4_3947 | | ATP-dependent protease La (EC 3.4.21.53) Type I | 0.78 | Pf1N1B4_1185 | | Lactate-responsive regulator LldR in Enterobacteria, GntR family | — | — |
| Pseudomonas simiae WCS417 | 0.90 | PS417_17225 | | DNA-binding protein | 0.74 | PS417_24100 | | transcriptional regulator PdhR | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.90 | PFLU_RS19160 | | endopeptidase La | 0.79 | PFLU_RS25940 | | FCD domain-containing protein | low | > 109 |
| Pseudomonas sp. S08-1 | 0.90 | OH686_03635 | | endopeptidase La | 0.75 | OH686_17020 | | Lactate-responsive regulator LldR in Enterobacteria, GntR family | low | > 80 |
| Pseudomonas fluorescens SBW25 | 0.90 | PFLU_RS19160 | | endopeptidase La | 0.79 | PFLU_RS25940 | | FCD domain-containing protein | low | > 109 |
| Pseudomonas putida KT2440 | 0.88 | PP_2302 | | DNA-binding, ATP-dependent protease | 0.75 | PP_4734 | | DNA-binding transcriptional dual regulator, LldR-L-lactate | low | > 96 |
| Marinobacter adhaerens HP15 | 0.71 | HP15_2183 | | DNA-binding ATP-dependent protease La | 0.60 | HP15_4087 | | transcriptional regulator, GntR family | low | > 73 |
| Shewanella loihica PV-4 | 0.70 | Shew_2506 | | ATP-dependent protease La (RefSeq) | 0.38 | Shew_3432 | pdhR | transcriptional regulator PdhR (RefSeq) | — | — |
| Shewanella oneidensis MR-1 | 0.70 | SO1796 | lon | ATP-dependent protease La (NCBI ptt file) | 0.39 | SO0423 | pdhR | pyruvate dehydrogenase complex repressor (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.70 | Shewana3_2659 | | Lon-A peptidase (RefSeq) | 0.39 | Shewana3_0425 | pdhR | transcriptional regulator PdhR (RefSeq) | — | — |
| Dickeya dadantii 3937 | 0.69 | DDA3937_RS05650 | | endopeptidase La | 0.40 | DDA3937_RS17930 | | pyruvate dehydrogenase complex transcriptional repressor PdhR | 0.36 | 55 |
| Dickeya dianthicola 67-19 | 0.69 | HGI48_RS05695 | | endopeptidase La | 0.40 | HGI48_RS17855 | | pyruvate dehydrogenase complex transcriptional repressor PdhR | low | > 71 |
| Dickeya dianthicola ME23 | 0.69 | DZA65_RS06020 | | endopeptidase La | 0.40 | DZA65_RS19005 | | pyruvate dehydrogenase complex transcriptional repressor PdhR | low | > 75 |
| Klebsiella michiganensis M5al | 0.69 | BWI76_RS06535 | | endopeptidase La | 0.40 | BWI76_RS04875 | | transcriptional regulator PdhR | low | > 92 |
| Serratia liquefaciens MT49 | 0.69 | IAI46_05020 | | endopeptidase La | 0.41 | IAI46_21330 | | pyruvate dehydrogenase complex transcriptional repressor PdhR | low | > 86 |
| Pectobacterium carotovorum WPP14 | 0.69 | HER17_RS15840 | | endopeptidase La | 0.39 | HER17_RS03285 | | pyruvate dehydrogenase complex transcriptional repressor PdhR | — | — |
| Rahnella sp. WP5 | 0.69 | EX31_RS22255 | | endopeptidase La | 0.40 | EX31_RS03485 | | pyruvate dehydrogenase complex transcriptional repressor PdhR | 0.56 | 67 |
| Shewanella amazonensis SB2B | 0.69 | Sama_1226 | | endopeptidase La (RefSeq) | 0.39 | Sama_0374 | pdhR | transcriptional regulator PdhR (RefSeq) | low | > 62 |
| Enterobacter sp. TBS_079 | 0.68 | MPMX20_01030 | | Lon protease | 0.41 | MPMX20_00806 | | Pyruvate dehydrogenase complex repressor | low | > 85 |
| Erwinia tracheiphila SCR3 | 0.68 | LU632_RS18335 | lon | endopeptidase La | 0.39 | LU632_RS03075 | pdhR | pyruvate dehydrogenase complex transcriptional repressor PdhR | — | — |
| Enterobacter asburiae PDN3 | 0.68 | EX28DRAFT_2531 | | endopeptidase La | 0.41 | EX28DRAFT_3708 | | Transcriptional regulators | low | > 76 |
| Pantoea sp. MT58 | 0.68 | IAI47_14645 | | endopeptidase La | 0.40 | IAI47_15815 | | pyruvate dehydrogenase complex transcriptional repressor PdhR | — | — |
| Escherichia coli ECOR27 | 0.68 | NOLOHH_01255 | lon_P403L | Lon protease | 0.41 | NOLOHH_02855 | pdhR | pyruvate dehydrogenase complex transcriptional repressor PdhR | low | > 57 |
| Vibrio cholerae E7946 ATCC 55056 | 0.68 | CSW01_09605 | | endopeptidase La | 0.38 | CSW01_12225 | | pyruvate dehydrogenase complex transcriptional repressor PdhR | low | > 62 |
| Escherichia coli BW25113 | 0.68 | b0439 | lon | DNA-binding ATP-dependent protease La (NCBI) | 0.41 | b0113 | pdhR | transcriptional regulator of pyruvate dehydrogenase complex (NCBI) | low | > 76 |
| Escherichia coli BL21 | 0.68 | ECD_00391 | | DNA-binding ATP-dependent protease La | 0.41 | ECD_00112 | | pyruvate dehydrogenase complex repressor; autorepressor | low | > 60 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.68 | GFF4355 | | ATP-dependent protease La (EC 3.4.21.53) Type I | 0.41 | GFF123 | | Transcriptional repressor for pyruvate dehydrogenase complex | low | > 78 |
| Escherichia coli ECOR38 | 0.68 | HEPCGN_06935 | lon_P403L | Lon protease | 0.41 | HEPCGN_08490 | pdhR | pyruvate dehydrogenase complex transcriptional repressor PdhR | low | > 85 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.68 | OHPLBJKB_03234 | | Lon protease | 0.41 | OHPLBJKB_03548 | | Pyruvate dehydrogenase complex repressor | low | > 73 |
| Escherichia coli Nissle 1917 | 0.68 | ECOLIN_RS02635 | | endopeptidase La | 0.41 | ECOLIN_RS00635 | | pyruvate dehydrogenase complex transcriptional repressor PdhR | low | > 52 |
| Alteromonas macleodii MIT1002 | 0.68 | MIT1002_02757 | | Lon protease | 0.36 | MIT1002_03004 | | Pyruvate dehydrogenase complex repressor | low | > 70 |
| Escherichia coli ECRC62 | 0.68 | BNILDI_22670 | lon_P403L | Lon protease | 0.41 | BNILDI_08755 | pdhR | pyruvate dehydrogenase complex transcriptional repressor PdhR | — | — |
| Escherichia coli ECRC99 | 0.68 | KEDOAH_19645 | | Lon protease | 0.41 | KEDOAH_17645 | pdhR | pyruvate dehydrogenase complex transcriptional repressor PdhR | — | — |
| Escherichia coli ECRC98 | 0.68 | JDDGAC_11975 | | Lon protease | 0.41 | JDDGAC_14105 | pdhR | pyruvate dehydrogenase complex transcriptional repressor PdhR | — | — |
| Escherichia coli ECRC101 | 0.68 | MCAODC_27545 | | Lon protease | 0.41 | MCAODC_01025 | pdhR | pyruvate dehydrogenase complex transcriptional repressor PdhR | — | — |
| Escherichia coli ECRC101 | 0.68 | OKFHMN_08320 | | Lon protease | 0.41 | OKFHMN_10510 | pdhR | pyruvate dehydrogenase complex transcriptional repressor PdhR | — | — |
| Escherichia coli ECRC102 | 0.68 | NIAGMN_06375 | | Lon protease | 0.41 | NIAGMN_08360 | pdhR | pyruvate dehydrogenase complex transcriptional repressor PdhR | — | — |
| Escherichia fergusonii Becca | 0.68 | EFB2_03618 | | Lon protease | 0.41 | EFB2_03932 | | Pyruvate dehydrogenase complex repressor | low | > 86 |
| Paraburkholderia sabiae LMG 24235 | 0.67 | QEN71_RS21975 | | endopeptidase La | 0.32 | QEN71_RS10135 | | FadR/GntR family transcriptional regulator | low | > 153 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.66 | H281DRAFT_00898 | | ATP-dependent proteinase. Serine peptidase. MEROPS family S16 | 0.29 | H281DRAFT_02906 | | transcriptional regulator, GntR family | — | — |
| Burkholderia phytofirmans PsJN | 0.66 | BPHYT_RS09460 | | peptidase | 0.30 | BPHYT_RS26990 | | GntR family transcriptional regulator | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.66 | RR42_RS09030 | | DNA-binding protein | 0.32 | RR42_RS21300 | | GntR family transcriptional regulator | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.65 | GFF4044 | | ATP-dependent protease La (EC 3.4.21.53) Type I | 0.18 | GFF5464 | | Transcriptional regulator, GntR family | low | > 90 |
| Castellaniella sp019104865 MT123 | 0.65 | ABCV34_RS05125 | | endopeptidase La | 0.34 | ABCV34_RS10290 | | transcriptional regulator LldR | — | — |
| Paraburkholderia graminis OAS925 | 0.64 | ABIE53_002117 | | ATP-dependent Lon protease | 0.28 | ABIE53_005884 | | GntR family transcriptional repressor for pyruvate dehydrogenase complex | low | > 113 |
| Variovorax sp. OAS795 | 0.64 | ABID97_RS17590 | | endopeptidase La | 0.17 | ABID97_RS05820 | | FadR/GntR family transcriptional regulator | low | > 91 |
| Azospirillum brasilense Sp245 | 0.63 | AZOBR_RS07145 | | peptidase | 0.24 | AZOBR_RS25130 | | GntR family transcriptional regulator | low | > 97 |
| Azospirillum sp. SherDot2 | 0.63 | MPMX19_01545 | | Lon protease | 0.29 | MPMX19_06090 | | Pyruvate dehydrogenase complex repressor | low | > 112 |
| Magnetospirillum magneticum AMB-1 | 0.63 | AMB_RS14035 | | endopeptidase La | 0.38 | AMB_RS01210 | | FCD domain-containing protein | — | — |
| Rhodospirillum rubrum S1H | 0.62 | Rru_A1552 | | Peptidase S16, ATP-dependent protease La (NCBI) | 0.24 | Rru_A1414 | | regulatory protein GntR (NCBI) | low | > 58 |
| Caulobacter crescentus NA1000 | 0.61 | CCNA_02037 | | ATP-dependent endopeptidase Lon | 0.19 | CCNA_02904 | | GntR-family transcriptional regulator | low | > 66 |
| Caulobacter crescentus NA1000 Δfur | 0.61 | CCNA_02037 | | ATP-dependent endopeptidase Lon | 0.19 | CCNA_02904 | | GntR-family transcriptional regulator | — | — |
| Rhizobium sp. OAE497 | 0.61 | ABIE40_RS07100 | | endopeptidase La | 0.17 | ABIE40_RS23960 | | FadR/GntR family transcriptional regulator | — | — |
| Sinorhizobium meliloti 1021 | 0.61 | SMc01905 | | ATP-dependent protease LA protein | 0.34 | SMc00829 | | transcriptional regulator | — | — |
| Agrobacterium fabrum C58 | 0.60 | Atu1261 | | ATP-dependent protease LA | 0.32 | Atu0662 | | transcriptional regulator, GntR family | — | — |
| Phaeobacter inhibens DSM 17395 | 0.59 | PGA1_c20540 | | ATP-dependent protease La | 0.34 | PGA1_c00760 | | putative pyruvate dehydrogenase complex repressor | — | — |
| Dinoroseobacter shibae DFL-12 | 0.59 | Dshi_1777 | | ATP-dependent protease La (RefSeq) | 0.36 | Dshi_3026 | | GntR domain protein (RefSeq) | low | > 64 |
| Acinetobacter radioresistens SK82 | 0.55 | MPMX26_02299 | | Lon protease | 0.28 | MPMX26_02258 | | Putative L-lactate dehydrogenase operon regulatory protein | low | > 36 |
| Desulfovibrio vulgaris Miyazaki F | 0.53 | DvMF_0112 | | ATP-dependent protease La (RefSeq) | 0.21 | DvMF_1205 | | GntR domain protein (RefSeq) | low | > 51 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.52 | DVU1337 | lon | ATP-dependent protease La (TIGR) | 0.22 | DVU2785 | pdhR | transcriptional regulator, GntR family (TIGR) | low | > 55 |
Not shown: 32 genomes with orthologs for Psest_2285 only; 1 genomes with orthologs for Psest_0956 only