| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Marinobacter adhaerens HP15 | 1.0 | HP15_3355 | | multi-sensor signal transduction histidine kinase | 1.0 | HP15_425 | | two-component response regulator NtrC | 0.58 | 9 |
| Pseudomonas syringae pv. syringae B728a | 0.48 | Psyr_5033 | | PAS/PAC sensor signal transduction histidine kinase | 0.74 | Psyr_4822 | | Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.48 | Psyr_5033 | | PAS/PAC sensor signal transduction histidine kinase | 0.74 | Psyr_4822 | | Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) | — | — |
| Pseudomonas simiae WCS417 | 0.47 | PS417_28040 | | histidine kinase | 0.75 | PS417_01635 | | nitrogen regulation protein NR(I) | low | > 88 |
| Pseudomonas putida KT2440 | 0.47 | PP_5321 | | two-component system sensory histidine kinase | 0.74 | PP_5048 | | two-component system DNA-binding transcriptional dual regulator GlnL/GlnG | low | > 96 |
| Pseudomonas fluorescens SBW25-INTG | 0.47 | PFLU_RS29730 | | phosphate regulon sensor histidine kinase PhoR | 0.75 | PFLU_RS01685 | | nitrogen regulation protein NR(I) | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.47 | PFLU_RS29730 | | phosphate regulon sensor histidine kinase PhoR | 0.75 | PFLU_RS01685 | | nitrogen regulation protein NR(I) | low | > 109 |
| Pseudomonas fluorescens FW300-N2C3 | 0.47 | AO356_11005 | | histidine kinase | 0.74 | AO356_09730 | | nitrogen regulation protein NR(I) | low | > 104 |
| Pseudomonas fluorescens FW300-N2E2 | 0.47 | Pf6N2E2_4067 | | Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3) | 0.75 | Pf6N2E2_3826 | | Nitrogen regulation protein NR(I) | low | > 103 |
| Pseudomonas sp. S08-1 | 0.46 | OH686_13460 | | phosphate regulon sensor kinase PhoR | 0.75 | OH686_10640 | | nitrogen regulation protein NR(I) | low | > 80 |
| Pseudomonas sp. RS175 | 0.45 | PFR28_04480 | | Phosphate regulon sensor protein PhoR | 0.74 | PFR28_04944 | | DNA-binding transcriptional regulator NtrC | low | > 88 |
| Pseudomonas fluorescens FW300-N2E3 | 0.45 | AO353_09860 | | histidine kinase | 0.74 | AO353_12145 | | nitrogen regulation protein NR(I) | low | > 101 |
| Pseudomonas stutzeri RCH2 | 0.45 | Psest_3846 | | phosphate regulon sensor kinase PhoR | 0.73 | Psest_3932 | | nitrogen regulation protein NR(I) | low | > 67 |
| Pseudomonas fluorescens FW300-N1B4 | 0.45 | Pf1N1B4_2043 | | Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3) | 0.74 | Pf1N1B4_1611 | | Nitrogen regulation protein NR(I) | low | > 87 |
| Pseudomonas fluorescens GW456-L13 | 0.44 | PfGW456L13_761 | | Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3) | 0.74 | PfGW456L13_347 | | Nitrogen regulation protein NR(I) | low | > 87 |
| Acinetobacter radioresistens SK82 | 0.37 | MPMX26_02959 | | Phosphate regulon sensor protein PhoR | 0.66 | MPMX26_01292 | | DNA-binding transcriptional regulator NtrC | low | > 36 |
| Alteromonas macleodii MIT1002 | 0.36 | MIT1002_00752 | | Phosphate regulon sensor protein PhoR | 0.63 | MIT1002_03186 | | Nitrogen regulation protein NR(I) | low | > 70 |
| Vibrio cholerae E7946 ATCC 55056 | 0.35 | CSW01_03765 | | two-component system sensor histidine kinase PhoR | 0.64 | CSW01_13865 | | nitrogen regulation protein NR(I) | low | > 62 |
| Ralstonia solanacearum GMI1000 | 0.34 | RS_RS07700 | | phosphate regulon sensor histidine kinase PhoR | 0.55 | RS_RS06320 | | nitrogen regulation protein NR(I) | — | — |
| Ralstonia solanacearum PSI07 | 0.33 | RPSI07_RS15325 | | phosphate regulon sensor histidine kinase PhoR | 0.54 | RPSI07_RS17815 | | nitrogen regulation protein NR(I) | low | > 81 |
| Ralstonia solanacearum UW163 | 0.33 | UW163_RS15430 | | phosphate regulon sensor histidine kinase PhoR | 0.54 | UW163_RS13000 | | nitrogen regulation protein NR(I) | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.33 | RALBFv3_RS02120 | | phosphate regulon sensor histidine kinase PhoR | 0.54 | RALBFv3_RS15540 | | nitrogen regulation protein NR(I) | — | — |
| Klebsiella michiganensis M5al | 0.33 | BWI76_RS06235 | | PAS domain-containing sensor histidine kinase | 0.64 | BWI76_RS00385 | | nitrogen assimilation regulatory protein | low | > 92 |
| Enterobacter asburiae PDN3 | 0.33 | EX28DRAFT_2574 | | phosphate regulon sensor kinase PhoR | 0.64 | EX28DRAFT_4350 | | nitrogen regulation protein NR(I) | low | > 76 |
| Enterobacter sp. TBS_079 | 0.33 | MPMX20_00987 | | Phosphate regulon sensor protein PhoR | 0.64 | MPMX20_04597 | | DNA-binding transcriptional regulator NtrC | low | > 85 |
| Shewanella sp. ANA-3 | 0.32 | Shewana3_2878 | | PAS/PAC sensor signal transduction histidine kinase (RefSeq) | 0.65 | Shewana3_0258 | | nitrogen metabolism transcriptional regulator, NtrC, Fis family (RefSeq) | low | > 73 |
| Shewanella oneidensis MR-1 | 0.32 | SO1559 | phoR | phosphate regulon sensor protein PhoR (NCBI ptt file) | 0.65 | SO4472 | ntrC | nitrogen regulation protein NR(I) (NCBI ptt file) | low | > 76 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.32 | GFF4297 | | Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3) | 0.64 | GFF2220 | | Nitrogen regulation protein NR(I) | low | > 78 |
| Cupriavidus basilensis FW507-4G11 | 0.32 | RR42_RS13440 | | histidine kinase | 0.55 | RR42_RS12980 | | chemotaxis protein CheY | low | > 128 |
| Herbaspirillum seropedicae SmR1 | 0.32 | HSERO_RS06340 | | histidine kinase | 0.54 | HSERO_RS15680 | | chemotaxis protein CheY | low | > 78 |
| Ralstonia sp. UNC404CL21Col | 0.32 | ABZR87_RS14070 | | phosphate regulon sensor histidine kinase PhoR | 0.54 | ABZR87_RS11070 | | nitrogen regulation protein NR(I) | low | > 80 |
| Dechlorosoma suillum PS | 0.32 | Dsui_0864 | | phosphate regulon sensor kinase PhoR | 0.55 | Dsui_1051 | | nitrogen regulation protein NR(I) | low | > 51 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.31 | OHPLBJKB_03276 | | Phosphate regulon sensor protein PhoR | 0.64 | OHPLBJKB_04184 | | DNA-binding transcriptional regulator NtrC | low | > 73 |
| Escherichia coli BL21 | 0.31 | ECD_00348 | | sensory histidine kinase in two-component regulatory system with PhoB | 0.64 | ECD_03753 | | fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein | low | > 60 |
| Escherichia coli ECOR27 | 0.31 | NOLOHH_01470 | phoR | phosphate regulon sensor histidine kinase PhoR | 0.64 | NOLOHH_06240 | glnG | nitrogen regulation protein NR(I) | low | > 57 |
| Escherichia coli ECRC62 | 0.31 | BNILDI_22885 | phoR | phosphate regulon sensor histidine kinase PhoR | 0.64 | BNILDI_05290 | glnG | nitrogen regulation protein NR(I) | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.31 | GFF4236 | | Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3) | 0.52 | GFF5269 | | Nitrogen regulation protein NR(I) | low | > 90 |
| Escherichia coli BW25113 | 0.31 | b0400 | phoR | sensory histidine kinase in two-component regulatory system with PhoB (NCBI) | 0.64 | b3868 | glnG | fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein (NCBI) | low | > 76 |
| Escherichia coli ECOR38 | 0.31 | HEPCGN_07180 | phoR | phosphate regulon sensor histidine kinase PhoR | 0.64 | HEPCGN_12740 | glnG | nitrogen regulation protein NR(I) | low | > 85 |
| Escherichia fergusonii Becca | 0.31 | EFB2_03657 | | Phosphate regulon sensor protein PhoR | 0.64 | EFB2_04748 | | DNA-binding transcriptional regulator NtrC | low | > 86 |
| Escherichia coli Nissle 1917 | 0.31 | ECOLIN_RS02415 | | phosphate regulon sensor histidine kinase PhoR | 0.64 | ECOLIN_RS22295 | | nitrogen regulation protein NR(I) | low | > 52 |
| Escherichia coli ECRC99 | 0.31 | KEDOAH_19425 | phoR | phosphate regulon sensor histidine kinase PhoR | 0.64 | KEDOAH_14040 | glnG | nitrogen regulation protein NR(I) | — | — |
| Escherichia coli ECRC101 | 0.31 | MCAODC_27765 | phoR | phosphate regulon sensor histidine kinase PhoR | 0.64 | MCAODC_04610 | glnG | nitrogen regulation protein NR(I) | — | — |
| Serratia liquefaciens MT49 | 0.31 | IAI46_04780 | | phosphate regulon sensor histidine kinase PhoR | 0.65 | IAI46_24960 | | nitrogen regulation protein NR(I) | low | > 86 |
| Escherichia coli ECRC98 | 0.31 | JDDGAC_12195 | phoR | phosphate regulon sensor histidine kinase PhoR | 0.64 | JDDGAC_17735 | glnG | nitrogen regulation protein NR(I) | — | — |
| Escherichia coli ECRC102 | 0.31 | NIAGMN_06595 | phoR | phosphate regulon sensor histidine kinase PhoR | 0.64 | NIAGMN_11865 | glnG | nitrogen regulation protein NR(I) | — | — |
| Escherichia coli ECRC101 | 0.31 | OKFHMN_08540 | phoR | phosphate regulon sensor histidine kinase PhoR | 0.64 | OKFHMN_14110 | glnG | nitrogen regulation protein NR(I) | — | — |
| Paraburkholderia graminis OAS925 | 0.31 | ABIE53_002989 | | two-component system phosphate regulon sensor histidine kinase PhoR | 0.54 | ABIE53_002804 | | two-component system nitrogen regulation response regulator GlnG | low | > 113 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.31 | H281DRAFT_04417 | | two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR | 0.53 | H281DRAFT_00454 | | nitrogen metabolism transcriptional regulator, NtrC, Fis family | low | > 103 |
| Pectobacterium carotovorum WPP14 | 0.31 | HER17_RS16035 | | phosphate regulon sensor histidine kinase PhoR | 0.64 | HER17_RS21440 | | nitrogen regulation protein NR(I) | low | > 75 |
| Shewanella amazonensis SB2B | 0.30 | Sama_1075 | | phosphate regulon sensor protein PhoR (RefSeq) | 0.65 | Sama_3427 | | response regulator receiver protein (RefSeq) | low | > 62 |
| Variovorax sp. OAS795 | 0.30 | ABID97_RS14625 | | phosphate regulon sensor histidine kinase PhoR | 0.53 | ABID97_RS09945 | | nitrogen regulation protein NR(I) | low | > 91 |
| Variovorax sp. SCN45 | 0.30 | GFF1098 | | Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3) | 0.53 | GFF3066 | | Nitrogen regulation protein NR(I), GlnG (=NtrC) | — | — |
| Shewanella loihica PV-4 | 0.30 | Shew_2748 | | PAS/PAC sensor signal transduction histidine kinase (RefSeq) | 0.65 | Shew_3561 | | nitrogen metabolism transcriptional regulator, NtrC, Fis family (RefSeq) | low | > 60 |
| Burkholderia phytofirmans PsJN | 0.30 | BPHYT_RS14115 | | sensor histidine kinase | 0.54 | BPHYT_RS12935 | | chemotaxis protein CheY | low | > 109 |
| Rahnella sp. WP5 | 0.30 | EX31_RS22045 | | phosphate regulon sensor histidine kinase PhoR | 0.65 | EX31_RS15880 | | nitrogen regulation protein NR(I) | low | > 89 |
| Dickeya dianthicola 67-19 | 0.30 | HGI48_RS05490 | | phosphate regulon sensor histidine kinase PhoR | 0.64 | HGI48_RS21235 | | nitrogen regulation protein NR(I) | low | > 71 |
| Dickeya dianthicola ME23 | 0.30 | DZA65_RS05815 | | phosphate regulon sensor histidine kinase PhoR | 0.64 | DZA65_RS22210 | | nitrogen regulation protein NR(I) | low | > 75 |
| Paraburkholderia sabiae LMG 24235 | 0.29 | QEN71_RS04850 | | phosphate regulon sensor histidine kinase PhoR | 0.54 | QEN71_RS05675 | | nitrogen regulation protein NR(I) | low | > 153 |
| Dickeya dadantii 3937 | 0.29 | DDA3937_RS05430 | | phosphate regulon sensor histidine kinase PhoR | 0.64 | DDA3937_RS00125 | | nitrogen regulation protein NR(I) | low | > 74 |
| Pantoea sp. MT58 | 0.29 | IAI47_14850 | | phosphate regulon sensor histidine kinase PhoR | 0.64 | IAI47_00450 | | nitrogen regulation protein NR(I) | low | > 76 |
| Lysobacter sp. OAE881 | 0.29 | ABIE51_RS14225 | | phosphate regulon sensor histidine kinase PhoR | 0.47 | ABIE51_RS01360 | | nitrogen regulation protein NR(I) | low | > 62 |
| Erwinia tracheiphila SCR3 | 0.29 | LU632_RS18920 | phoR | phosphate regulon sensor histidine kinase PhoR | 0.64 | LU632_RS22135 | glnG | nitrogen regulation protein NR(I) | low | > 74 |
| Castellaniella sp019104865 MT123 | 0.28 | ABCV34_RS14465 | | phosphate regulon sensor histidine kinase PhoR | 0.49 | ABCV34_RS03540 | | nitrogen regulation protein NR(I) | low | > 48 |
| Rhodanobacter sp. FW510-T8 | 0.26 | OKGIIK_03785 | phoR | phosphate regulon sensor histidine kinase PhoR | 0.42 | OKGIIK_14465 | ntrC | nitrogen regulation protein NR(I) | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.26 | Xcc-8004.4063.1 | | Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3) | 0.47 | Xcc-8004.252.1 | | Nitrogen regulation protein NtrC | low | > 74 |
| Azospirillum sp. SherDot2 | 0.18 | MPMX19_02582 | | Alkaline phosphatase synthesis sensor protein PhoR | 0.40 | MPMX19_01112 | | DNA-binding transcriptional regulator NtrC | — | — |
Not shown: 2 genomes with orthologs for HP15_3355 only; 24 genomes with orthologs for HP15_425 only