Conservation of cofitness between Psest_4191 and Psest_0756 in Pseudomonas stutzeri RCH2

59 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_4191 Transcriptional regulator 1.0 Psest_0756 alkylhydroperoxidase AhpD family core domain 0.24 17
Pseudomonas fluorescens FW300-N2E2 0.90 Pf6N2E2_4353 Hydrogen peroxide-inducible genes activator 0.49 Pf6N2E2_638 4-carboxymuconolactone decarboxylase domain/alkylhydroperoxidase AhpD family core domain protein low > 103
Pseudomonas simiae WCS417 0.87 PS417_27865 LysR family transcriptional regulator 0.50 PS417_11745 alkylhydroperoxidase — —
Pseudomonas fluorescens FW300-N2C3 0.87 AO356_12385 LysR family transcriptional regulator 0.50 AO356_24725 alkylhydroperoxidase low > 104
Pseudomonas fluorescens SBW25-INTG 0.87 PFLU_RS29545 hydrogen peroxide-inducible genes activator 0.51 PFLU_RS12520 carboxymuconolactone decarboxylase family protein low > 109
Pseudomonas fluorescens SBW25 0.87 PFLU_RS29545 hydrogen peroxide-inducible genes activator 0.51 PFLU_RS12520 carboxymuconolactone decarboxylase family protein low > 109
Pseudomonas sp. RS175 0.86 PFR28_04434 Hydrogen peroxide-inducible genes activator 0.49 PFR28_01606 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N2E3 0.86 AO353_09315 LysR family transcriptional regulator 0.49 AO353_19685 alkylhydroperoxidase low > 101
Pseudomonas sp. S08-1 0.86 OH686_13510 Hydrogen peroxide-inducible genes activator 0.45 OH686_05550 4-carboxymuconolactone decarboxylase domain/alkylhydroperoxidase AhpD family core domain protein low > 80
Pseudomonas fluorescens GW456-L13 0.86 PfGW456L13_773 Hydrogen peroxide-inducible genes activator 0.48 PfGW456L13_3291 4-carboxymuconolactone decarboxylase domain/alkylhydroperoxidase AhpD family core domain protein low > 87
Pseudomonas fluorescens FW300-N1B4 0.85 Pf1N1B4_2106 Hydrogen peroxide-inducible genes activator 0.48 Pf1N1B4_4647 4-carboxymuconolactone decarboxylase domain/alkylhydroperoxidase AhpD family core domain protein — —
Dechlorosoma suillum PS 0.54 Dsui_0823 transcriptional regulator 0.40 Dsui_2082 alkylhydroperoxidase AhpD family core domain protein low > 51
Ralstonia solanacearum PSI07 0.51 RPSI07_RS11690 hydrogen peroxide-inducible genes activator 0.34 RPSI07_RS23360 carboxymuconolactone decarboxylase family protein low > 81
Paraburkholderia bryophila 376MFSha3.1 0.51 H281DRAFT_04673 transcriptional regulator, LysR family 0.49 H281DRAFT_05243 alkylhydroperoxidase AhpD family core domain-containing protein low > 103
Burkholderia phytofirmans PsJN 0.51 BPHYT_RS03470 LysR family transcriptional regulator 0.49 BPHYT_RS11125 alkylhydroperoxidase low > 109
Paraburkholderia sabiae LMG 24235 0.51 QEN71_RS26625 LysR substrate-binding domain-containing protein 0.48 QEN71_RS15910 carboxymuconolactone decarboxylase family protein low > 153
Paraburkholderia graminis OAS925 0.50 ABIE53_000834 LysR family hydrogen peroxide-inducible transcriptional activator 0.51 ABIE53_002308 AhpD family alkylhydroperoxidase low > 113
Ralstonia sp. UNC404CL21Col 0.50 ABZR87_RS01255 LysR substrate-binding domain-containing protein 0.48 ABZR87_RS04635 carboxymuconolactone decarboxylase family protein low > 80
Cupriavidus basilensis FW507-4G11 0.48 RR42_RS17385 LysR family transcriptional regulator 0.53 RR42_RS09185 alkylhydroperoxidase — —
Variovorax sp. SCN45 0.47 GFF5549 Hydrogen peroxide-inducible genes activator => OxyR 0.39 GFF5441 4-carboxymuconolactone decarboxylase domain/alkylhydroperoxidase AhpD family core domain protein low > 127
Variovorax sp. OAS795 0.46 ABID97_RS01570 LysR substrate-binding domain-containing protein 0.39 ABID97_RS02025 carboxymuconolactone decarboxylase family protein low > 91
Hydrogenophaga sp. GW460-11-11-14-LB1 0.43 GFF2803 Hydrogen peroxide-inducible genes activator 0.35 GFF236 Alkylhydroperoxidase AhpD core low > 90
Azospirillum sp. SherDot2 0.37 MPMX19_04930 Hydrogen peroxide-inducible genes activator 0.37 MPMX19_00242 hypothetical protein low > 112
Escherichia fergusonii Becca 0.37 EFB2_04651 Hydrogen peroxide-inducible genes activator 0.35 EFB2_01256 hypothetical protein low > 86
Escherichia coli ECOR38 0.37 HEPCGN_12210 oxyR DNA-binding transcriptional regulator OxyR 0.36 HEPCGN_20045 yciW alkylhydroperoxidase low > 85
Escherichia coli ECRC101 0.37 MCAODC_04065 oxyR DNA-binding transcriptional regulator OxyR 0.35 MCAODC_11370 yciW alkylhydroperoxidase — —
Escherichia coli ECRC98 0.37 JDDGAC_17190 oxyR DNA-binding transcriptional regulator OxyR 0.35 JDDGAC_24510 yciW alkylhydroperoxidase — —
Escherichia coli Nissle 1917 0.37 ECOLIN_RS22870 DNA-binding transcriptional regulator OxyR 0.36 ECOLIN_RS14905 carboxymuconolactone decarboxylase family protein low > 52
Escherichia coli ECRC99 0.37 KEDOAH_14595 oxyR DNA-binding transcriptional regulator OxyR 0.35 KEDOAH_07290 yciW alkylhydroperoxidase — —
Dickeya dadantii 3937 0.37 DDA3937_RS00970 DNA-binding transcriptional regulator OxyR 0.30 DDA3937_RS02140 carboxymuconolactone decarboxylase family protein low > 74
Escherichia coli ECRC102 0.37 NIAGMN_11315 oxyR DNA-binding transcriptional regulator OxyR 0.35 NIAGMN_18615 yciW alkylhydroperoxidase — —
Escherichia coli ECRC101 0.37 OKFHMN_13565 oxyR DNA-binding transcriptional regulator OxyR 0.35 OKFHMN_20850 yciW alkylhydroperoxidase — —
Pectobacterium carotovorum WPP14 0.36 HER17_RS00955 DNA-binding transcriptional regulator OxyR 0.42 HER17_RS12395 carboxymuconolactone decarboxylase family protein low > 75
Enterobacter sp. TBS_079 0.36 MPMX20_04519 Hydrogen peroxide-inducible genes activator 0.45 MPMX20_00613 hypothetical protein low > 85
Enterobacter asburiae PDN3 0.36 EX28DRAFT_4424 Transcriptional regulator 0.44 EX28DRAFT_3514 alkylhydroperoxidase AhpD family core domain — —
Azospirillum brasilense Sp245 0.36 AZOBR_RS31340 LysR family transcriptional regulator 0.36 AZOBR_RS16755 alkylhydroperoxidase low > 97
Klebsiella michiganensis M5al 0.36 BWI76_RS00865 DNA-binding transcriptional regulator OxyR 0.35 BWI76_RS22040 carboxymuconolactone decarboxylase family protein low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.36 GFF2347 Hydrogen peroxide-inducible genes activator 0.32 GFF1581 4-carboxymuconolactone decarboxylase domain/alkylhydroperoxidase AhpD family core domain protein low > 78
Rahnella sp. WP5 0.35 EX31_RS14170 DNA-binding transcriptional regulator OxyR 0.32 EX31_RS13560 carboxymuconolactone decarboxylase family protein low > 89
Serratia liquefaciens MT49 0.35 IAI46_24475 DNA-binding transcriptional regulator OxyR 0.36 IAI46_19890 carboxymuconolactone decarboxylase family protein low > 86
Pantoea sp. MT58 0.35 IAI47_00930 DNA-binding transcriptional regulator OxyR 0.31 IAI47_01105 carboxymuconolactone decarboxylase family protein low > 76
Rhodanobacter sp. FW510-T8 0.33 OKGIIK_01995 lysR DNA-binding transcriptional regulator OxyR 0.57 OKGIIK_03285 yciW carboxymuconolactone decarboxylase low > 52
Magnetospirillum magneticum AMB-1 0.33 AMB_RS03045 hydrogen peroxide-inducible genes activator 0.29 AMB_RS17595 carboxymuconolactone decarboxylase family protein low > 64
Sphingomonas koreensis DSMZ 15582 0.32 Ga0059261_0159 Transcriptional regulator 0.41 Ga0059261_3436 alkylhydroperoxidase AhpD family core domain low > 68
Rhodanobacter denitrificans FW104-10B01 0.31 LRK54_RS04765 LysR substrate-binding domain-containing protein 0.55 LRK54_RS14435 carboxymuconolactone decarboxylase family protein low > 59
Rhodanobacter denitrificans MT42 0.31 LRK55_RS04545 LysR substrate-binding domain-containing protein 0.55 LRK55_RS14150 carboxymuconolactone decarboxylase family protein low > 63
Lysobacter sp. OAE881 0.31 ABIE51_RS05475 LysR substrate-binding domain-containing protein 0.37 ABIE51_RS08430 carboxymuconolactone decarboxylase family protein — —
Sinorhizobium meliloti 1021 0.30 SMc00818 hydrogen peroxide-inducible genes activator (morphology and AUTO-aggregation control protein) 0.43 SM_b20029 hypothetical protein low > 103
Echinicola vietnamensis KMM 6221, DSM 17526 0.30 Echvi_1045 Transcriptional regulator 0.42 Echvi_2879 alkylhydroperoxidase AhpD family core domain low > 79
Dyella japonica UNC79MFTsu3.2 0.30 ABZR86_RS19355 DNA-binding transcriptional regulator OxyR 0.44 ABZR86_RS01600 carboxymuconolactone decarboxylase family protein low > 74
Phaeobacter inhibens DSM 17395 0.30 PGA1_78p00040 hydrogen peroxide-inducible genes activator OxyR 0.36 PGA1_c28910 carboxymuconolactone decarboxylase-like protein — —
Agrobacterium fabrum C58 0.29 Atu4641 LysR family transcriptional regulator 0.40 Atu0492 hypothetical protein low > 89
Pedobacter sp. GW460-11-11-14-LB5 0.28 CA265_RS19680 DNA-binding transcriptional regulator OxyR 0.43 CA265_RS19810 hypothetical protein low > 88
Mucilaginibacter yixingensis YX-36 DSM 26809 0.28 ABZR88_RS18535 hydrogen peroxide-inducible genes activator 0.45 ABZR88_RS10655 carboxymuconolactone decarboxylase family protein low > 71
Rhodopseudomonas palustris CGA009 0.26 TX73_002235 LysR substrate-binding domain-containing protein 0.46 TX73_005730 carboxymuconolactone decarboxylase family protein low > 86
Shewanella sp. ANA-3 0.25 Shewana3_3046 LysR family transcriptional regulator (RefSeq) 0.32 Shewana3_1929 alkylhydroperoxidase (RefSeq) 0.47 68
Alteromonas macleodii MIT1002 0.24 MIT1002_01120 Morphology and auto-aggregation control protein 0.31 MIT1002_02470 alkylhydroperoxidase AhpD family core domain protein low > 70
Shewanella amazonensis SB2B 0.24 Sama_0860 LysR family transcriptional regulator (RefSeq) 0.43 Sama_1341 alkylhydroperoxidase (RefSeq) low > 62
Rhizobium sp. OAE497 0.23 ABIE40_RS15045 hydrogen peroxide-inducible genes activator 0.45 ABIE40_RS15165 carboxymuconolactone decarboxylase family protein low > 107
Shewanella loihica PV-4 0.23 Shew_1035 LysR family transcriptional regulator (RefSeq) 0.36 Shew_2738 alkylhydroperoxidase (RefSeq) low > 60

Not shown: 35 genomes with orthologs for Psest_4191 only; 0 genomes with orthologs for Psest_0756 only