Conservation of cofitness between GFF5087 and GFF683 in Sphingobium sp. HT1-2

60 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sphingobium sp. HT1-2 1.0 GFF5087 Zinc-type alcohol dehydrogenase-like protein 1.0 GFF683 Fumarate hydratase class I, aerobic (EC 4.2.1.2) 0.86 8
Rhizobium sp. OAE497 0.66 ABIE40_RS05835 zinc-binding alcohol dehydrogenase family protein 0.18 ABIE40_RS10550 fumarate hydratase low > 107
Acinetobacter baumannii LAC-4 0.62 RR41_RS16800 zinc-binding alcohol dehydrogenase family protein 0.70 RR41_RS16545 fumarate hydratase low > 55
Azospirillum brasilense Sp245 0.61 AZOBR_RS06765 NADPH:quinone reductase 0.19 AZOBR_RS10315 fumarate hydratase
Hydrogenophaga sp. GW460-11-11-14-LB1 0.60 GFF2160 Bifunctional protein: zinc-containing alcohol dehydrogenase; quinone oxidoreductase ( NADPH:quinone reductase) (EC 1.1.1.-); Similar to arginate lyase 0.69 GFF4099 Fumarate hydratase class I, aerobic (EC 4.2.1.2)
Acinetobacter radioresistens SK82 0.58 MPMX26_00857 Zinc-type alcohol dehydrogenase-like protein 0.70 MPMX26_00411 Fumarate hydratase class I, aerobic low > 36
Pseudomonas segetis P6 0.58 MPMX49_01119 Zinc-type alcohol dehydrogenase-like protein 0.68 MPMX49_03729 Fumarate hydratase class I, anaerobic
Bosea sp. OAE506 0.57 ABIE41_RS23570 zinc-binding alcohol dehydrogenase family protein 0.17 ABIE41_RS00110 fumarate hydratase low > 77
Acidovorax sp. GW101-3H11 0.57 Ac3H11_4512 Bifunctional protein: zinc-containing alcohol dehydrogenase; quinone oxidoreductase ( NADPH:quinone reductase) (EC 1.1.1.-); Similar to arginate lyase 0.68 Ac3H11_941 Fumarate hydratase class I, aerobic (EC 4.2.1.2)
Ralstonia sp. UNC404CL21Col 0.56 ABZR87_RS05920 zinc-binding alcohol dehydrogenase family protein 0.74 ABZR87_RS14375 fumarate hydratase low > 80
Pseudomonas putida KT2440 0.56 PP_2953 Alcohol dehydrogenase, zinc-containing 0.70 PP_0897 Fumarate hydratase, class I
Pseudomonas fluorescens FW300-N2C3 0.56 AO356_26600 NADPH:quinone reductase 0.71 AO356_17810 fumarate hydratase
Pseudomonas fluorescens FW300-N1B4 0.56 Pf1N1B4_1257 Bifunctional protein: zinc-containing alcohol dehydrogenase; quinone oxidoreductase ( NADPH:quinone reductase) (EC 1.1.1.-); Similar to arginate lyase 0.71 Pf1N1B4_683 Fumarate hydratase class I, aerobic (EC 4.2.1.2) low > 87
Pseudomonas fluorescens FW300-N2E3 0.55 AO353_06135 NADPH:quinone reductase 0.72 AO353_03795 fumarate hydratase low > 101
Pseudomonas syringae pv. syringae B728a 0.55 Psyr_0658 Zinc-containing alcohol dehydrogenase superfamily 0.71 Psyr_4031 fumarase
Pseudomonas syringae pv. syringae B728a ΔmexB 0.55 Psyr_0658 Zinc-containing alcohol dehydrogenase superfamily 0.71 Psyr_4031 fumarase
Pseudomonas sp. SVBP6 0.55 COO64_RS26360 zinc-binding alcohol dehydrogenase family protein 0.71 COO64_RS12175 fumarate hydratase
Azospirillum sp. SherDot2 0.55 MPMX19_00223 Zinc-type alcohol dehydrogenase-like protein 0.18 MPMX19_03166 Fumarate hydratase class I, aerobic
Pseudomonas sp. DMC3 0.55 GFF3361 Zinc-type alcohol dehydrogenase-like protein 0.71 GFF5036 Fumarate hydratase class I, aerobic
Pseudomonas sp. S08-1 0.55 OH686_07350 Zinc-type alcohol dehydrogenase-like protein 0.71 OH686_18780 Fumarate hydratase class I, aerobic
Pseudomonas aeruginosa PA14 0.55 IKLFDK_18210 zinc-binding alcohol dehydrogenase family protein 0.72 IKLFDK_02440 fumarate hydratase
Pseudomonas sp. RS175 0.55 PFR28_05249 Zinc-type alcohol dehydrogenase-like protein 0.71 PFR28_03458 Fumarate hydratase class I, aerobic
Rhodopseudomonas palustris CGA009 0.55 TX73_016670 zinc-binding alcohol dehydrogenase family protein 0.20 TX73_020085 fumarate hydratase low > 86
Burkholderia phytofirmans PsJN 0.55 BPHYT_RS27480 NADPH:quinone reductase 0.72 BPHYT_RS06985 fumarate hydratase
Pseudomonas fluorescens FW300-N2E2 0.54 Pf6N2E2_3482 Bifunctional protein: zinc-containing alcohol dehydrogenase; quinone oxidoreductase ( NADPH:quinone reductase) (EC 1.1.1.-); Similar to arginate lyase 0.71 Pf6N2E2_5489 Fumarate hydratase class I, aerobic (EC 4.2.1.2)
Pseudomonas fluorescens GW456-L13 0.54 PfGW456L13_19 Bifunctional protein: zinc-containing alcohol dehydrogenase; quinone oxidoreductase ( NADPH:quinone reductase) (EC 1.1.1.-); Similar to arginate lyase 0.72 PfGW456L13_1808 Fumarate hydratase class I, aerobic (EC 4.2.1.2)
Variovorax sp. SCN45 0.54 GFF6904 Zinc-type alcohol dehydrogenase-like protein 0.69 GFF483 Fumarate hydratase class I, aerobic (EC 4.2.1.2) low > 127
Pseudomonas sp. BP01 0.54 JOY50_RS03260 zinc-binding alcohol dehydrogenase family protein 0.70 JOY50_RS14310 fumarate hydratase
Herbaspirillum seropedicae SmR1 0.54 HSERO_RS05430 NADPH:quinone reductase 0.73 HSERO_RS07760 fumarate hydratase
Xanthomonas campestris pv. campestris strain 8004 0.54 Xcc-8004.5377.1 DNA recombination protein RmuC 0.70 Xcc-8004.3506.1 Fumarate hydratase class I, aerobic (EC 4.2.1.2)
Pseudomonas simiae WCS417 0.53 PS417_03185 NADPH:quinone reductase 0.72 PS417_22635 fumarate hydratase
Klebsiella pneumoniae MKP103 0.53 KDGMDA_08245 zinc-binding alcohol dehydrogenase family protein 0.18 KDGMDA_20935 class I fumarate hydratase FumA low > 95
Pseudomonas fluorescens SBW25-INTG 0.53 PFLU_RS03265 zinc-binding alcohol dehydrogenase family protein 0.72 PFLU_RS24270 fumarate hydratase
Pseudomonas fluorescens SBW25 0.53 PFLU_RS03265 zinc-binding alcohol dehydrogenase family protein 0.72 PFLU_RS24270 fumarate hydratase
Paraburkholderia bryophila 376MFSha3.1 0.53 H281DRAFT_01721 zinc-binding alcohol dehydrogenase family protein 0.73 H281DRAFT_04956 fumarase, class I, homodimeric
Pseudomonas lactucae CFBP13502 0.53 GEMAOFIL_00852 Zinc-type alcohol dehydrogenase-like protein 0.70 GEMAOFIL_04680 Fumarate hydratase class I, aerobic low > 93
Pseudomonas stutzeri RCH2 0.53 Psest_3828 zinc-binding alcohol dehydrogenase family protein 0.71 Psest_3193 hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region/hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region
Rhodospirillum rubrum S1H 0.53 Rru_A0088 Zinc-containing alcohol dehydrogenase superfamily (NCBI) 0.19 Rru_A2206 tartrate dehydrogenase (NCBI)
Alteromonas macleodii MIT1002 0.52 MIT1002_02514 Zinc-type alcohol dehydrogenase-like protein 0.67 MIT1002_02009 Fumarate hydratase class I, anaerobic
Dyella japonica UNC79MFTsu3.2 0.52 ABZR86_RS18125 zinc-binding alcohol dehydrogenase family protein 0.71 ABZR86_RS19555 fumarate hydratase low > 74
Shewanella oneidensis MR-1 0.52 SO0401 alcohol dehydrogenase, zinc-containing (NCBI ptt file) 0.65 SO2222 fumarate hydratase, class I, anaerobic, putative (NCBI ptt file)
Shewanella sp. ANA-3 0.51 Shewana3_0406 alcohol dehydrogenase (RefSeq) 0.65 Shewana3_2302 fumarase (RefSeq)
Rhodanobacter sp000427505 FW510-R12 0.51 LRK53_RS01755 zinc-binding alcohol dehydrogenase family protein 0.71 LRK53_RS15950 fumarate hydratase low > 59
Variovorax sp. OAS795 0.51 ABID97_RS05565 zinc-binding alcohol dehydrogenase family protein 0.69 ABID97_RS17550 fumarate hydratase low > 91
Klebsiella michiganensis M5al 0.51 BWI76_RS27625 NADPH:quinone reductase 0.17 BWI76_RS16115 fumarate hydratase low > 92
Paraburkholderia graminis OAS925 0.51 ABIE53_005668 NADPH2:quinone reductase 0.73 ABIE53_001662 fumarate hydratase class I low > 113
Rhodanobacter sp. FW510-T8 0.51 OKGIIK_16975 qor zinc-binding alcohol dehydrogenase family protein 0.70 OKGIIK_02115 ttdA fumarate hydratase low > 53
Cupriavidus basilensis FW507-4G11 0.51 RR42_RS34125 NADPH:quinone reductase 0.75 RR42_RS13905 fumarate hydratase low > 128
Rhodanobacter denitrificans MT42 0.50 LRK55_RS06410 zinc-binding alcohol dehydrogenase family protein 0.71 LRK55_RS12360 fumarate hydratase low > 63
Rhodanobacter denitrificans FW104-10B01 0.50 LRK54_RS06665 zinc-binding alcohol dehydrogenase family protein 0.71 LRK54_RS12620 fumarate hydratase low > 59
Lysobacter sp. OAE881 0.49 ABIE51_RS06075 zinc-binding alcohol dehydrogenase family protein 0.72 ABIE51_RS12620 fumarate hydratase low > 62
Paraburkholderia sabiae LMG 24235 0.49 QEN71_RS22130 zinc-binding alcohol dehydrogenase family protein 0.72 QEN71_RS23780 fumarate hydratase low > 153
Rahnella sp. WP5 0.42 EX31_RS04010 zinc-binding alcohol dehydrogenase family protein 0.18 EX31_RS01160 fumarate hydratase low > 89
Pantoea agglomerans CFBP13505 P0401 0.42 PagCFBP13505_RS21765 zinc-binding alcohol dehydrogenase family protein 0.18 PagCFBP13505_RS13945 fumarate hydratase low > 74
Pantoea sp. MT58 0.42 IAI47_16335 zinc-binding alcohol dehydrogenase family protein 0.17 IAI47_20435 fumarate hydratase low > 76
Erwinia amylovora T8 0.41 OLJFJH_01565 zinc-binding alcohol dehydrogenase family protein 0.18 OLJFJH_15150 class I fumarate hydratase FumA low > 58
Serratia liquefaciens MT49 0.41 IAI46_02955 zinc-binding alcohol dehydrogenase family protein 0.18 IAI46_21370 fumarate hydratase low > 86
Enterobacter sp. TBS_079 0.40 MPMX20_00696 Zinc-type alcohol dehydrogenase-like protein 0.18 MPMX20_02021 Fumarate hydratase class I, aerobic low > 85
Dickeya dadantii 3937 0.39 DDA3937_RS18475 zinc-binding alcohol dehydrogenase family protein 0.17 DDA3937_RS04540 fumarate hydratase low > 74
Enterobacter asburiae PDN3 0.39 EX28DRAFT_3599 zinc-binding alcohol dehydrogenase family protein 0.18 EX28DRAFT_1609 hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region/hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region low > 76
Pectobacterium carotovorum WPP14 0.37 HER17_RS02730 zinc-binding alcohol dehydrogenase family protein 0.17 HER17_RS17120 fumarate hydratase low > 75

Not shown: 5 genomes with orthologs for GFF5087 only; 38 genomes with orthologs for GFF683 only