Conservation of cofitness between PS417_18575 and PS417_23805 in Pseudomonas simiae WCS417

64 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_18575 aspartate-semialdehyde dehydrogenase 1.0 PS417_23805 acetolactate synthase 3 regulatory subunit 0.20 20
Pseudomonas fluorescens SBW25 0.94 PFLU_RS20555 aspartate-semialdehyde dehydrogenase 1.00 PFLU_RS25645 acetolactate synthase small subunit low > 109
Pseudomonas fluorescens SBW25-INTG 0.94 PFLU_RS20555 aspartate-semialdehyde dehydrogenase 1.00 PFLU_RS25645 acetolactate synthase small subunit low > 109
Pseudomonas fluorescens FW300-N2E2 0.81 Pf6N2E2_68 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) 1.00 Pf6N2E2_5176 Acetolactate synthase small subunit (EC 2.2.1.6) low > 103
Pseudomonas sp. RS175 0.81 PFR28_02819 USG-1 protein 1.00 PFR28_03698 Acetolactate synthase isozyme 3 small subunit low > 88
Pseudomonas fluorescens FW300-N2C3 0.80 AO356_21425 aspartate-semialdehyde dehydrogenase 1.00 AO356_16175 acetolactate synthase 3 regulatory subunit low > 104
Pseudomonas fluorescens GW456-L13 0.80 PfGW456L13_3943 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) 1.00 PfGW456L13_1539 Acetolactate synthase small subunit (EC 2.2.1.6) low > 87
Pseudomonas fluorescens FW300-N2E3 0.80 AO353_20645 aspartate-semialdehyde dehydrogenase 1.00 AO353_14500 acetolactate synthase 3 regulatory subunit low > 101
Pseudomonas fluorescens FW300-N1B4 0.79 Pf1N1B4_10 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) 1.00 Pf1N1B4_2879 Acetolactate synthase small subunit (EC 2.2.1.6) low > 87
Pseudomonas syringae pv. syringae B728a 0.67 Psyr_1660 Aspartate-semialdehyde dehydrogenase 0.98 Psyr_0847 acetolactate synthase, small subunit low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.67 Psyr_1660 Aspartate-semialdehyde dehydrogenase 0.98 Psyr_0847 acetolactate synthase, small subunit low > 86
Pseudomonas putida KT2440 0.66 PP_1992 aspartate-semialdehyde dehydrogenase 0.98 PP_4679 acetohydroxybutanoate synthase / acetolactate synthase low > 96
Pseudomonas sp. S08-1 0.58 OH686_04460 Aspartate-semialdehyde dehydrogenase 0.97 OH686_08125 acetolactate synthase, small subunit low > 80
Pseudomonas stutzeri RCH2 0.48 Psest_2587 Aspartate-semialdehyde dehydrogenase 0.95 Psest_1037 acetolactate synthase, small subunit low > 67
Alteromonas macleodii MIT1002 0.41 MIT1002_02531 Aspartate-semialdehyde dehydrogenase 2 0.64 MIT1002_00504 Acetolactate synthase isozyme 3 small subunit low > 70
Shewanella amazonensis SB2B 0.40 Sama_2152 aspartate-semialdehyde dehydrogenase (RefSeq) 0.65 Sama_2019 ilvH acetolactate synthase 3 regulatory subunit (RefSeq)
Shewanella loihica PV-4 0.40 Shew_2308 aspartate-semialdehyde dehydrogenase (RefSeq) 0.67 Shew_1775 acetolactate synthase 3 regulatory subunit (RefSeq)
Vibrio cholerae E7946 ATCC 55056 0.39 CSW01_10520 Aspartate-semialdehyde dehydrogenase 2 0.68 CSW01_12560 acetolactate synthase small subunit low > 62
Shewanella oneidensis MR-1 0.39 SO3070 asd aspartate semialdehyde dehydrogenese (NCBI ptt file) 0.65 SO2278 ilvH acetolactate synthase III, small subunit (NCBI ptt file)
Shewanella sp. ANA-3 0.39 Shewana3_1477 aspartate semialdehyde dehydrogenase (RefSeq) 0.66 Shewana3_2270 ilvH acetolactate synthase 3 regulatory subunit (RefSeq)
Klebsiella michiganensis M5al 0.34 BWI76_RS20385 aspartate-semialdehyde dehydrogenase 0.68 BWI76_RS04700 acetolactate synthase small subunit low > 92
Serratia liquefaciens MT49 0.34 IAI46_17845 aspartate-semialdehyde dehydrogenase 0.68 IAI46_03380 acetolactate synthase small subunit low > 86
Enterobacter sp. TBS_079 0.34 MPMX20_03254 USG-1 protein 0.67 MPMX20_00772 Acetolactate synthase isozyme 3 small subunit low > 85
Escherichia coli ECOR27 0.34 NOLOHH_14300 usg aspartate-semialdehyde dehydrogenase 0.68 NOLOHH_03040 ilvN acetolactate synthase small subunit
Escherichia coli ECRC99 0.34 KEDOAH_05530 usg aspartate-semialdehyde dehydrogenase 0.68 KEDOAH_17460 ilvN acetolactate synthase small subunit
Escherichia coli BW25113 0.34 b2319 usg hypothetical protein (NCBI) 0.67 b0078 ilvH acetolactate synthase small subunit (NCBI) low > 76
Escherichia coli BL21 0.34 ECD_02244 putative semialdehyde dehydrogenase 0.67 ECD_00080 acetolactate synthase 3, small subunit, valine-sensitive low > 60
Dickeya dadantii 3937 0.34 DDA3937_RS14470 aspartate-semialdehyde dehydrogenase 0.67 DDA3937_RS18100 acetolactate synthase small subunit low > 74
Escherichia coli ECRC62 0.34 BNILDI_13220 usg aspartate-semialdehyde dehydrogenase 0.68 BNILDI_08570 ilvN acetolactate synthase small subunit
Escherichia coli Nissle 1917 0.34 ECOLIN_RS13440 aspartate-semialdehyde dehydrogenase 0.68 ECOLIN_RS00420 acetolactate synthase small subunit low > 52
Escherichia coli ECOR38 0.34 HEPCGN_21870 usg aspartate-semialdehyde dehydrogenase 0.67 HEPCGN_08675 ilvN acetolactate synthase small subunit low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.34 OHPLBJKB_01386 USG-1 protein 0.68 OHPLBJKB_03580 Acetolactate synthase isozyme 3 small subunit low > 73
Escherichia fergusonii Becca 0.34 EFB2_01539 USG-1 protein 0.68 EFB2_03968 Acetolactate synthase isozyme 3 small subunit low > 86
Desulfovibrio vulgaris Hildenborough JW710 0.33 DVU3048 asd aspartate-semialdehyde dehydrogenase (TIGR) 0.45 DVU1377 ilvN-2 acetolactate synthase, small subunit (TIGR)
Escherichia coli ECRC101 0.33 OKFHMN_22665 usg aspartate-semialdehyde dehydrogenase 0.68 OKFHMN_10695 ilvN acetolactate synthase small subunit
Escherichia coli ECRC102 0.33 NIAGMN_20440 usg aspartate-semialdehyde dehydrogenase 0.68 NIAGMN_08545 ilvN acetolactate synthase small subunit
Escherichia coli ECRC101 0.33 MCAODC_13705 usg aspartate-semialdehyde dehydrogenase 0.68 MCAODC_01210 ilvN acetolactate synthase small subunit
Escherichia coli ECRC98 0.33 JDDGAC_26625 usg aspartate-semialdehyde dehydrogenase 0.68 JDDGAC_14290 ilvN acetolactate synthase small subunit
Desulfovibrio vulgaris Miyazaki F 0.33 DvMF_2382 aspartate-semialdehyde dehydrogenase (RefSeq) 0.46 DvMF_0154 ilvH acetolactate synthase 3 regulatory subunit (RefSeq)
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.33 GFF1935 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) 0.67 GFF160 Acetolactate synthase small subunit (EC 2.2.1.6) low > 78
Agrobacterium fabrum C58 0.33 Atu2490 aspartate-semialdehyde dehydrogenase 0.40 Atu2035 acetolactate synthase, small subunit
Dickeya dianthicola ME23 0.33 DZA65_RS15375 aspartate-semialdehyde dehydrogenase 0.67 DZA65_RS19180 acetolactate synthase small subunit low > 75
Dickeya dianthicola 67-19 0.33 HGI48_RS14440 aspartate-semialdehyde dehydrogenase 0.67 HGI48_RS18035 acetolactate synthase small subunit
Rahnella sp. WP5 0.33 EX31_RS19605 aspartate-semialdehyde dehydrogenase 0.69 EX31_RS03660 acetolactate synthase small subunit low > 89
Sinorhizobium meliloti 1021 0.32 SMc04410 aspartate-semialdehyde dehydrogenase 0.40 SMc01430 acetolactate synthase 3 regulatory subunit
Pectobacterium carotovorum WPP14 0.32 HER17_RS06985 aspartate-semialdehyde dehydrogenase 0.69 HER17_RS03100 acetolactate synthase small subunit low > 75
Dinoroseobacter shibae DFL-12 0.32 Dshi_3240 aspartate-semialdehyde dehydrogenase (RefSeq) 0.37 Dshi_1781 acetolactate synthase, small subunit (RefSeq)
Erwinia tracheiphila SCR3 0.31 LU632_RS07820 aspartate-semialdehyde dehydrogenase 0.66 LU632_RS02890 ilvN acetolactate synthase small subunit low > 74
Sphingomonas koreensis DSMZ 15582 0.31 Ga0059261_4003 aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) 0.45 Ga0059261_0067 acetolactate synthase, small subunit (EC 2.2.1.6)
Bosea sp. OAE506 0.31 ABIE41_RS08445 aspartate-semialdehyde dehydrogenase 0.38 ABIE41_RS12905 acetolactate synthase small subunit
Enterobacter asburiae PDN3 0.31 EX28DRAFT_0285 Aspartate-semialdehyde dehydrogenase 0.66 EX28DRAFT_3674 acetolactate synthase, small subunit (EC 2.2.1.6) low > 76
Rhodopseudomonas palustris CGA009 0.31 TX73_001190 aspartate-semialdehyde dehydrogenase 0.41 TX73_010470 acetolactate synthase small subunit
Pantoea sp. MT58 0.31 IAI47_06240 aspartate-semialdehyde dehydrogenase 0.66 IAI47_15985 acetolactate synthase small subunit low > 76
Rhizobium sp. OAE497 0.31 ABIE40_RS19095 aspartate-semialdehyde dehydrogenase 0.39 ABIE40_RS11490 acetolactate synthase small subunit
Magnetospirillum magneticum AMB-1 0.30 AMB_RS03035 aspartate-semialdehyde dehydrogenase 0.42 AMB_RS17745 acetolactate synthase small subunit
Caulobacter crescentus NA1000 0.30 CCNA_00253 aspartate-semialdehyde dehydrogenase 0.37 CCNA_02186 acetolactate synthase small subunit low > 66
Caulobacter crescentus NA1000 Δfur 0.30 CCNA_00253 aspartate-semialdehyde dehydrogenase 0.37 CCNA_02186 acetolactate synthase small subunit low > 67
Phaeobacter inhibens DSM 17395 0.30 PGA1_c31480 aspartate-semialdehyde dehydrogenase Asd 0.41 PGA1_c20220 acetolactate synthase isozyme 3 small subunit
Azospirillum sp. SherDot2 0.30 MPMX19_02000 Aspartate-semialdehyde dehydrogenase 2 0.41 MPMX19_01775 Acetolactate synthase isozyme 3 small subunit
Rhodospirillum rubrum S1H 0.29 Rru_A1196 Aspartate-semialdehyde dehydrogenase, USG-1 related (NCBI) 0.42 Rru_A0468 Acetolactate synthase, small subunit (NCBI)
Parabacteroides merdae CL09T00C40 0.28 HMPREF1078_RS05255 aspartate-semialdehyde dehydrogenase 0.17 HMPREF1078_RS16685 acetolactate synthase small subunit
Synechococcus elongatus PCC 7942 0.27 Synpcc7942_1848 asd aspartate-semialdehyde dehydrogenase 0.40 Synpcc7942_2434 ilvH acetolactate synthase 3 regulatory subunit
Azospirillum brasilense Sp245 0.27 AZOBR_RS13975 aspartate-semialdehyde dehydrogenase 0.42 AZOBR_RS06565 acetolactate synthase low > 97
Echinicola vietnamensis KMM 6221, DSM 17526 0.26 Echvi_0713 aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) 0.20 Echvi_2057 acetohydroxybutanoate synthase regulatory subunit (EC 2.2.1.6) (from data)
Mycobacterium tuberculosis H37Rv 0.24 Rv3708c Aspartate-semialdehyde dehydrogenase Asd (ASA dehydrogenase) (ASADH) (aspartic semialdehyde dehydrogenase) (L-aspartate-beta-semialdehyde dehydrogenase) 0.39 Rv3002c Probable acetolactate synthase (small subunit) IlvN (acetohydroxy-acid synthase) (AHAS) (ALS)

Not shown: 16 genomes with orthologs for PS417_18575 only; 22 genomes with orthologs for PS417_23805 only