Conservation of cofitness between PS417_18115 and PS417_23160 in Pseudomonas simiae WCS417

46 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_18115 gamma-glutamyltransferase 1.0 PS417_23160 50S rRNA methyltransferase 0.21 4
Pseudomonas fluorescens SBW25 0.94 PFLU_RS20020 gamma-glutamyltransferase family protein 0.98 PFLU_RS24815 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN low > 109
Pseudomonas fluorescens SBW25-INTG 0.94 PFLU_RS20020 gamma-glutamyltransferase family protein 0.98 PFLU_RS24815 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN low > 109
Pseudomonas fluorescens FW300-N2C3 0.92 AO356_28620 gamma-glutamyltransferase 0.94 AO356_06605 23S rRNA (adenine(2503)-C2)-methyltransferase low > 104
Pseudomonas sp. RS175 0.92 PFR28_01918 Glutathione hydrolase-like YwrD proenzyme 0.94 PFR28_00294 Dual-specificity RNA methyltransferase RlmN low > 88
Pseudomonas fluorescens FW300-N2E3 0.84 AO353_25280 gamma-glutamyltransferase 0.95 AO353_15875 23S rRNA (adenine(2503)-C2)-methyltransferase low > 101
Pantoea sp. MT58 0.43 IAI47_18690 gamma-glutamyltransferase family protein 0.55 IAI47_05040 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN low > 76
Enterobacter asburiae PDN3 0.43 EX28DRAFT_2670 Gamma-glutamyltransferase 0.55 EX28DRAFT_0126 23S rRNA (adenine(2503)-C(2))-methyltransferase low > 76
Enterobacter sp. TBS_079 0.42 MPMX20_00908 Glutathione hydrolase-like YwrD proenzyme 0.55 MPMX20_03395 Dual-specificity RNA methyltransferase RlmN low > 85
Pseudomonas syringae pv. syringae B728a 0.41 Psyr_2681 gamma-glutamyltransferase 2, Threonine peptidase, MEROPS family T03 0.94 Psyr_1245 23S rRNA m(2)A-2503 methyltransferase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.41 Psyr_2681 gamma-glutamyltransferase 2, Threonine peptidase, MEROPS family T03 0.94 Psyr_1245 23S rRNA m(2)A-2503 methyltransferase low > 86
Cupriavidus basilensis FW507-4G11 0.41 RR42_RS15195 gamma-glutamyltransferase 0.55 RR42_RS13155 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN — —
Ralstonia solanacearum PSI07 0.40 RPSI07_RS12370 gamma-glutamyltransferase family protein 0.54 RPSI07_RS18115 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN low > 81
Burkholderia phytofirmans PsJN 0.40 BPHYT_RS16465 gamma-glutamyltransferase 0.52 BPHYT_RS12590 dual-specificity RNA methyltransferase RlmN low > 109
Ralstonia sp. UNC404CL21Col 0.40 ABZR87_RS00525 gamma-glutamyltransferase family protein 0.55 ABZR87_RS10900 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN low > 80
Rahnella sp. WP5 0.40 EX31_RS09195 gamma-glutamyltransferase family protein 0.56 EX31_RS20525 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN low > 89
Paraburkholderia graminis OAS925 0.39 ABIE53_006345 gamma-glutamyltranspeptidase/glutathione hydrolase 0.52 ABIE53_002744 23S rRNA (adenine2503-C2)-methyltransferase low > 113
Paraburkholderia sabiae LMG 24235 0.39 QEN71_RS31500 gamma-glutamyltransferase family protein 0.53 QEN71_RS05965 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN low > 153
Kangiella aquimarina DSM 16071 0.39 B158DRAFT_1387 gamma-glutamyltranspeptidase 0.58 B158DRAFT_1149 23S rRNA m2A2503 methyltransferase low > 40
Acidovorax sp. GW101-3H11 0.39 Ac3H11_776 Gamma-glutamyltranspeptidase (EC 2.3.2.2) 0.52 Ac3H11_1791 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) low > 79
Paraburkholderia bryophila 376MFSha3.1 0.39 H281DRAFT_01027 gamma-glutamyltranspeptidase / glutathione hydrolase 0.52 H281DRAFT_00514 23S rRNA m(2)A-2503 methyltransferase — —
Ralstonia solanacearum GMI1000 0.38 RS_RS12540 gamma-glutamyltransferase family protein 0.54 RS_RS06070 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN low > 80
Ralstonia solanacearum IBSBF1503 0.38 RALBFv3_RS04910 gamma-glutamyltransferase family protein 0.54 RALBFv3_RS15260 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN — —
Ralstonia solanacearum UW163 0.38 UW163_RS08715 gamma-glutamyltransferase family protein 0.54 UW163_RS12725 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN — —
Variovorax sp. OAS795 0.38 ABID97_RS22680 gamma-glutamyltransferase family protein 0.48 ABID97_RS14210 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN low > 91
Hydrogenophaga sp. GW460-11-11-14-LB1 0.38 GFF5191 Gamma-glutamyltranspeptidase (EC 2.3.2.2) 0.48 GFF4866 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) low > 90
Shewanella amazonensis SB2B 0.38 Sama_0669 gamma-glutamyltransferase (RefSeq) 0.53 Sama_2368 hypothetical protein (RefSeq) low > 62
Xanthomonas campestris pv. campestris strain 8004 0.38 Xcc-8004.1061.1 Gamma-glutamyltranspeptidase (EC 2.3.2.2) 0.53 Xcc-8004.2737.1 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) low > 74
Alteromonas macleodii MIT1002 0.38 MIT1002_00419 Putative gamma-glutamyltransferase YwrD 0.51 MIT1002_02791 Dual-specificity RNA methyltransferase RlmN low > 70
Variovorax sp. SCN45 0.37 GFF6070 Gamma-glutamyltranspeptidase (EC 2.3.2.2) @ Glutathione hydrolase (EC 3.4.19.13) 0.48 GFF992 23S rRNA (adenine(2503)-C(2))-methyltransferase @ tRNA (adenine(37)-C(2))-methyltransferase (EC 2.1.1.192) 0.57 117
Shewanella oneidensis MR-1 0.37 SO0741 ggt-1 gamma-glutamyltranspeptidase (NCBI ptt file) 0.54 SO3315 conserved hypothetical protein TIGR00048 (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.37 Shewana3_3514 gamma-glutamyltransferase 2 (RefSeq) 0.54 Shewana3_1226 hypothetical protein (RefSeq) low > 73
Dinoroseobacter shibae DFL-12 0.35 Dshi_4194 Gamma-glutamyltransferase (RefSeq) 0.42 Dshi_3311 radical SAM enzyme, Cfr family (RefSeq) — —
Lysobacter sp. OAE881 0.35 ABIE51_RS01560 gamma-glutamyltransferase 0.54 ABIE51_RS09415 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN low > 62
Synechococcus elongatus PCC 7942 0.32 Synpcc7942_B2624 gamma-glutamyltransferase 2. Threonine peptidase. MEROPS family T03 0.32 Synpcc7942_1758 hypothetical protein low > 38
Bosea sp. OAE506 0.29 ABIE41_RS03255 gamma-glutamyltransferase 0.41 ABIE41_RS04880 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN low > 77
Rhodopseudomonas palustris CGA009 0.28 TX73_012055 gamma-glutamyltransferase 0.42 TX73_002060 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN low > 86
Azospirillum sp. SherDot2 0.27 MPMX19_03702 Glutathione hydrolase-like YwrD proenzyme 0.44 MPMX19_02413 Dual-specificity RNA methyltransferase RlmN low > 112
Phaeobacter inhibens DSM 17395 0.27 PGA1_c33210 putative gamma-glutamyltransferase 0.42 PGA1_c36240 ribosomal RNA large subunit methyltransferase N low > 62
Azospirillum brasilense Sp245 0.26 AZOBR_RS31700 gamma-glutamyltransferase 0.44 AZOBR_RS00800 50S rRNA methyltransferase low > 97
Magnetospirillum magneticum AMB-1 0.23 AMB_RS21795 gamma-glutamyltransferase family protein 0.42 AMB_RS05715 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN low > 64
Klebsiella michiganensis M5al 0.22 BWI76_RS10560 gamma-glutamyltransferase 0.55 BWI76_RS21095 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN low > 92
Dechlorosoma suillum PS 0.22 Dsui_0417 gamma-glutamyltransferase 0.53 Dsui_3145 23S rRNA m2A2503 methyltransferase — —
Herbaspirillum seropedicae SmR1 0.21 HSERO_RS18885 gamma-glutamyltransferase 0.53 HSERO_RS14810 50S rRNA methyltransferase — —
Rhizobium sp. OAE497 0.21 ABIE40_RS23150 gamma-glutamyltransferase family protein 0.41 ABIE40_RS18200 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN low > 107
Desulfovibrio vulgaris Miyazaki F 0.20 DvMF_3118 Gamma-glutamyltransferase (RefSeq) 0.33 DvMF_1431 radical SAM enzyme, Cfr family (RefSeq) low > 51
Vibrio cholerae E7946 ATCC 55056 0.16 CSW01_17015 gamma-glutamyltransferase family protein 0.54 CSW01_03930 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN low > 62

Not shown: 2 genomes with orthologs for PS417_18115 only; 53 genomes with orthologs for PS417_23160 only