| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas stutzeri RCH2 | 1.0 | Psest_3813 | | ribonuclease PH | 1.0 | Psest_1888 | | Sua5/YciO/YrdC/YwlC family protein | 0.23 | 13 |
| Pseudomonas syringae pv. syringae B728a | 0.93 | Psyr_0213 | | RNAse PH | 0.78 | Psyr_3585 | | Sua5/YciO/YrdC/YwlC | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.93 | Psyr_0213 | | RNAse PH | 0.78 | Psyr_3585 | | Sua5/YciO/YrdC/YwlC | low | > 86 |
| Pseudomonas fluorescens FW300-N2E2 | 0.93 | Pf6N2E2_4365 | | Ribonuclease PH (EC 2.7.7.56) | 0.82 | Pf6N2E2_5626 | | Hypothetical YciO protein, TsaC/YrdC paralog | low | > 103 |
| Pseudomonas sp. S08-1 | 0.93 | OH686_13570 | | ribonuclease PH | 0.86 | OH686_20800 | | tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family | low | > 80 |
| Pseudomonas fluorescens FW300-N1B4 | 0.92 | Pf1N1B4_2117 | | Ribonuclease PH (EC 2.7.7.56) | 0.84 | Pf1N1B4_3552 | | Hypothetical YciO protein, TsaC/YrdC paralog | low | > 87 |
| Pseudomonas fluorescens FW300-N2C3 | 0.92 | AO356_12500 | | ribonuclease PH | 0.82 | AO356_18500 | | hypothetical protein | low | > 104 |
| Pseudomonas simiae WCS417 | 0.92 | PS417_27810 | | ribonuclease PH | 0.82 | PS417_22270 | | hypothetical protein | low | > 88 |
| Pseudomonas fluorescens SBW25 | 0.92 | PFLU_RS29490 | | ribonuclease PH | 0.82 | PFLU_RS23910 | | threonylcarbamoyl-AMP synthase | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.92 | PFLU_RS29490 | | ribonuclease PH | 0.82 | PFLU_RS23910 | | threonylcarbamoyl-AMP synthase | low | > 109 |
| Pseudomonas fluorescens GW456-L13 | 0.91 | PfGW456L13_784 | | Ribonuclease PH (EC 2.7.7.56) | 0.83 | PfGW456L13_4404 | | Hypothetical YciO protein, TsaC/YrdC paralog | low | > 87 |
| Pseudomonas sp. RS175 | 0.91 | PFR28_04420 | | Ribonuclease PH | 0.83 | PFR28_03318 | | putative protein YciO | low | > 88 |
| Pseudomonas fluorescens FW300-N2E3 | 0.91 | AO353_09260 | | ribonuclease PH | 0.83 | AO353_18525 | | hypothetical protein | low | > 101 |
| Pseudomonas putida KT2440 | 0.90 | PP_5294 | | Ribonuclease PH | 0.76 | PP_4499 | | putative maturation enzyme | low | > 96 |
| Marinobacter adhaerens HP15 | 0.72 | HP15_300 | | ribonuclease PH | 0.70 | HP15_1188 | | Sua5/YciO/YrdC/YwlC family protein | low | > 73 |
| Kangiella aquimarina DSM 16071 | 0.71 | B158DRAFT_0588 | | ribonuclease PH | 0.60 | B158DRAFT_2305 | | translation factor SUA5 | low | > 40 |
| Alteromonas macleodii MIT1002 | 0.70 | MIT1002_04071 | | Ribonuclease PH | 0.64 | MIT1002_01432 | | t(6)A37 threonylcarbamoyladenosine biosynthesis protein RimN | low | > 70 |
| Dickeya dadantii 3937 | 0.69 | DDA3937_RS20540 | | ribonuclease PH | 0.61 | DDA3937_RS10495 | | threonylcarbamoyl-AMP synthase | low | > 74 |
| Dickeya dianthicola ME23 | 0.69 | DZA65_RS00730 | | ribonuclease PH | 0.61 | DZA65_RS10975 | | threonylcarbamoyl-AMP synthase | low | > 75 |
| Dickeya dianthicola 67-19 | 0.69 | HGI48_RS00675 | | ribonuclease PH | 0.61 | HGI48_RS10495 | | threonylcarbamoyl-AMP synthase | low | > 71 |
| Shewanella loihica PV-4 | 0.68 | Shew_3488 | | ribonuclease PH (RefSeq) | 0.54 | Shew_2249 | | Sua5/YciO/YrdC/YwlC family protein (RefSeq) | low | > 60 |
| Serratia liquefaciens MT49 | 0.67 | IAI46_24850 | | ribonuclease PH | 0.64 | IAI46_14010 | | threonylcarbamoyl-AMP synthase | low | > 86 |
| Shewanella oneidensis MR-1 | 0.67 | SO4256 | rph | ribonuclease PH (NCBI ptt file) | 0.54 | SO3016 | | Sua5/YciO/YrdC/YwlC family protein (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.67 | Shewana3_3777 | | RNAse PH (RefSeq) | 0.54 | Shewana3_1522 | | translation factor SUA5 (RefSeq) | low | > 73 |
| Shewanella amazonensis SB2B | 0.67 | Sama_0320 | | tRNA nucleotidyltransferase (RefSeq) | 0.60 | Sama_2127 | | Sua5/YciO/YrdC/YwlC family protein (RefSeq) | low | > 62 |
| Burkholderia phytofirmans PsJN | 0.67 | BPHYT_RS15325 | | ribonuclease PH | 0.56 | BPHYT_RS12635 | | translation factor Sua5 | low | > 109 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.66 | GFF366 | | Ribonuclease PH (EC 2.7.7.56) | 0.63 | GFF2720 | | Hypothetical YciO protein, TsaC/YrdC paralog | low | > 78 |
| Rahnella sp. WP5 | 0.66 | EX31_RS14505 | | ribonuclease PH | 0.64 | EX31_RS09945 | | threonylcarbamoyl-AMP synthase | low | > 89 |
| Paraburkholderia graminis OAS925 | 0.66 | ABIE53_003234 | | ribonuclease PH | 0.57 | ABIE53_002753 | | tRNA threonylcarbamoyl adenosine modification protein (Sua5/YciO/YrdC/YwlC family) | low | > 113 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.66 | H281DRAFT_04008 | | RNAse PH | 0.57 | H281DRAFT_00505 | | tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family | low | > 103 |
| Escherichia coli ECRC101 | 0.66 | MCAODC_06100 | rph | ribonuclease PH | 0.66 | MCAODC_15625 | yciO | L-threonylcarbamoyladenylate synthase | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.66 | QEN71_RS03645 | | ribonuclease PH | 0.57 | QEN71_RS05920 | | L-threonylcarbamoyladenylate synthase | low | > 153 |
| Escherichia coli ECRC98 | 0.66 | JDDGAC_19215 | rph | ribonuclease PH | 0.66 | JDDGAC_05185 | yciO | L-threonylcarbamoyladenylate synthase | — | — |
| Escherichia coli ECRC99 | 0.66 | KEDOAH_12555 | rph | ribonuclease PH | 0.66 | KEDOAH_26110 | yciO | L-threonylcarbamoyladenylate synthase | — | — |
| Escherichia fergusonii Becca | 0.66 | EFB2_00170 | | Ribonuclease PH | 0.66 | EFB2_02660 | | putative protein YciO | low | > 86 |
| Escherichia coli ECOR27 | 0.66 | NOLOHH_07470 | rph | ribonuclease PH | 0.66 | NOLOHH_20300 | yciO | L-threonylcarbamoyladenylate synthase | — | — |
| Escherichia coli Nissle 1917 | 0.66 | ECOLIN_RS20755 | | ribonuclease PH | 0.66 | ECOLIN_RS07625 | | L-threonylcarbamoyladenylate synthase | — | — |
| Escherichia coli ECOR38 | 0.66 | HEPCGN_14410 | rph | ribonuclease PH | 0.66 | HEPCGN_25550 | yciO | L-threonylcarbamoyladenylate synthase | low | > 85 |
| Escherichia coli ECRC102 | 0.66 | NIAGMN_13350 | rph | ribonuclease PH | 0.66 | NIAGMN_26810 | yciO | L-threonylcarbamoyladenylate synthase | — | — |
| Escherichia coli ECRC101 | 0.66 | OKFHMN_15590 | rph | ribonuclease PH | 0.66 | OKFHMN_02640 | yciO | L-threonylcarbamoyladenylate synthase | — | — |
| Enterobacter sp. TBS_079 | 0.66 | MPMX20_00092 | | Ribonuclease PH | 0.66 | MPMX20_02508 | | putative protein YciO | low | > 85 |
| Escherichia coli BL21 | 0.66 | ECD_03500 | | ribonuclease PH | 0.66 | ECD_01241 | | putative RNA binding protein | low | > 60 |
| Escherichia coli ECRC62 | 0.66 | BNILDI_04045 | rph | ribonuclease PH | 0.66 | BNILDI_18450 | yciO | L-threonylcarbamoyladenylate synthase | — | — |
| Enterobacter asburiae PDN3 | 0.66 | EX28DRAFT_3893 | | ribonuclease PH | 0.66 | EX28DRAFT_0939 | | tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family | low | > 76 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.66 | OHPLBJKB_00059 | | Ribonuclease PH | 0.66 | OHPLBJKB_02417 | | putative protein YciO | low | > 73 |
| Herbaspirillum seropedicae SmR1 | 0.66 | HSERO_RS10655 | | ribonuclease PH | 0.58 | HSERO_RS16410 | | translation factor Sua5 | low | > 78 |
| Erwinia tracheiphila SCR3 | 0.66 | LU632_RS22020 | rph | ribonuclease PH | 0.60 | LU632_RS12745 | | threonylcarbamoyl-AMP synthase | low | > 74 |
| Acinetobacter radioresistens SK82 | 0.66 | MPMX26_00040 | | Ribonuclease PH | 0.57 | MPMX26_02446 | | putative protein YciO | low | > 36 |
| Dechlorosoma suillum PS | 0.66 | Dsui_0494 | | ribonuclease PH | 0.56 | Dsui_2730 | | Sua5/YciO/YrdC/YwlC family protein | low | > 51 |
| Klebsiella michiganensis M5al | 0.65 | BWI76_RS27390 | | ribonuclease PH | 0.63 | BWI76_RS11870 | | hypothetical protein | low | > 92 |
| Escherichia coli BW25113 | 0.65 | b3643 | rph | ribonuclease PH (NCBI) | 0.66 | b1267 | yciO | orf, hypothetical protein (VIMSS) | — | — |
| Pectobacterium carotovorum WPP14 | 0.65 | HER17_RS20855 | | ribonuclease PH | 0.60 | HER17_RS10905 | | threonylcarbamoyl-AMP synthase | low | > 75 |
| Pantoea sp. MT58 | 0.65 | IAI47_00595 | | ribonuclease PH | 0.62 | IAI47_09200 | | threonylcarbamoyl-AMP synthase | low | > 76 |
| Ralstonia solanacearum PSI07 | 0.64 | RPSI07_RS13840 | | ribonuclease PH | 0.57 | RPSI07_RS18490 | | threonylcarbamoyl-AMP synthase | — | — |
| Ralstonia solanacearum UW163 | 0.64 | UW163_RS10375 | | ribonuclease PH | 0.57 | UW163_RS12340 | | threonylcarbamoyl-AMP synthase | — | — |
| Ralstonia solanacearum GMI1000 | 0.64 | RS_RS10830 | | ribonuclease PH | 0.57 | RS_RS05680 | | threonylcarbamoyl-AMP synthase | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.64 | RALBFv3_RS03345 | | ribonuclease PH | 0.57 | RALBFv3_RS14870 | | threonylcarbamoyl-AMP synthase | low | > 76 |
| Vibrio cholerae E7946 ATCC 55056 | 0.63 | CSW01_01115 | | ribonuclease PH | 0.67 | CSW01_05965 | | threonylcarbamoyl-AMP synthase | low | > 62 |
| Ralstonia sp. UNC404CL21Col | 0.63 | ABZR87_RS15255 | | ribonuclease PH | 0.57 | ABZR87_RS10525 | | L-threonylcarbamoyladenylate synthase | low | > 80 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.63 | GFF3254 | | Ribonuclease PH (EC 2.7.7.56) | 0.53 | GFF110 | | Hypothetical YciO protein, TsaC/YrdC paralog | low | > 90 |
| Variovorax sp. SCN45 | 0.61 | GFF2381 | | Ribonuclease PH (EC 2.7.7.56) | 0.48 | GFF5789 | | YciO protein, TsaC/YrdC paralog | low | > 127 |
| Variovorax sp. OAS795 | 0.61 | ABID97_RS23640 | | ribonuclease PH | 0.48 | ABID97_RS22605 | | L-threonylcarbamoyladenylate synthase | low | > 91 |
| Cupriavidus basilensis FW507-4G11 | 0.60 | RR42_RS04890 | | ribonuclease PH | 0.55 | RR42_RS06230 | | hypothetical protein | low | > 128 |
| Castellaniella sp019104865 MT123 | 0.59 | ABCV34_RS03515 | | ribonuclease PH | 0.49 | ABCV34_RS15815 | | L-threonylcarbamoyladenylate synthase | low | > 48 |
| Acidovorax sp. GW101-3H11 | 0.58 | Ac3H11_3670 | | Ribonuclease PH (EC 2.7.7.56) | 0.51 | Ac3H11_1753 | | TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA | low | > 79 |
| Synechococcus elongatus PCC 7942 | 0.51 | Synpcc7942_1073 | rph | ribonuclease PH | 0.38 | Synpcc7942_2350 | | translation factor SUA5 | low | > 38 |
Not shown: 23 genomes with orthologs for Psest_3813 only; 13 genomes with orthologs for Psest_1888 only