Conservation of cofitness between Psest_3653 and Psest_3708 in Pseudomonas stutzeri RCH2

62 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_3653 4-aminobutyrate aminotransferase, prokaryotic type 1.0 Psest_3708 Arabinose efflux permease 0.24 15
Pseudomonas fluorescens FW300-N2E3 0.86 AO353_11510 5-aminovalerate transaminase (EC 2.6.1.48) (from data) 0.70 AO353_12595 hypothetical protein low > 101
Pseudomonas fluorescens GW456-L13 0.85 PfGW456L13_494 5-aminovalerate aminotransferase (EC 2.6.1.48) / Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) 0.68 PfGW456L13_256 Permeases of the major facilitator superfamily low > 87
Pseudomonas sp. RS175 0.85 PFR28_04756 5-aminovalerate aminotransferase DavT 0.69 PFR28_05018 Inner membrane transport protein YnfM low > 88
Pseudomonas fluorescens FW300-N2C3 0.85 AO356_10715 4-aminobutyrate aminotransferase 0.69 AO356_09295 hypothetical protein low > 104
Pseudomonas fluorescens FW300-N1B4 0.85 Pf1N1B4_1733 5-aminovalerate aminotransferase (EC 2.6.1.48) / Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) 0.69 Pf1N1B4_1531 Permeases of the major facilitator superfamily 0.20 71
Pseudomonas fluorescens FW300-N2E2 0.85 Pf6N2E2_4013 5-aminovalerate transaminase (EC 2.6.1.48) (from data) 0.67 Pf6N2E2_3736 Permeases of the major facilitator superfamily low > 103
Pseudomonas fluorescens SBW25-INTG 0.84 PFLU_RS00915 4-aminobutyrate--2-oxoglutarate transaminase 0.67 PFLU_RS02060 MFS transporter low > 109
Pseudomonas fluorescens SBW25 0.84 PFLU_RS00915 4-aminobutyrate--2-oxoglutarate transaminase 0.67 PFLU_RS02060 MFS transporter low > 109
Pseudomonas simiae WCS417 0.84 PS417_00900 4-aminobutyrate aminotransferase 0.66 PS417_02015 membrane protein low > 88
Pseudomonas putida KT2440 0.84 PP_0214 4-aminobutyrate aminotransferase 0.68 PP_5072 efflux transporter low > 96
Pseudomonas syringae pv. syringae B728a 0.83 Psyr_0090 4-aminobutyrate aminotransferase apoenzyme 0.66 Psyr_0420 General substrate transporter:Major facilitator superfamily low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.83 Psyr_0090 4-aminobutyrate aminotransferase apoenzyme 0.66 Psyr_0420 General substrate transporter:Major facilitator superfamily low > 86
Pseudomonas sp. S08-1 0.81 OH686_11880 4-aminobutyrate transaminase 0.10 OH686_23535 Uncharacterized MFS-type transporter low > 80
Escherichia coli BW25113 0.78 b2662 gabT 4-aminobutyrate aminotransferase (NCBI) 0.58 b1596 ynfM predicted transporter (NCBI) low > 76
Escherichia coli ECOR27 0.77 NOLOHH_12735 gabT 4-aminobutyrate--2-oxoglutarate transaminase 0.58 NOLOHH_18235 araJ MFS transporter — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.77 OHPLBJKB_01070 4-aminobutyrate aminotransferase GabT 0.58 OHPLBJKB_02130 Inner membrane transport protein YnfM low > 73
Escherichia coli ECRC102 0.77 NIAGMN_18675 gabT 4-aminobutyrate--2-oxoglutarate transaminase 0.58 NIAGMN_00345 ynfM Inner membrane transport protein YnfM — —
Escherichia coli ECRC99 0.77 KEDOAH_07230 gabT 4-aminobutyrate--2-oxoglutarate transaminase 0.58 KEDOAH_00375 araJ MFS transporter — —
Escherichia coli ECRC101 0.77 MCAODC_11430 gabT 4-aminobutyrate--2-oxoglutarate transaminase 0.58 MCAODC_17680 ynfM Inner membrane transport protein YnfM — —
Escherichia coli ECRC101 0.77 OKFHMN_20910 gabT 4-aminobutyrate--2-oxoglutarate transaminase 0.58 OKFHMN_27730 ynfM Inner membrane transport protein YnfM — —
Escherichia coli ECRC98 0.77 JDDGAC_24570 gabT 4-aminobutyrate--2-oxoglutarate transaminase 0.58 JDDGAC_02320 ynfM Inner membrane transport protein YnfM — —
Escherichia coli BL21 0.77 ECD_02518 4-aminobutyrate aminotransferase, PLP-dependent 0.58 ECD_01565 putative arabinose efflux transporter low > 60
Escherichia coli ECRC62 0.77 BNILDI_11295 gabT 4-aminobutyrate--2-oxoglutarate transaminase 0.58 BNILDI_17025 ynfM Inner membrane transport protein YnfM — —
Escherichia coli ECOR38 0.77 HEPCGN_20155 gabT 4-aminobutyrate--2-oxoglutarate transaminase 0.58 HEPCGN_06105 ynfM Inner membrane transport protein YnfM low > 85
Escherichia coli Nissle 1917 0.77 ECOLIN_RS14845 4-aminobutyrate--2-oxoglutarate transaminase 0.58 ECOLIN_RS08915 MFS transporter — —
Escherichia fergusonii Becca 0.77 EFB2_01268 4-aminobutyrate aminotransferase GabT 0.58 EFB2_02396 Inner membrane transport protein YnfM low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.76 GFF1567 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) 0.54 GFF1787 Permeases of the major facilitator superfamily 0.36 51
Shewanella amazonensis SB2B 0.67 Sama_2636 gamma-aminobutyrate transaminase (EC 2.6.1.19) (from data) 0.20 Sama_2214 multidrug resistance protein, putative (RefSeq) low > 62
Shewanella sp. ANA-3 0.67 Shewana3_3091 4-aminobutyrate aminotransferase (RefSeq) 0.21 Shewana3_1692 Xaa-His dipeptidase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.66 SO1276 gabT 4-aminobutyrate aminotransferase (NCBI ptt file) 0.21 SO1917 multidrug resistance protein, putative (NCBI ptt file) 0.31 16
Acidovorax sp. GW101-3H11 0.64 Ac3H11_4179 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) 0.09 Ac3H11_626 putative membrane transport protein low > 79
Azospirillum brasilense Sp245 0.58 AZOBR_RS19630 4-aminobutyrate aminotransferase 0.45 AZOBR_RS10210 membrane protein low > 97
Azospirillum sp. SherDot2 0.57 MPMX19_04919 5-aminovalerate aminotransferase DavT 0.43 MPMX19_01172 Inner membrane transport protein YnfM low > 112
Herbaspirillum seropedicae SmR1 0.56 HSERO_RS05420 4-aminobutyrate aminotransferase 0.38 HSERO_RS00235 MFS transporter low > 78
Ralstonia sp. UNC404CL21Col 0.55 ABZR87_RS05190 4-aminobutyrate--2-oxoglutarate transaminase 0.38 ABZR87_RS03160 MFS transporter low > 80
Pectobacterium carotovorum WPP14 0.55 HER17_RS09880 4-aminobutyrate--2-oxoglutarate transaminase 0.56 HER17_RS10745 MFS transporter low > 75
Paraburkholderia sabiae LMG 24235 0.54 QEN71_RS19980 4-aminobutyrate--2-oxoglutarate transaminase 0.40 QEN71_RS00405 MFS transporter low > 153
Acinetobacter radioresistens SK82 0.54 MPMX26_01998 4-aminobutyrate aminotransferase PuuE 0.40 MPMX26_00126 Inner membrane transport protein YnfM — —
Paraburkholderia bryophila 376MFSha3.1 0.54 H281DRAFT_03179 4-aminobutyrate aminotransferase apoenzyme 0.39 H281DRAFT_02192 MFS transporter, YNFM family, putative membrane transport protein low > 103
Ralstonia solanacearum GMI1000 0.54 RS_RS00145 4-aminobutyrate--2-oxoglutarate transaminase 0.42 RS_RS15415 MFS transporter low > 80
Ralstonia solanacearum PSI07 0.54 RPSI07_RS23805 4-aminobutyrate--2-oxoglutarate transaminase 0.40 RPSI07_RS09770 MFS transporter low > 81
Enterobacter asburiae PDN3 0.53 EX28DRAFT_4294 4-aminobutyrate aminotransferase, prokaryotic type 0.55 EX28DRAFT_1495 Arabinose efflux permease low > 76
Enterobacter sp. TBS_079 0.53 MPMX20_04337 4-aminobutyrate aminotransferase PuuE 0.57 MPMX20_02061 Inner membrane transport protein YnfM low > 85
Burkholderia phytofirmans PsJN 0.53 BPHYT_RS22435 4-aminobutyrate aminotransferase 0.39 BPHYT_RS01705 MFS transporter low > 109
Klebsiella michiganensis M5al 0.53 BWI76_RS26375 aspartate aminotransferase family protein 0.56 BWI76_RS15965 MFS transporter low > 92
Paraburkholderia graminis OAS925 0.53 ABIE53_004117 4-aminobutyrate aminotransferase 0.41 ABIE53_000436 YNFM family putative membrane transporter low > 113
Ralstonia solanacearum UW163 0.52 UW163_RS04035 4-aminobutyrate--2-oxoglutarate transaminase 0.41 UW163_RS06140 MFS transporter — —
Ralstonia solanacearum IBSBF1503 0.52 RALBFv3_RS09545 4-aminobutyrate--2-oxoglutarate transaminase 0.41 RALBFv3_RS07480 MFS transporter low > 76
Serratia liquefaciens MT49 0.52 IAI46_22165 4-aminobutyrate--2-oxoglutarate transaminase 0.57 IAI46_11675 MFS transporter low > 86
Dickeya dadantii 3937 0.52 DDA3937_RS11830 4-aminobutyrate--2-oxoglutarate transaminase 0.52 DDA3937_RS10665 MFS transporter low > 74
Dickeya dianthicola ME23 0.52 DZA65_RS12405 4-aminobutyrate--2-oxoglutarate transaminase 0.51 DZA65_RS11135 MFS transporter low > 75
Dickeya dianthicola 67-19 0.52 HGI48_RS11860 4-aminobutyrate--2-oxoglutarate transaminase 0.52 HGI48_RS10665 MFS transporter low > 71
Pantoea sp. MT58 0.51 IAI47_19475 4-aminobutyrate--2-oxoglutarate transaminase 0.56 IAI47_09740 MFS transporter low > 76
Sinorhizobium meliloti 1021 0.51 SM_b21186 4-aminobutyrate aminotransferase 0.08 SMa1959 hypothetical protein low > 103
Castellaniella sp019104865 MT123 0.51 ABCV34_RS01765 4-aminobutyrate--2-oxoglutarate transaminase 0.18 ABCV34_RS01130 MFS transporter low > 48
Shewanella loihica PV-4 0.50 Shew_3172 4-aminobutyrate aminotransferase (RefSeq) 0.23 Shew_1441 major facilitator transporter (RefSeq) low > 60
Rhizobium sp. OAE497 0.50 ABIE40_RS00145 4-aminobutyrate--2-oxoglutarate transaminase 0.41 ABIE40_RS01535 MFS transporter low > 107
Rhodopseudomonas palustris CGA009 0.50 TX73_012015 4-aminobutyrate--2-oxoglutarate transaminase 0.10 TX73_014915 MFS transporter low > 86
Rahnella sp. WP5 0.50 EX31_RS00095 4-aminobutyrate--2-oxoglutarate transaminase 0.53 EX31_RS16995 MFS transporter low > 89
Rhodanobacter denitrificans FW104-10B01 0.33 LRK54_RS04500 acetyl ornithine aminotransferase family protein 0.44 LRK54_RS16275 MFS transporter low > 59
Rhodanobacter denitrificans MT42 0.33 LRK55_RS04275 acetyl ornithine aminotransferase family protein 0.44 LRK55_RS16025 MFS transporter low > 63
Mucilaginibacter yixingensis YX-36 DSM 26809 0.24 ABZR88_RS15500 aspartate aminotransferase family protein 0.10 ABZR88_RS01375 MFS transporter — —

Not shown: 9 genomes with orthologs for Psest_3653 only; 12 genomes with orthologs for Psest_3708 only