Conservation of cofitness between GFF2454 and GFF1631 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

66 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF2454 Nitrogen regulatory protein P-II 1.0 GFF1631 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) 0.92 7
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01154 Nitrogen regulatory protein P-II 1 0.97 OHPLBJKB_01877 Glucose-6-phosphate 1-dehydrogenase low > 73
Escherichia coli ECRC100 1.00 OKFHMN_21500 glnB nitrogen regulatory protein P-II 0.97 OKFHMN_26335 zwf glucose-6-phosphate dehydrogenase low > 80
Escherichia coli ECRC102 1.00 NIAGMN_19270 glnB nitrogen regulatory protein P-II 0.97 NIAGMN_01725 zwf glucose-6-phosphate dehydrogenase — —
Escherichia coli ECRC101 1.00 MCAODC_12030 glnB nitrogen regulatory protein P-II 0.97 MCAODC_19070 zwf glucose-6-phosphate dehydrogenase low > 87
Escherichia coli ECRC99 1.00 KEDOAH_06720 glnB nitrogen regulatory protein P-II 0.97 KEDOAH_01770 zwf glucose-6-phosphate dehydrogenase — —
Escherichia coli ECOR38 1.00 HEPCGN_20645 glnB nitrogen regulatory protein P-II 0.97 HEPCGN_04740 zwf glucose-6-phosphate dehydrogenase low > 87
Escherichia coli ECRC98 1.00 JDDGAC_25165 glnB nitrogen regulatory protein P-II 0.97 JDDGAC_00910 zwf glucose-6-phosphate dehydrogenase low > 86
Escherichia coli ECRC62 1.00 BNILDI_11975 glnB nitrogen regulatory protein P-II 0.97 BNILDI_15640 zwf glucose-6-phosphate dehydrogenase low > 75
Escherichia coli BL21 1.00 ECD_02445 regulatory protein P-II for glutamine synthetase 0.97 ECD_01823 glucose-6-phosphate 1-dehydrogenase — —
Escherichia fergusonii Becca 1.00 EFB2_01343 Nitrogen regulatory protein P-II 1 0.97 EFB2_02091 Glucose-6-phosphate 1-dehydrogenase low > 86
Escherichia coli Nissle 1917 1.00 ECOLIN_RS14450 nitrogen regulatory protein P-II 0.97 ECOLIN_RS10315 glucose-6-phosphate dehydrogenase — —
Escherichia coli ECOR27 1.00 NOLOHH_13175 glnB nitrogen regulatory protein P-II 0.97 NOLOHH_16845 zwf glucose-6-phosphate dehydrogenase low > 75
Escherichia coli BW25113 1.00 b2553 glnB regulatory protein P-II for glutamine synthetase (NCBI) 0.97 b1852 zwf glucose-6-phosphate 1-dehydrogenase (NCBI) — —
Enterobacter sp. TBS_079 0.99 MPMX20_03422 Nitrogen regulatory protein P-II 0.96 MPMX20_02757 Glucose-6-phosphate 1-dehydrogenase low > 85
Enterobacter asburiae PDN3 0.99 EX28DRAFT_0097 nitrogen regulatory protein P-II family 0.96 EX28DRAFT_0704 glucose-6-phosphate 1-dehydrogenase — —
Klebsiella michiganensis M5al 0.99 BWI76_RS21245 nitrogen regulatory protein P-II 0.96 BWI76_RS18105 glucose-6-phosphate dehydrogenase — —
Dickeya dadantii 3937 0.97 DDA3937_RS15635 nitrogen regulatory protein P-II 0.88 DDA3937_RS10135 glucose-6-phosphate dehydrogenase low > 74
Dickeya dianthicola ME23 0.96 DZA65_RS16810 nitrogen regulatory protein P-II 0.87 DZA65_RS10580 glucose-6-phosphate dehydrogenase low > 75
Erwinia tracheiphila SCR3 0.96 LU632_RS17925 glnB nitrogen regulatory protein P-II 0.89 LU632_RS13360 zwf glucose-6-phosphate dehydrogenase low > 74
Dickeya dianthicola 67-19 0.96 HGI48_RS15730 nitrogen regulatory protein P-II 0.87 HGI48_RS10165 glucose-6-phosphate dehydrogenase low > 71
Pectobacterium carotovorum WPP14 0.95 HER17_RS05930 nitrogen regulatory protein P-II 0.88 HER17_RS11780 glucose-6-phosphate dehydrogenase low > 75
Pantoea sp. MT58 0.95 IAI47_04950 nitrogen regulatory protein P-II 0.90 IAI47_08495 glucose-6-phosphate dehydrogenase — —
Serratia liquefaciens MT49 0.95 IAI46_19450 nitrogen regulatory protein P-II 0.88 IAI46_14575 glucose-6-phosphate dehydrogenase — —
Rahnella sp. WP5 0.94 EX31_RS20610 nitrogen regulatory protein P-II 0.85 EX31_RS10630 glucose-6-phosphate dehydrogenase — —
Vibrio cholerae E7946 ATCC 55056 0.89 CSW01_11410 nitrogen regulatory protein P-II 0.37 CSW01_18625 glucose-6-phosphate dehydrogenase low > 62
Shewanella sp. ANA-3 0.85 Shewana3_3124 nitrogen regulatory protein P-II (RefSeq) 0.65 Shewana3_2151 glucose-6-phosphate 1-dehydrogenase (RefSeq) — —
Shewanella oneidensis MR-1 0.85 SO3519 glnB-2 nitrogen regulatory protein P-II 1 (NCBI ptt file) 0.65 SO2489 zwf glucose-6-phosphate 1-dehydrogenase (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.84 Sama_0935 nitrogen regulatory protein P-II (RefSeq) 0.65 Sama_1812 glucose-6-phosphate 1-dehydrogenase (RefSeq) — —
Shewanella loihica PV-4 0.83 Shew_1110 nitrogen regulatory protein P-II (RefSeq) 0.65 Shew_2048 glucose-6-phosphate 1-dehydrogenase (RefSeq) — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.82 GFF4272 Nitrogen regulatory protein P-II 0.43 GFF5493 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) low > 90
Paraburkholderia graminis OAS925 0.82 ABIE53_001346 nitrogen regulatory protein P-II 1 0.42 ABIE53_006464 glucose-6-phosphate 1-dehydrogenase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.82 H281DRAFT_00219 nitrogen regulatory protein P-II family 0.42 H281DRAFT_00165 glucose-6-phosphate 1-dehydrogenase low > 103
Burkholderia phytofirmans PsJN 0.82 BPHYT_RS05485 nitrogen regulatory protein P-II 1 0.42 BPHYT_RS05020 glucose-6-phosphate 1-dehydrogenase low > 109
Paraburkholderia sabiae LMG 24235 0.82 QEN71_RS24890 P-II family nitrogen regulator 0.43 QEN71_RS03330 glucose-6-phosphate dehydrogenase low > 153
Cupriavidus basilensis FW507-4G11 0.81 RR42_RS04300 nitrogen regulatory protein P-II 1 0.44 RR42_RS37405 glucose-6-phosphate dehydrogenase low > 128
Ralstonia solanacearum GMI1000 0.80 RS_RS11770 nitrogen regulatory protein P-II 1 0.44 RS_RS24615 glucose-6-phosphate dehydrogenase low > 80
Ralstonia sp. UNC404CL21Col 0.80 ABZR87_RS16080 P-II family nitrogen regulator 0.44 ABZR87_RS22915 glucose-6-phosphate dehydrogenase low > 80
Ralstonia solanacearum PSI07 0.80 RPSI07_RS13170 nitrogen regulatory protein P-II 1 0.44 RPSI07_RS07315 glucose-6-phosphate dehydrogenase — —
Variovorax sp. OAS795 0.80 ABID97_RS14850 P-II family nitrogen regulator 0.40 ABID97_RS07065 glucose-6-phosphate dehydrogenase low > 91
Variovorax sp. SCN45 0.80 GFF1151 Nitrogen regulatory protein P-II 0.40 GFF5261 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) low > 127
Alteromonas macleodii MIT1002 0.79 MIT1002_02726 Nitrogen regulatory protein P-II 0.62 MIT1002_02407 Glucose-6-phosphate 1-dehydrogenase low > 70
Ralstonia solanacearum UW163 0.79 UW163_RS09490 nitrogen regulatory protein P-II 1 0.44 UW163_RS17130 glucose-6-phosphate dehydrogenase — —
Ralstonia solanacearum IBSBF1503 0.79 RALBFv3_RS04180 nitrogen regulatory protein P-II 1 0.44 RALBFv3_RS16390 glucose-6-phosphate dehydrogenase low > 76
Rhodopseudomonas palustris CGA009 0.76 TX73_015385 P-II family nitrogen regulator 0.32 TX73_018845 glucose-6-phosphate dehydrogenase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.74 A4249_RS05675 P-II family nitrogen regulator 0.44 A4249_RS10725 glucose-6-phosphate dehydrogenase — —
Sphingomonas koreensis DSMZ 15582 0.74 Ga0059261_3385 nitrogen regulatory protein P-II family 0.43 Ga0059261_0352 glucose-6-phosphate 1-dehydrogenase — —
Lysobacter sp. OAE881 0.74 ABIE51_RS00145 P-II family nitrogen regulator 0.46 ABIE51_RS01620 glucose-6-phosphate dehydrogenase — —
Rhizobium sp. OAE497 0.74 ABIE40_RS09340 P-II family nitrogen regulator 0.46 ABIE40_RS03200 glucose-6-phosphate dehydrogenase — —
Caulobacter crescentus NA1000 0.73 CCNA_02046 nitrogen regulatory protein P-II 0.42 CCNA_02136 glucose-6-phosphate 1-dehydrogenase — —
Caulobacter crescentus NA1000 Δfur 0.73 CCNA_02046 nitrogen regulatory protein P-II 0.42 CCNA_02136 glucose-6-phosphate 1-dehydrogenase — —
Bosea sp. OAE506 0.73 ABIE41_RS16890 P-II family nitrogen regulator 0.43 ABIE41_RS23515 glucose-6-phosphate dehydrogenase — —
Agrobacterium fabrum C58 0.73 Atu1769 nitrogen regulatory protein PII 0.46 Atu0600 glucose-6-phosphate 1-dehydrogenase — —
Sinorhizobium meliloti 1021 0.73 SMc00947 nitrogen regulatory protein PII 0.45 SMc03070 glucose-6-phosphate 1-dehydrogenase — —
Azospirillum sp. SherDot2 0.73 MPMX19_01554 Nitrogen regulatory protein P-II 0.46 MPMX19_05119 Glucose-6-phosphate 1-dehydrogenase — —
Herbaspirillum seropedicae SmR1 0.71 HSERO_RS09460 nitrogen regulatory protein P-II 1 0.44 HSERO_RS05510 glucose-6-phosphate 1-dehydrogenase — —
Phaeobacter inhibens DSM 17395 0.69 PGA1_c29400 nitrogen regulatory protein P-II 0.38 PGA1_c27990 glucose-6-phosphate 1-dehydrogenase — —
Dinoroseobacter shibae DFL-12 0.69 Dshi_1838 nitrogen regulatory protein P-II (RefSeq) 0.41 Dshi_1684 glucose-6-phosphate 1-dehydrogenase (RefSeq) — —
Mycobacterium tuberculosis H37Rv 0.67 Rv2919c Probable nitrogen regulatory protein P-II GlnB 0.37 Rv1447c Probable glucose-6-phosphate 1-dehydrogenase Zwf2 (G6PD) low > 58
Synechococcus elongatus PCC 7942 0.65 Synpcc7942_0321 glnB nitrogen regulatory protein P-II 0.39 Synpcc7942_2334 zwf glucose-6-phosphate 1-dehydrogenase — —
Bifidobacterium breve UCC2003 0.61 BBR_RS11520 P-II family nitrogen regulator 0.38 BBR_RS11480 glucose-6-phosphate dehydrogenase — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.42 Echvi_1453 Nitrogen regulatory protein PII 0.38 Echvi_2862 glucose-6-phosphate 1-dehydrogenase low > 79
Phocaeicola dorei CL03T12C01 0.40 ABI39_RS14280 P-II family nitrogen regulator 0.34 ABI39_RS14355 glucose-6-phosphate dehydrogenase low > 72
Bacteroides stercoris CC31F 0.40 HMPREF1181_RS16020 P-II family nitrogen regulator 0.37 HMPREF1181_RS12520 glucose-6-phosphate dehydrogenase low > 56
Bacteroides ovatus ATCC 8483 0.39 BACOVA_03765 nitrogen regulatory protein P-II 0.37 BACOVA_00508 glucose-6-phosphate dehydrogenase low > 94
Phocaeicola vulgatus CL09T03C04 0.39 HMPREF1058_RS06900 P-II family nitrogen regulator 0.33 HMPREF1058_RS18030 glucose-6-phosphate dehydrogenase low > 67
Bacteroides thetaiotaomicron VPI-5482 0.39 BT0545 nitrogen regulatory protein P-II (NCBI ptt file) 0.36 BT1221 glucose-6-phosphate 1-dehydrogenase (NCBI ptt file) low > 81

Not shown: 11 genomes with orthologs for GFF2454 only; 24 genomes with orthologs for GFF1631 only