Conservation of cofitness between PS417_23380 and PS417_03830 in Pseudomonas simiae WCS417

68 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_23380 cytochrome o ubiquinol oxidase subunit III 1.0 PS417_03830 protein disaggregation chaperone 0.36 16
Pseudomonas fluorescens SBW25 1.00 PFLU_RS25210 cytochrome o ubiquinol oxidase subunit III 0.99 PFLU_RS03880 ATP-dependent chaperone ClpB low > 109
Pseudomonas fluorescens SBW25-INTG 1.00 PFLU_RS25210 cytochrome o ubiquinol oxidase subunit III 0.99 PFLU_RS03880 ATP-dependent chaperone ClpB low > 109
Pseudomonas fluorescens FW300-N1B4 0.88 Pf1N1B4_971 Cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-) 0.96 Pf1N1B4_2824 ClpB protein low > 87
Pseudomonas fluorescens GW456-L13 0.82 PfGW456L13_4934 Cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-) 0.96 PfGW456L13_1495 ClpB protein 0.54 20
Pseudomonas fluorescens FW300-N2C3 0.81 AO356_16970 cytochrome o ubiquinol oxidase subunit III 0.97 AO356_15935 ATP-dependent chaperone ClpB low > 104
Pseudomonas sp. RS175 0.80 PFR28_00244 Cytochrome bo(3) ubiquinol oxidase subunit 3 0.97 PFR28_03746 Chaperone protein ClpB low > 88
Pseudomonas fluorescens FW300-N2E3 0.80 AO353_15460 cytochrome o ubiquinol oxidase subunit III 0.95 AO353_14230 ATP-dependent chaperone ClpB low > 101
Pseudomonas fluorescens FW300-N2E2 0.80 Pf6N2E2_5319 Cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-) 0.97 Pf6N2E2_5129 ClpB protein low > 103
Klebsiella michiganensis M5al 0.73 BWI76_RS06485 cytochrome o ubiquinol oxidase subunit III 0.70 BWI76_RS21440 ATP-dependent chaperone ClpB low > 92
Pseudomonas syringae pv. syringae B728a ΔmexB 0.71 Psyr_1143 cytochrome bo3 quinol oxidase subunit 3 0.95 Psyr_0728 AAA ATPase, central region:Clp, N terminal:Clp, N terminal
Pseudomonas syringae pv. syringae B728a 0.71 Psyr_1143 cytochrome bo3 quinol oxidase subunit 3 0.95 Psyr_0728 AAA ATPase, central region:Clp, N terminal:Clp, N terminal
Erwinia tracheiphila SCR3 0.71 LU632_RS18385 cytochrome o ubiquinol oxidase subunit III 0.70 LU632_RS16935 clpB ATP-dependent chaperone ClpB
Enterobacter asburiae PDN3 0.70 EX28DRAFT_2541 cytochrome o ubiquinol oxidase, subunit III 0.70 EX28DRAFT_2693 ATP-dependent chaperone ClpB low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.70 OHPLBJKB_03243 Cytochrome bo(3) ubiquinol oxidase subunit 3 0.70 OHPLBJKB_01114 Chaperone protein ClpB low > 73
Escherichia coli BW25113 0.70 b0430 cyoC cytochrome o ubiquinol oxidase subunit III (NCBI) 0.70 b2592 clpB protein disaggregation chaperone (NCBI) low > 76
Escherichia coli Nissle 1917 0.70 ECOLIN_RS02585 cytochrome o ubiquinol oxidase subunit III 0.70 ECOLIN_RS14665 ATP-dependent chaperone ClpB
Escherichia coli BL21 0.70 ECD_00381 cytochrome o ubiquinol oxidase subunit III 0.70 ECD_02482 protein disaggregation chaperone 0.67 30
Escherichia coli ECOR27 0.70 NOLOHH_01305 cyoC cytochrome o ubiquinol oxidase subunit III 0.70 NOLOHH_12940 clpB ATP-dependent chaperone ClpB low > 57
Escherichia coli ECOR38 0.70 HEPCGN_06985 cyoC cytochrome o ubiquinol oxidase subunit III 0.70 HEPCGN_20390 clpB ATP-dependent chaperone ClpB low > 85
Pantoea sp. MT58 0.70 IAI47_14690 cytochrome o ubiquinol oxidase subunit III 0.70 IAI47_04435 ATP-dependent chaperone ClpB low > 76
Escherichia coli ECRC62 0.70 BNILDI_22720 cyoC cytochrome o ubiquinol oxidase subunit III 0.70 BNILDI_11745 clpB ATP-dependent chaperone ClpB
Escherichia fergusonii Becca 0.70 EFB2_03627 Cytochrome bo(3) ubiquinol oxidase subunit 3 0.70 EFB2_01298 Chaperone protein ClpB low > 86
Escherichia coli ECRC101 0.70 MCAODC_27595 cyoC cytochrome o ubiquinol oxidase subunit III 0.70 MCAODC_11795 clpB ATP-dependent chaperone ClpB
Escherichia coli ECRC98 0.70 JDDGAC_12025 cyoC cytochrome o ubiquinol oxidase subunit III 0.70 JDDGAC_24930 clpB ATP-dependent chaperone ClpB
Rahnella sp. WP5 0.70 EX31_RS22210 cytochrome o ubiquinol oxidase subunit III 0.69 EX31_RS07560 ATP-dependent chaperone ClpB low > 89
Escherichia coli ECRC102 0.70 NIAGMN_06425 cyoC cytochrome o ubiquinol oxidase subunit III 0.70 NIAGMN_19035 clpB ATP-dependent chaperone ClpB
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.70 GFF4344 Cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-) 0.70 GFF4184 ClpB protein low > 78
Escherichia coli ECRC101 0.70 OKFHMN_08370 cyoC cytochrome o ubiquinol oxidase subunit III 0.70 OKFHMN_21265 clpB ATP-dependent chaperone ClpB
Escherichia coli ECRC99 0.70 KEDOAH_19595 cyoC cytochrome o ubiquinol oxidase subunit III 0.70 KEDOAH_06955 clpB ATP-dependent chaperone ClpB
Pseudomonas putida KT2440 0.69 PP_0814 cytochrome bo terminal oxidase subunit III 0.93 PP_0625 Chaperone protein ClpB
Serratia liquefaciens MT49 0.67 IAI46_04975 cytochrome o ubiquinol oxidase subunit III 0.69 IAI46_03995 ATP-dependent chaperone ClpB low > 86
Dickeya dadantii 3937 0.67 DDA3937_RS05605 cytochrome o ubiquinol oxidase subunit III 0.69 DDA3937_RS16100 ATP-dependent chaperone ClpB
Pectobacterium carotovorum WPP14 0.67 HER17_RS15885 cytochrome o ubiquinol oxidase subunit III 0.70 HER17_RS05410 ATP-dependent chaperone ClpB low > 75
Dickeya dianthicola ME23 0.67 DZA65_RS05975 cytochrome o ubiquinol oxidase subunit III 0.69 DZA65_RS17320 ATP-dependent chaperone ClpB low > 75
Dickeya dianthicola 67-19 0.66 HGI48_RS05650 cytochrome o ubiquinol oxidase subunit III 0.69 HGI48_RS16225 ATP-dependent chaperone ClpB low > 71
Enterobacter sp. TBS_079 0.64 MPMX20_01021 Cytochrome bo(3) ubiquinol oxidase subunit 3 0.70 MPMX20_03461 Chaperone protein ClpB low > 85
Shewanella sp. ANA-3 0.61 Shewana3_4033 cytochrome c oxidase, subunit III (RefSeq) 0.70 Shewana3_3169 ATPase (RefSeq) low > 73
Shewanella loihica PV-4 0.60 Shew_0368 cytochrome c oxidase, subunit III (RefSeq) 0.70 Shew_2948 ATPase (RefSeq) low > 60
Cupriavidus basilensis FW507-4G11 0.59 RR42_RS32590 cytochrome o ubiquinol oxidase subunit III 0.64 RR42_RS12455 protein disaggregation chaperone low > 128
Ralstonia solanacearum IBSBF1503 0.59 RALBFv3_RS06650 cytochrome o ubiquinol oxidase subunit III 0.65 RALBFv3_RS00030 ATP-dependent chaperone ClpB
Ralstonia solanacearum UW163 0.59 UW163_RS06975 cytochrome o ubiquinol oxidase subunit III 0.65 UW163_RS13360 ATP-dependent chaperone ClpB
Ralstonia solanacearum PSI07 0.59 RPSI07_RS10575 cytochrome o ubiquinol oxidase subunit III 0.64 RPSI07_RS17450 ATP-dependent chaperone ClpB
Alteromonas macleodii MIT1002 0.59 MIT1002_03927 Cytochrome o ubiquinol oxidase subunit 3 0.71 MIT1002_02677 Heat shock protein F84.1 low > 70
Ralstonia solanacearum GMI1000 0.59 RS_RS14600 cytochrome o ubiquinol oxidase subunit III 0.64 RS_RS06695 chaperone protein ClpB low > 80
Paraburkholderia graminis OAS925 0.58 ABIE53_005342 cytochrome o ubiquinol oxidase subunit 3 0.67 ABIE53_002033 ATP-dependent Clp protease ATP-binding subunit ClpB low > 113
Variovorax sp. OAS795 0.57 ABID97_RS07630 cytochrome o ubiquinol oxidase subunit III 0.64 ABID97_RS10930 ATP-dependent chaperone ClpB low > 91
Sinorhizobium meliloti 1021 0.57 SM_b21489 cytochrome O ubiquinol oxidase subunit III 0.57 SMc02433 ATP-dependent protease low > 103
Paraburkholderia sabiae LMG 24235 0.57 QEN71_RS15350 cytochrome o ubiquinol oxidase subunit III 0.68 QEN71_RS22370 ATP-dependent chaperone ClpB low > 153
Variovorax sp. SCN45 0.57 GFF5676 Cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-) 0.64 GFF2792 Chaperone protein ClpB (ATP-dependent unfoldase) low > 127
Ralstonia sp. UNC404CL21Col 0.56 ABZR87_RS02325 cytochrome o ubiquinol oxidase subunit III 0.64 ABZR87_RS11485 ATP-dependent chaperone ClpB low > 80
Paraburkholderia bryophila 376MFSha3.1 0.56 H281DRAFT_03428 cytochrome bo3 quinol oxidase subunit 3 (EC 1.10.3.-) 0.67 H281DRAFT_00817 ATP-dependent Clp protease ATP-binding subunit ClpB low > 103
Sphingomonas koreensis DSMZ 15582 0.56 Ga0059261_1564 cytochrome bo3 quinol oxidase subunit 3 (EC 1.10.3.-) 0.58 Ga0059261_1434 ATP-dependent chaperone ClpB low > 68
Rhizobium sp. OAE497 0.56 ABIE40_RS19825 cytochrome o ubiquinol oxidase subunit III 0.58 ABIE40_RS17260 ATP-dependent chaperone ClpB low > 107
Burkholderia phytofirmans PsJN 0.55 BPHYT_RS24925 cytochrome O ubiquinol oxidase 0.67 BPHYT_RS08990 protein disaggregation chaperone low > 109
Azospirillum brasilense Sp245 0.55 AZOBR_RS23170 cytochrome O ubiquinol oxidase 0.59 AZOBR_RS18950 ATPase AAA low > 97
Herbaspirillum seropedicae SmR1 0.55 HSERO_RS12310 cytochrome O ubiquinol oxidase 0.65 HSERO_RS10545 protein disaggregation chaperone
Agrobacterium fabrum C58 0.55 Atu0140 cytochrome o ubiquinol oxidase subunit III 0.57 Atu4177 ATP-dependent Clp protease, ATP-binding subunit
Bosea sp. OAE506 0.54 ABIE41_RS21030 cytochrome o ubiquinol oxidase subunit III 0.57 ABIE41_RS23785 ATP-dependent chaperone ClpB low > 77
Dyella japonica UNC79MFTsu3.2 0.54 ABZR86_RS07615 cytochrome o ubiquinol oxidase subunit III 0.70 ABZR86_RS10940 ATP-dependent chaperone ClpB low > 74
Brevundimonas sp. GW460-12-10-14-LB2 0.53 A4249_RS04455 cytochrome o ubiquinol oxidase subunit III 0.57 A4249_RS11010 ATP-dependent chaperone ClpB
Azospirillum sp. SherDot2 0.53 MPMX19_06177 Cytochrome bo(3) ubiquinol oxidase subunit 3 0.60 MPMX19_02442 Chaperone protein ClpB
Acidovorax sp. GW101-3H11 0.53 Ac3H11_3143 Cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-) 0.64 Ac3H11_1474 ClpB protein
Acinetobacter radioresistens SK82 0.53 MPMX26_01160 Cytochrome bo(3) ubiquinol oxidase subunit 3 0.66 MPMX26_01096 Chaperone protein ClpB low > 36
Xanthomonas campestris pv. campestris strain 8004 0.51 Xcc-8004.3815.1 Cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-) 0.71 Xcc-8004.1382.1 ClpB protein low > 74
Lysobacter sp. OAE881 0.51 ABIE51_RS09775 cytochrome o ubiquinol oxidase subunit III 0.72 ABIE51_RS04925 ATP-dependent chaperone ClpB low > 62
Caulobacter crescentus NA1000 0.50 CCNA_01849 quinol cytochrome oxidase polypeptide III 0.56 CCNA_00922 ClpB protein low > 66
Caulobacter crescentus NA1000 Δfur 0.50 CCNA_01849 quinol cytochrome oxidase polypeptide III 0.56 CCNA_00922 ClpB protein low > 67
Mycobacterium tuberculosis H37Rv 0.21 Rv2193 Probable cytochrome C oxidase (subunit III) CtaE 0.54 Rv0384c Probable endopeptidase ATP binding protein (chain B) ClpB (ClpB protein) (heat shock protein F84.1)

Not shown: 0 genomes with orthologs for PS417_23380 only; 33 genomes with orthologs for PS417_03830 only