Conservation of cofitness between PS417_03830 and PS417_15075 in Pseudomonas simiae WCS417

49 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_03830 protein disaggregation chaperone 1.0 PS417_15075 NAD-glutamate dehydrogenase 0.56 4
Pseudomonas fluorescens SBW25 0.99 PFLU_RS03880 ATP-dependent chaperone ClpB 0.99 PFLU_RS17095 NAD-glutamate dehydrogenase low > 109
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS03880 ATP-dependent chaperone ClpB 0.99 PFLU_RS17095 NAD-glutamate dehydrogenase low > 109
Pseudomonas fluorescens FW300-N2E2 0.97 Pf6N2E2_5129 ClpB protein 0.94 Pf6N2E2_634 NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large form low > 103
Pseudomonas fluorescens FW300-N2C3 0.97 AO356_15935 ATP-dependent chaperone ClpB 0.94 AO356_24705 NAD-glutamate dehydrogenase low > 104
Pseudomonas sp. RS175 0.97 PFR28_03746 Chaperone protein ClpB 0.93 PFR28_01602 NAD-specific glutamate dehydrogenase low > 88
Pseudomonas fluorescens GW456-L13 0.96 PfGW456L13_1495 ClpB protein 0.92 PfGW456L13_3298 NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large form low > 87
Pseudomonas fluorescens FW300-N1B4 0.96 Pf1N1B4_2824 ClpB protein 0.93 Pf1N1B4_4643 NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large form low > 87
Pseudomonas fluorescens FW300-N2E3 0.95 AO353_14230 ATP-dependent chaperone ClpB 0.93 AO353_22820 NAD-glutamate dehydrogenase low > 101
Pseudomonas syringae pv. syringae B728a ΔmexB 0.95 Psyr_0728 AAA ATPase, central region:Clp, N terminal:Clp, N terminal 0.89 Psyr_1724 glutamate dehydrogenase (NAD) low > 86
Pseudomonas syringae pv. syringae B728a 0.95 Psyr_0728 AAA ATPase, central region:Clp, N terminal:Clp, N terminal 0.89 Psyr_1724 glutamate dehydrogenase (NAD) low > 86
Pseudomonas putida KT2440 0.93 PP_0625 Chaperone protein ClpB 0.89 PP_2080 NAD-specific glutamate dehydrogenase 0.16 61
Pseudomonas stutzeri RCH2 0.90 Psest_0711 ATP-dependent chaperone ClpB 0.73 Psest_1944 NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large form (from data) low > 67
Pseudomonas sp. S08-1 0.89 OH686_16420 ATP-dependent chaperone protein ClpB 0.81 OH686_22265 NAD-specific glutamate dehydrogenase , large form low > 80
Marinobacter adhaerens HP15 0.75 HP15_529 protein disaggregation chaperone 0.51 HP15_2269 NAD-specific glutamate dehydrogenase low > 73
Lysobacter sp. OAE881 0.72 ABIE51_RS04925 ATP-dependent chaperone ClpB 0.40 ABIE51_RS09105 NAD-glutamate dehydrogenase domain-containing protein low > 62
Vibrio cholerae E7946 ATCC 55056 0.71 CSW01_03705 chaperone protein ClpB 0.42 CSW01_07495 NAD-glutamate dehydrogenase low > 62
Xanthomonas campestris pv. campestris strain 8004 0.71 Xcc-8004.1382.1 ClpB protein 0.40 Xcc-8004.2182.1 NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large form low > 74
Alteromonas macleodii MIT1002 0.71 MIT1002_02677 Heat shock protein F84.1 0.44 MIT1002_02034 NAD-specific glutamate dehydrogenase low > 70
Kangiella aquimarina DSM 16071 0.70 B158DRAFT_2535 ATP-dependent chaperone ClpB 0.41 B158DRAFT_0998 NAD-specific glutamate dehydrogenase low > 40
Shewanella amazonensis SB2B 0.70 Sama_2603 clpB protein (RefSeq) 0.43 Sama_1592 hypothetical protein (RefSeq) low > 62
Shewanella oneidensis MR-1 0.70 SO3577 clpB clpB protein (NCBI ptt file) 0.44 SO2593 conserved hypothetical protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.70 Shewana3_3169 ATPase (RefSeq) 0.44 Shewana3_1785 glutamate dehydrogenase (NAD) (RefSeq) low > 73
Rhodanobacter sp. FW510-T8 0.70 OKGIIK_01800 clpB ATP-dependent chaperone ClpB 0.38 OKGIIK_09160 gdh2 NAD-specific glutamate dehydrogenase low > 52
Dyella japonica UNC79MFTsu3.2 0.70 ABZR86_RS10940 ATP-dependent chaperone ClpB 0.38 ABZR86_RS07560 NAD-glutamate dehydrogenase domain-containing protein low > 74
Shewanella loihica PV-4 0.70 Shew_2948 ATPase (RefSeq) 0.44 Shew_1809 NAD-glutamate dehydrogenase (RefSeq) low > 60
Rhodanobacter denitrificans MT42 0.70 LRK55_RS04735 ATP-dependent chaperone ClpB 0.38 LRK55_RS01865 NAD-glutamate dehydrogenase low > 63
Rhodanobacter denitrificans FW104-10B01 0.69 LRK54_RS04955 ATP-dependent chaperone ClpB 0.38 LRK54_RS02090 NAD-glutamate dehydrogenase low > 59
Paraburkholderia sabiae LMG 24235 0.68 QEN71_RS22370 ATP-dependent chaperone ClpB 0.41 QEN71_RS20065 NAD-glutamate dehydrogenase low > 153
Paraburkholderia graminis OAS925 0.67 ABIE53_002033 ATP-dependent Clp protease ATP-binding subunit ClpB 0.41 ABIE53_004113 glutamate dehydrogenase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.67 H281DRAFT_00817 ATP-dependent Clp protease ATP-binding subunit ClpB 0.41 H281DRAFT_03183 glutamate dehydrogenase (NAD) low > 103
Burkholderia phytofirmans PsJN 0.67 BPHYT_RS08990 protein disaggregation chaperone 0.42 BPHYT_RS22475 NAD-glutamate dehydrogenase low > 109
Ralstonia solanacearum IBSBF1503 0.65 RALBFv3_RS00030 ATP-dependent chaperone ClpB 0.41 RALBFv3_RS20390 NAD-glutamate dehydrogenase low > 76
Ralstonia solanacearum UW163 0.65 UW163_RS13360 ATP-dependent chaperone ClpB 0.41 UW163_RS18785 NAD-glutamate dehydrogenase
Ralstonia solanacearum PSI07 0.64 RPSI07_RS17450 ATP-dependent chaperone ClpB 0.41 RPSI07_RS18780 NAD-glutamate dehydrogenase 0.60 32
Cupriavidus basilensis FW507-4G11 0.64 RR42_RS12455 protein disaggregation chaperone 0.42 RR42_RS07270 NAD-glutamate dehydrogenase low > 128
Ralstonia sp. UNC404CL21Col 0.64 ABZR87_RS11485 ATP-dependent chaperone ClpB 0.42 ABZR87_RS22605 NAD-glutamate dehydrogenase low > 80
Azospirillum sp. SherDot2 0.60 MPMX19_02442 Chaperone protein ClpB 0.40 MPMX19_04621 NAD-specific glutamate dehydrogenase low > 112
Azospirillum brasilense Sp245 0.59 AZOBR_RS18950 ATPase AAA 0.42 AZOBR_RS00190 L-glutamate dehydrogenase (NAD+) (EC 1.4.1.2) (from data) low > 97
Sphingomonas koreensis DSMZ 15582 0.58 Ga0059261_1434 ATP-dependent chaperone ClpB 0.29 Ga0059261_1252 NAD-specific glutamate dehydrogenase
Rhodospirillum rubrum S1H 0.58 Rru_A0753 Chaperone clpB (NCBI) 0.38 Rru_A3663 NAD-glutamate dehydrogenase (NCBI) low > 58
Magnetospirillum magneticum AMB-1 0.58 AMB_RS07865 ATP-dependent chaperone ClpB 0.39 AMB_RS00165 NAD-glutamate dehydrogenase low > 64
Rhizobium sp. OAE497 0.58 ABIE40_RS17260 ATP-dependent chaperone ClpB 0.32 ABIE40_RS19120 NAD-glutamate dehydrogenase low > 107
Bosea sp. OAE506 0.57 ABIE41_RS23785 ATP-dependent chaperone ClpB 0.33 ABIE41_RS04780 NAD-glutamate dehydrogenase low > 77
Agrobacterium fabrum C58 0.57 Atu4177 ATP-dependent Clp protease, ATP-binding subunit 0.32 Atu2766 NAD-glutamate dehydrogenase low > 89
Sinorhizobium meliloti 1021 0.57 SMc02433 ATP-dependent protease 0.32 SMc04085 hypothetical protein low > 103
Brevundimonas sp. GW460-12-10-14-LB2 0.57 A4249_RS11010 ATP-dependent chaperone ClpB 0.32 A4249_RS13510 NAD-glutamate dehydrogenase
Caulobacter crescentus NA1000 0.56 CCNA_00922 ClpB protein 0.33 CCNA_00086 NAD-specific glutamate dehydrogenase GdhZ
Caulobacter crescentus NA1000 Δfur 0.56 CCNA_00922 ClpB protein 0.33 CCNA_00086 NAD-specific glutamate dehydrogenase GdhZ
Mycobacterium tuberculosis H37Rv 0.54 Rv0384c Probable endopeptidase ATP binding protein (chain B) ClpB (ClpB protein) (heat shock protein F84.1) 0.30 Rv2476c Probable NAD-dependent glutamate dehydrogenase Gdh (NAD-Gdh) (NAD-dependent glutamic dehydrogenase)

Not shown: 52 genomes with orthologs for PS417_03830 only; 0 genomes with orthologs for PS417_15075 only