| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Marinobacter adhaerens HP15 | 1.0 | HP15_2451 | | ribonuclease, Rne/Rng family | 1.0 | HP15_3968 | | two component transcriptional regulator, winged helix family | 0.42 | 9 |
| Pseudomonas stutzeri RCH2 | 0.68 | Psest_3323 | | ribonuclease, Rne/Rng family | 0.47 | Psest_3476 | | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | low | > 67 |
| Pseudomonas fluorescens SBW25-INTG | 0.67 | PFLU_RS04325 | | ribonuclease G | 0.46 | PFLU_RS15245 | | response regulator | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.67 | PFLU_RS04325 | | ribonuclease G | 0.46 | PFLU_RS15245 | | response regulator | low | > 109 |
| Pseudomonas fluorescens FW300-N1B4 | 0.67 | Pf1N1B4_1095 | | Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) | 0.46 | Pf1N1B4_4454 | | Two-component system response regulator QseB | — | — |
| Pseudomonas simiae WCS417 | 0.67 | PS417_04270 | | ribonuclease G | 0.45 | PS417_13595 | | XRE family transcriptional regulator | low | > 88 |
| Pseudomonas fluorescens FW300-N2E3 | 0.67 | AO353_05230 | | ribonuclease G | 0.38 | AO353_23010 | | XRE family transcriptional regulator | low | > 101 |
| Pseudomonas fluorescens GW456-L13 | 0.67 | PfGW456L13_5029 | | Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) | 0.46 | PfGW456L13_3169 | | Two-component system response regulator QseB | low | > 87 |
| Pseudomonas putida KT2440 | 0.67 | PP_0937 | | endoribonuclease G (RNAse G) | 0.44 | PP_2713 | | DNA-binding response regulator | low | > 96 |
| Pseudomonas syringae pv. syringae B728a | 0.66 | Psyr_4159 | | RNAse G | 0.39 | Psyr_3511 | | Response regulator receiver:Transcriptional regulatory protein, C-terminal | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.66 | Psyr_4159 | | RNAse G | 0.39 | Psyr_3511 | | Response regulator receiver:Transcriptional regulatory protein, C-terminal | low | > 86 |
| Pseudomonas sp. RS175 | 0.66 | PFR28_00158 | | Ribonuclease G | 0.45 | PFR28_02328 | | Transcriptional regulatory protein QseB | low | > 88 |
| Pseudomonas sp. S08-1 | 0.66 | OH686_08595 | | Ribonuclease G | 0.45 | OH686_04665 | | Two-component system response regulator QseB | low | > 80 |
| Pseudomonas fluorescens FW300-N2C3 | 0.66 | AO356_07110 | | ribonuclease G | 0.46 | AO356_23845 | | XRE family transcriptional regulator | low | > 104 |
| Pseudomonas fluorescens FW300-N2E2 | 0.66 | Pf6N2E2_3283 | | Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) | 0.46 | Pf6N2E2_1539 | | Two-component system response regulator QseB | low | > 103 |
| Rhodanobacter sp. FW510-T8 | 0.58 | OKGIIK_10290 | rng | ribonuclease G | 0.37 | OKGIIK_14050 | ompR | DNA-binding response regulator | low | > 52 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.58 | GFF2138 | | Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) | 0.41 | GFF3138 | | Two-component system response regulator QseB | low | > 78 |
| Vibrio cholerae E7946 ATCC 55056 | 0.57 | CSW01_02205 | | ribonuclease E/G | 0.37 | CSW01_19595 | | DNA-binding response regulator | low | > 62 |
| Dickeya dianthicola ME23 | 0.57 | DZA65_RS01430 | | ribonuclease G | 0.39 | DZA65_RS22325 | | response regulator | low | > 75 |
| Dickeya dianthicola 67-19 | 0.57 | HGI48_RS01370 | | ribonuclease G | 0.40 | HGI48_RS21345 | | response regulator | low | > 71 |
| Enterobacter asburiae PDN3 | 0.57 | EX28DRAFT_3297 | | ribonuclease, Rne/Rng family | 0.41 | EX28DRAFT_3057 | | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | low | > 76 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.57 | OHPLBJKB_00458 | | Ribonuclease G | 0.41 | OHPLBJKB_00677 | | Transcriptional regulatory protein QseB | low | > 73 |
| Escherichia coli ECOR27 | 0.57 | NOLOHH_09530 | rng | ribonuclease G | 0.41 | NOLOHH_10660 | | Transcriptional regulatory protein QseB | low | > 57 |
| Escherichia coli BW25113 | 0.57 | b3247 | cafA | bundles of cytoplasmic filaments (VIMSS) | 0.41 | b3025 | qseB | DNA-binding response regulator in two-component regulatory system with QseC (NCBI) | low | > 76 |
| Escherichia coli ECRC102 | 0.57 | NIAGMN_15505 | rng | ribonuclease G | 0.41 | NIAGMN_16645 | | Transcriptional regulatory protein QseB | — | — |
| Escherichia coli ECRC98 | 0.57 | JDDGAC_21370 | rng | ribonuclease G | 0.41 | JDDGAC_22515 | | Transcriptional regulatory protein QseB | — | — |
| Escherichia coli ECRC99 | 0.57 | KEDOAH_10405 | rng | ribonuclease G | 0.41 | KEDOAH_09265 | | Transcriptional regulatory protein QseB | — | — |
| Escherichia coli ECOR38 | 0.57 | HEPCGN_16610 | rng | ribonuclease G | 0.41 | HEPCGN_17740 | | Quorum sensing DNA-binding response regulator in two-component regulatory system with QseC | low | > 85 |
| Klebsiella michiganensis M5al | 0.57 | BWI76_RS25480 | | ribonuclease E/G | 0.42 | BWI76_RS24335 | | two-component system response regulator QseB | low | > 92 |
| Escherichia coli ECRC101 | 0.57 | OKFHMN_17745 | rng | ribonuclease G | 0.41 | OKFHMN_18880 | | Transcriptional regulatory protein QseB | — | — |
| Escherichia coli BL21 | 0.57 | ECD_03106 | | ribonuclease G | 0.41 | ECD_02897 | | quorum sensing DNA-binding response regulator in two-component regulatory system with QseC | low | > 60 |
| Escherichia coli Nissle 1917 | 0.57 | ECOLIN_RS18605 | | ribonuclease G | 0.41 | ECOLIN_RS17425 | | quorum sensing response regulator transcription factor QseB | low | > 52 |
| Escherichia fergusonii Becca | 0.57 | EFB2_00584 | | Ribonuclease G | 0.41 | EFB2_00788 | | Transcriptional regulatory protein QseB | low | > 86 |
| Escherichia coli ECRC101 | 0.57 | MCAODC_08265 | rng | ribonuclease G | 0.41 | MCAODC_09395 | | Transcriptional regulatory protein QseB | — | — |
| Escherichia coli ECRC62 | 0.57 | BNILDI_01990 | rng | ribonuclease G | 0.41 | BNILDI_00855 | | Transcriptional regulatory protein QseB | — | — |
| Acinetobacter radioresistens SK82 | 0.57 | MPMX26_00646 | | Ribonuclease G | 0.39 | MPMX26_02034 | | Transcriptional regulatory protein QseB | — | — |
| Enterobacter sp. TBS_079 | 0.57 | MPMX20_04153 | | Ribonuclease G | 0.42 | MPMX20_03863 | | Transcriptional regulatory protein QseB | low | > 85 |
| Dyella japonica UNC79MFTsu3.2 | 0.57 | ABZR86_RS21730 | | ribonuclease G | 0.39 | ABZR86_RS01270 | | response regulator | low | > 74 |
| Dechlorosoma suillum PS | 0.56 | Dsui_0434 | | ribonuclease, Rne/Rng family | 0.37 | Dsui_3448 | | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | low | > 51 |
| Rhodanobacter denitrificans MT42 | 0.56 | LRK55_RS03155 | | ribonuclease G | 0.38 | LRK55_RS07340 | | response regulator | low | > 63 |
| Pectobacterium carotovorum WPP14 | 0.56 | HER17_RS20150 | | ribonuclease G | 0.37 | HER17_RS21560 | | response regulator | low | > 75 |
| Serratia liquefaciens MT49 | 0.56 | IAI46_22700 | | ribonuclease G | 0.37 | IAI46_20825 | | response regulator | low | > 86 |
| Rhodanobacter denitrificans FW104-10B01 | 0.56 | LRK54_RS03405 | | ribonuclease G | 0.38 | LRK54_RS07600 | | response regulator | low | > 59 |
| Erwinia tracheiphila SCR3 | 0.56 | LU632_RS21430 | rng | ribonuclease G | 0.37 | LU632_RS21175 | pmrA | two-component system response regulator PmrA | low | > 74 |
| Shewanella sp. ANA-3 | 0.56 | Shewana3_3644 | | ribonuclease G (RefSeq) | 0.39 | Shewana3_1885 | | two component transcriptional regulator (RefSeq) | low | > 73 |
| Shewanella oneidensis MR-1 | 0.56 | SO4094 | cafA | ribonuclease G (NCBI ptt file) | 0.39 | SO2104 | | DNA-binding response regulator YgiX, putative (NCBI ptt file) | low | > 76 |
| Rahnella sp. WP5 | 0.56 | EX31_RS12255 | | ribonuclease G | 0.39 | EX31_RS03275 | | response regulator | low | > 89 |
| Pantoea sp. MT58 | 0.56 | IAI47_02455 | | ribonuclease G | 0.42 | IAI47_00340 | | response regulator | low | > 76 |
| Paraburkholderia sabiae LMG 24235 | 0.55 | QEN71_RS24430 | | ribonuclease G | 0.41 | QEN71_RS02475 | | response regulator | low | > 153 |
| Burkholderia phytofirmans PsJN | 0.55 | BPHYT_RS06375 | | ribonuclease | 0.42 | BPHYT_RS16220 | | transcriptional regulator | — | — |
| Paraburkholderia graminis OAS925 | 0.55 | ABIE53_001538 | | ribonuclease G | 0.43 | ABIE53_003418 | | two-component system response regulator QseB | low | > 113 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.55 | H281DRAFT_04515 | | RNAse G | 0.42 | H281DRAFT_04180 | | two component transcriptional regulator, winged helix family | low | > 103 |
| Herbaspirillum seropedicae SmR1 | 0.53 | HSERO_RS17790 | | ribonuclease | 0.40 | HSERO_RS21985 | | transcriptional regulator | — | — |
| Castellaniella sp019104865 MT123 | 0.52 | ABCV34_RS02480 | | ribonuclease G | 0.37 | ABCV34_RS11770 | | response regulator | low | > 48 |
| Acidovorax sp. GW101-3H11 | 0.52 | Ac3H11_2416 | | Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) | 0.35 | Ac3H11_1263 | | Response regulator receiver:Transcriptional regulatory protein, C- terminal | low | > 79 |
| Ralstonia sp. UNC404CL21Col | 0.52 | ABZR87_RS15440 | | ribonuclease G | 0.38 | ABZR87_RS22890 | | response regulator transcription factor | low | > 80 |
| Ralstonia solanacearum PSI07 | 0.51 | RPSI07_RS13650 | | ribonuclease G | 0.38 | RPSI07_RS08050 | | DNA-binding response regulator | — | — |
| Ralstonia solanacearum GMI1000 | 0.51 | RS_RS11025 | | ribonuclease G | 0.37 | RS_RS24590 | | DNA-binding response regulator | — | — |
| Ralstonia solanacearum UW163 | 0.51 | UW163_RS10095 | | ribonuclease G | 0.39 | UW163_RS04360 | | DNA-binding response regulator | — | — |
| Variovorax sp. OAS795 | 0.51 | ABID97_RS16705 | | ribonuclease G | 0.39 | ABID97_RS14955 | | response regulator | low | > 91 |
| Ralstonia solanacearum IBSBF1503 | 0.51 | RALBFv3_RS03575 | | ribonuclease G | 0.39 | RALBFv3_RS09230 | | DNA-binding response regulator | — | — |
| Variovorax sp. SCN45 | 0.51 | GFF295 | | Ribonuclease G | 0.40 | GFF1175 | | Two-component system response regulator QseB | low | > 127 |
| Cupriavidus basilensis FW507-4G11 | 0.51 | RR42_RS04700 | | ribonuclease G | 0.37 | RR42_RS37390 | | XRE family transcriptional regulator | low | > 128 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.49 | GFF4531 | | Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) | 0.39 | GFF3523 | | Two-component system response regulator QseB | low | > 90 |
Not shown: 8 genomes with orthologs for HP15_2451 only; 1 genomes with orthologs for HP15_3968 only