| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Variovorax sp. SCN45 | 1.0 | GFF4449 | | TldD protein, part of TldE/TldD proteolytic complex | 1.0 | GFF2128 | | Enoyl-CoA hydratase (EC 4.2.1.17) | 0.91 | 15 |
| Variovorax sp. OAS795 | 0.95 | ABID97_RS06335 | | metalloprotease TldD | 0.91 | ABID97_RS24805 | | enoyl-CoA hydratase | low | > 91 |
| Acidovorax sp. GW101-3H11 | 0.86 | Ac3H11_4036 | | TldD protein, part of TldE/TldD proteolytic complex | 0.87 | Ac3H11_4006 | | Enoyl-CoA hydratase (EC 4.2.1.17) | low | > 79 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.85 | GFF580 | | TldD protein, part of TldE/TldD proteolytic complex | 0.82 | GFF619 | | Enoyl-CoA hydratase (EC 4.2.1.17) | low | > 90 |
| Cupriavidus basilensis FW507-4G11 | 0.73 | RR42_RS05875 | | protease TldD | 0.74 | RR42_RS18250 | | enoyl-CoA hydratase | low | > 128 |
| Herbaspirillum seropedicae SmR1 | 0.73 | HSERO_RS07155 | | peptidase C69 | 0.69 | HSERO_RS19405 | | enoyl-CoA hydratase | low | > 78 |
| Ralstonia sp. UNC404CL21Col | 0.72 | ABZR87_RS01105 | | metalloprotease TldD | 0.68 | ABZR87_RS02095 | | enoyl-CoA hydratase | low | > 80 |
| Ralstonia solanacearum GMI1000 | 0.72 | RS_RS13315 | | metalloprotease TldD | 0.72 | RS_RS14385 | | enoyl-CoA hydratase | low | > 80 |
| Burkholderia phytofirmans PsJN | 0.72 | BPHYT_RS03540 | | peptidase C69 | 0.73 | BPHYT_RS17335 | | 2,3-dehydroadipyl-CoA hydratase / enoyl-CoA hydratase (EC 4.2.1.17) (from data) | low | > 109 |
| Ralstonia solanacearum UW163 | 0.72 | UW163_RS08170 | | metalloprotease TldD | 0.71 | UW163_RS07185 | | enoyl-CoA hydratase | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.72 | RALBFv3_RS05455 | | metalloprotease TldD | 0.71 | RALBFv3_RS06440 | | enoyl-CoA hydratase | low | > 76 |
| Ralstonia solanacearum PSI07 | 0.71 | RPSI07_RS11850 | | metalloprotease TldD | 0.72 | RPSI07_RS10800 | | enoyl-CoA hydratase | low | > 81 |
| Paraburkholderia sabiae LMG 24235 | 0.71 | QEN71_RS26555 | | metalloprotease TldD | 0.71 | QEN71_RS27495 | | enoyl-CoA hydratase | low | > 153 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.71 | H281DRAFT_04688 | | microcin-processing peptidase 2. Unknown type peptidase. MEROPS family U62 | 0.73 | H281DRAFT_05725 | | 2,3-dehydroadipyl-CoA hydratase / enoyl-CoA hydratase (EC 4.2.1.17) (from data) | low | > 103 |
| Paraburkholderia graminis OAS925 | 0.71 | ABIE53_000851 | | TldD protein | 0.71 | ABIE53_003629 | | enoyl-CoA hydratase | low | > 113 |
| Castellaniella sp019104865 MT123 | 0.70 | ABCV34_RS02590 | | metalloprotease TldD | 0.68 | ABCV34_RS10435 | | enoyl-CoA hydratase | — | — |
| Dechlorosoma suillum PS | 0.67 | Dsui_3401 | | putative Zn-dependent protease-like protein | 0.70 | Dsui_1378 | | enoyl-CoA hydratase/carnithine racemase | low | > 51 |
| Pseudomonas putida KT2440 | 0.58 | PP_0940 | | putative protease involved in Microcin B17 maturation and in sensitivity to the DNA gyrase inhibitor LetD | 0.58 | PP_2217 | | enoyl-CoA hydratase | low | > 96 |
| Lysobacter sp. OAE881 | 0.58 | ABIE51_RS06795 | | metalloprotease TldD | 0.33 | ABIE51_RS07570 | | enoyl-CoA hydratase-related protein | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.58 | Psyr_4156 | | microcin-processing peptidase 2, Unknown type peptidase, MEROPS family U62 | 0.61 | Psyr_3030 | | short chain enoyl-CoA hydratase | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.58 | Psyr_4156 | | microcin-processing peptidase 2, Unknown type peptidase, MEROPS family U62 | 0.61 | Psyr_3030 | | short chain enoyl-CoA hydratase | — | — |
| Pseudomonas fluorescens SBW25 | 0.56 | PFLU_RS04340 | | metalloprotease TldD | 0.59 | PFLU_RS14775 | | enoyl-CoA hydratase | low | > 109 |
| Pseudomonas fluorescens FW300-N2E3 | 0.56 | AO353_05215 | | protease TldD | 0.59 | AO353_25675 | | enoyl-CoA hydratase | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.56 | PFLU_RS04340 | | metalloprotease TldD | 0.59 | PFLU_RS14775 | | enoyl-CoA hydratase | low | > 109 |
| Pseudomonas simiae WCS417 | 0.56 | PS417_04285 | | protease TldD | 0.60 | PS417_13845 | | enoyl-CoA hydratase | — | — |
| Pseudomonas stutzeri RCH2 | 0.56 | Psest_3320 | | Predicted Zn-dependent proteases and their inactivated homologs | 0.59 | Psest_2437 | | Enoyl-CoA hydratase [valine degradation] (EC 4.2.1.17) (from data) | low | > 67 |
| Pseudomonas sp. RS175 | 0.56 | PFR28_00161 | | Metalloprotease TldD | 0.59 | PFR28_01884 | | putative enoyl-CoA hydratase echA8 | low | > 88 |
| Pseudomonas fluorescens FW300-N1B4 | 0.56 | Pf1N1B4_1092 | | TldD protein, part of TldE/TldD proteolytic complex | 0.59 | Pf1N1B4_4788 | | Enoyl-CoA hydratase [valine degradation] (EC 4.2.1.17) | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.55 | AO356_07095 | | protease TldD | 0.58 | AO356_26360 | | enoyl-CoA hydratase | low | > 104 |
| Enterobacter sp. TBS_079 | 0.55 | MPMX20_04151 | | Metalloprotease TldD | 0.42 | MPMX20_02147 | | 2,3-dehydroadipyl-CoA hydratase | 0.25 | 57 |
| Pseudomonas fluorescens FW300-N2E2 | 0.55 | Pf6N2E2_3280 | | TldD protein, part of TldE/TldD proteolytic complex | 0.58 | Pf6N2E2_1147 | | Enoyl-CoA hydratase [valine degradation] (EC 4.2.1.17) | low | > 103 |
| Pseudomonas fluorescens GW456-L13 | 0.55 | PfGW456L13_5026 | | TldD protein, part of TldE/TldD proteolytic complex | 0.59 | PfGW456L13_2984 | | Enoyl-CoA hydratase [valine degradation] (EC 4.2.1.17) | low | > 87 |
| Klebsiella michiganensis M5al | 0.55 | BWI76_RS25470 | | metalloprotease TldD | 0.42 | BWI76_RS13115 | | 2,3-dehydroadipyl-CoA hydratase | — | — |
| Escherichia coli ECOR27 | 0.55 | NOLOHH_09555 | tldD | metalloprotease TldD | 0.42 | NOLOHH_19465 | paaF | 2,3-dehydroadipyl-CoA hydratase | low | > 75 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.55 | OHPLBJKB_00460 | | Metalloprotease TldD | 0.41 | OHPLBJKB_02318 | | 2,3-dehydroadipyl-CoA hydratase | low | > 73 |
| Escherichia coli BW25113 | 0.55 | b3244 | tldD | predicted peptidase (NCBI) | 0.41 | b1393 | paaF | enoyl-CoA hydratase-isomerase (NCBI) | — | — |
| Escherichia coli ECRC62 | 0.55 | BNILDI_01980 | tldD | metalloprotease TldD | 0.42 | BNILDI_17920 | paaF | 2,3-dehydroadipyl-CoA hydratase | low | > 75 |
| Enterobacter asburiae PDN3 | 0.54 | EX28DRAFT_3295 | | Predicted Zn-dependent proteases and their inactivated homologs | 0.43 | EX28DRAFT_1415 | | Enoyl-CoA hydratase/carnithine racemase | low | > 76 |
| Magnetospirillum magneticum AMB-1 | 0.54 | AMB_RS21030 | | metalloprotease TldD | 0.67 | AMB_RS03265 | | enoyl-CoA hydratase | low | > 64 |
| Rahnella sp. WP5 | 0.54 | EX31_RS12265 | | metalloprotease TldD | 0.35 | EX31_RS16680 | | enoyl-CoA hydratase | low | > 89 |
| Rhodospirillum rubrum S1H | 0.54 | Rru_A0567 | | Peptidase U62, modulator of DNA gyrase (NCBI) | 0.63 | Rru_A3801 | | Enoyl-CoA hydratase/isomerase (NCBI) | low | > 58 |
| Sphingomonas koreensis DSMZ 15582 | 0.54 | Ga0059261_2252 | | Predicted Zn-dependent proteases and their inactivated homologs | 0.58 | Ga0059261_3685 | | Enoyl-CoA hydratase/carnithine racemase | low | > 68 |
| Azospirillum brasilense Sp245 | 0.52 | AZOBR_RS10600 | | peptidase C69 | 0.65 | AZOBR_RS01260 | | enoyl-CoA hydratase | low | > 97 |
| Azospirillum sp. SherDot2 | 0.52 | MPMX19_00882 | | Metalloprotease TldD | 0.65 | MPMX19_02766 | | putative enoyl-CoA hydratase echA8 | low | > 112 |
| Rhizobium sp. OAE497 | 0.51 | ABIE40_RS04050 | | metalloprotease TldD | 0.66 | ABIE40_RS01595 | | enoyl-CoA hydratase | low | > 107 |
| Caulobacter crescentus NA1000 Δfur | 0.51 | CCNA_03522 | | Zn-dependent protease TldD | 0.55 | CCNA_00006 | | enoyl-CoA hydratase | low | > 67 |
| Caulobacter crescentus NA1000 | 0.51 | CCNA_03522 | | Zn-dependent protease TldD | 0.55 | CCNA_00006 | | enoyl-CoA hydratase | low | > 66 |
| Agrobacterium fabrum C58 | 0.50 | Atu0765 | | TldD | 0.62 | Atu0322 | | enoyl CoA hydratase | low | > 89 |
| Sinorhizobium meliloti 1021 | 0.50 | SMc00960 | | hypothetical protein | 0.63 | SMc01153 | | enoyl-CoA hydratase | low | > 103 |
| Rhodopseudomonas palustris CGA009 | 0.50 | TX73_004255 | | metalloprotease TldD | 0.61 | TX73_003370 | | enoyl-CoA hydratase-related protein | low | > 86 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.49 | A4249_RS10860 | | metalloprotease TldD | 0.58 | A4249_RS14515 | | enoyl-CoA hydratase-related protein | low | > 48 |
| Phaeobacter inhibens DSM 17395 | 0.49 | PGA1_c06240 | | protein TldD | 0.59 | PGA1_c36500 | | enoyl-CoA hydratase/isomerase | — | — |
| Dinoroseobacter shibae DFL-12 | 0.48 | Dshi_1139 | | peptidase U62 modulator of DNA gyrase (RefSeq) | 0.59 | Dshi_3370 | | Enoyl-CoA hydratase/isomerase (RefSeq) | — | — |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.07 | CA264_16655 | | TldD protein | 0.53 | CA264_00410 | | enoyl-CoA hydratase | low | > 74 |
Not shown: 36 genomes with orthologs for GFF4449 only; 6 genomes with orthologs for GFF2128 only