Conservation of cofitness between PS417_20020 and PS417_20050 in Pseudomonas simiae WCS417

47 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_20020 cobalamin synthase 1.0 PS417_20050 cobalamin biosynthesis protein CobD 0.65 3
Pseudomonas fluorescens SBW25-INTG 0.82 PFLU_RS21985 adenosylcobinamide-GDP ribazoletransferase 0.98 PFLU_RS22015 cobalamin biosynthesis protein 0.61 6
Pseudomonas fluorescens SBW25 0.82 PFLU_RS21985 adenosylcobinamide-GDP ribazoletransferase 0.98 PFLU_RS22015 cobalamin biosynthesis protein 0.80 7
Pseudomonas sp. RS175 0.75 PFR28_03200 Adenosylcobinamide-GDP ribazoletransferase 0.84 PFR28_03206 Cobalamin biosynthesis protein CobD 0.74 1
Pseudomonas fluorescens GW456-L13 0.72 PfGW456L13_4234 Cobalamin synthase 0.91 PfGW456L13_4240 Adenosylcobinamide-phosphate synthase (EC 6.3.1.10) 0.70 5
Pseudomonas syringae pv. syringae B728a ΔmexB 0.68 Psyr_3672 cobalamin-5'-phosphate synthase 0.90 Psyr_3678 adenosylcobinamide-phosphate synthase 0.65 6
Pseudomonas syringae pv. syringae B728a 0.68 Psyr_3672 cobalamin-5'-phosphate synthase 0.90 Psyr_3678 adenosylcobinamide-phosphate synthase 0.46 13
Pseudomonas fluorescens FW300-N2E3 0.67 AO353_02595 cobalamin synthase 0.92 AO353_02625 cobalamin biosynthesis protein CobD 0.58 7
Pseudomonas fluorescens FW300-N2C3 0.62 AO356_19180 cobalamin synthase 0.85 AO356_19150 cobalamin biosynthesis protein CobD 0.59 8
Pseudomonas fluorescens FW300-N2E2 0.59 Pf6N2E2_5746 Cobalamin synthase 0.90 Pf6N2E2_5740 Adenosylcobinamide-phosphate synthase (EC 6.3.1.10) 0.44 12
Pseudomonas fluorescens FW300-N1B4 0.59 Pf1N1B4_3715 Cobalamin synthase 0.93 Pf1N1B4_3709 Adenosylcobinamide-phosphate synthase (EC 6.3.1.10) 0.37 25
Pseudomonas putida KT2440 0.53 PP_1681 cobalamin 5'-phosphate synthase / Cobalamin synthase 0.84 PP_1675 Subunit of adenosylcobinamide-phosphate synthase beta component 0.83 3
Pseudomonas sp. S08-1 0.46 OH686_04945 cobalamin 5'-phosphate synthase 0.70 OH686_04975 cobalamin biosynthesis protein CobD low > 80
Pseudomonas stutzeri RCH2 0.42 Psest_3004 cobalamin 5'-phosphate synthase/cobalamin synthase 0.65 Psest_3010 cobalamin biosynthesis protein CobD low > 67
Lysobacter sp. OAE881 0.38 ABIE51_RS04985 adenosylcobinamide-GDP ribazoletransferase 0.53 ABIE51_RS04955 adenosylcobinamide-phosphate synthase CbiB low > 62
Dyella japonica UNC79MFTsu3.2 0.36 ABZR86_RS10880 adenosylcobinamide-GDP ribazoletransferase 0.52 ABZR86_RS10910 adenosylcobinamide-phosphate synthase CbiB low > 74
Rhodanobacter sp. FW510-T8 0.30 OKGIIK_05520 adenosylcobinamide-GDP ribazoletransferase 0.52 OKGIIK_05490 cbiB adenosylcobinamide-phosphate synthase CbiB low > 52
Xanthomonas campestris pv. campestris strain 8004 0.30 Xcc-8004.1400.1 Cobalamin synthase (EC 2.7.8.26) 0.51 Xcc-8004.1395.1 Adenosylcobinamide-phosphate synthase (EC 6.3.1.10) low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.21 GFF3968 Cobalamin synthase (EC 2.7.8.26) 0.25 GFF3951 Adenosylcobinamide-phosphate synthase (EC 6.3.1.10) low > 78
Klebsiella michiganensis M5al 0.20 BWI76_RS18750 adenosylcobinamide-GDP ribazoletransferase 0.25 BWI76_RS23085 adenosylcobinamide-phosphate synthase — —
Fusobacterium nucleatum SB010 0.19 HUW76_05620 adenosylcobinamide-GDP ribazoletransferase 0.24 HUW76_05240 cobalamin biosynthesis protein CobD low > 35
Paraburkholderia sabiae LMG 24235 0.19 QEN71_RS25125 adenosylcobinamide-GDP ribazoletransferase 0.51 QEN71_RS25105 adenosylcobinamide-phosphate synthase CbiB low > 153
Shewanella oneidensis MR-1 0.18 SO1036 cobS cobalamin 5'-phosphate synthase (NCBI ptt file) 0.13 SO1321 CobD-related protein (NCBI ptt file) low > 76
Hydrogenophaga sp. GW460-11-11-14-LB1 0.18 GFF4000 Cobalamin synthase 0.23 GFF3996 Adenosylcobinamide-phosphate synthase (EC 6.3.1.10) low > 90
Shewanella loihica PV-4 0.17 Shew_0715 cobalamin 5'-phosphate synthase (RefSeq) 0.12 Shew_1026 cobalamin biosynthesis protein CbiB (RefSeq) low > 60
Agrobacterium fabrum C58 0.17 Atu1891 cobalamin biosynthesis protein 0.17 Atu2809 cobalamin biosynthesis protein 0.61 3
Burkholderia phytofirmans PsJN 0.17 BPHYT_RS04870 cobalamin synthase 0.50 BPHYT_RS04890 cobalamin biosynthesis protein CobD low > 109
Sinorhizobium meliloti 1021 0.16 SMc04215 cobalamin synthase 0.24 SMc04279 cobalamin biosynthesis protein — —
Vibrio cholerae E7946 ATCC 55056 0.16 CSW01_06265 adenosylcobinamide-GDP ribazoletransferase 0.15 CSW01_12050 adenosylcobinamide-phosphate synthase low > 62
Shewanella sp. ANA-3 0.16 Shewana3_3277 cobS cobalamin synthase (RefSeq) 0.13 Shewana3_3053 cobalamin biosynthesis protein CbiB (RefSeq) low > 73
Sphingomonas koreensis DSMZ 15582 0.16 Ga0059261_0627 cobalamin-5'-phosphate synthase (EC 2.7.8.26) 0.21 Ga0059261_0629 cobalamin biosynthesis protein CobD low > 68
Phaeobacter inhibens DSM 17395 0.16 PGA1_c07560 putative cobalamin-5-phosphate synthase 0.26 PGA1_c00820 putative cobalamin biosynthesis protein CobD — —
Shewanella amazonensis SB2B 0.16 Sama_0763 cobalamin 5'-phosphate synthase (RefSeq) 0.18 Sama_0854 CobD-related protein (RefSeq) low > 62
Paraburkholderia bryophila 376MFSha3.1 0.16 H281DRAFT_00140 cobalamin-5'-phosphate synthase 0.47 H281DRAFT_00144 adenosylcobinamide-phosphate synthase (EC 6.3.1.10) — —
Ralstonia solanacearum PSI07 0.15 RPSI07_RS12895 adenosylcobinamide-GDP ribazoletransferase 0.50 RPSI07_RS12915 cobalamin biosynthesis protein 0.65 11
Ralstonia solanacearum UW163 0.15 UW163_RS09195 adenosylcobinamide-GDP ribazoletransferase 0.48 UW163_RS09215 cobalamin biosynthesis protein — —
Ralstonia solanacearum IBSBF1503 0.15 RALBFv3_RS04475 adenosylcobinamide-GDP ribazoletransferase 0.48 RALBFv3_RS04455 cobalamin biosynthesis protein 0.38 31
Ralstonia solanacearum GMI1000 0.15 RS_RS12030 adenosylcobinamide-GDP ribazoletransferase 0.47 RS_RS12010 cobalamin biosynthesis protein low > 80
Ralstonia sp. UNC404CL21Col 0.15 ABZR87_RS00070 adenosylcobinamide-GDP ribazoletransferase 0.49 ABZR87_RS00050 adenosylcobinamide-phosphate synthase CbiB low > 80
Herbaspirillum seropedicae SmR1 0.14 HSERO_RS09775 cobalamin synthase 0.46 HSERO_RS13240 cobalamin biosynthesis protein CobD 0.61 8
Rhodopseudomonas palustris CGA009 0.13 TX73_006455 adenosylcobinamide-GDP ribazoletransferase 0.24 TX73_003720 adenosylcobinamide-phosphate synthase CbiB — —
Cupriavidus basilensis FW507-4G11 0.13 RR42_RS16115 cobalamin synthase 0.41 RR42_RS16085 cobalamin biosynthesis protein CobD low > 128
Dechlorosoma suillum PS 0.13 Dsui_0471 cobalamin 5''-phosphate synthase/cobalamin synthase 0.52 Dsui_0541 cobalamin biosynthesis protein CobD low > 51
Dinoroseobacter shibae DFL-12 0.13 Dshi_0787 cobalamin-5-phosphate synthase CobS (RefSeq) 0.23 Dshi_0165 cobalamin biosynthesis protein CobD (RefSeq) — —
Rhizobium sp. OAE497 0.13 ABIE40_RS10725 adenosylcobinamide-GDP ribazoletransferase 0.23 ABIE40_RS11095 adenosylcobinamide-phosphate synthase CbiB 0.89 35
Azospirillum brasilense Sp245 0.13 AZOBR_RS03450 cobalamin synthase 0.22 AZOBR_RS10235 cobalamin biosynthesis protein CobD low > 97
Bosea sp. OAE506 0.12 ABIE41_RS21250 adenosylcobinamide-GDP ribazoletransferase 0.20 ABIE41_RS01755 adenosylcobinamide-phosphate synthase CbiB — —
Variovorax sp. SCN45 0.12 GFF424 Cobalamin synthase (EC 2.7.8.26) 0.21 GFF439 Adenosylcobinamide-phosphate synthase (EC 6.3.1.10) low > 127

Not shown: 15 genomes with orthologs for PS417_20020 only; 14 genomes with orthologs for PS417_20050 only