Conservation of cofitness between PS417_24715 and PS417_07620 in Pseudomonas simiae WCS417

63 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_24715 lytic transglycosylase 1.0 PS417_07620 beta-hexosaminidase 0.25 20
Pseudomonas fluorescens SBW25 0.99 PFLU_RS26645 lytic murein transglycosylase B 0.95 PFLU_RS07695 beta-N-acetylhexosaminidase low > 109
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS26645 lytic murein transglycosylase B 0.95 PFLU_RS07695 beta-N-acetylhexosaminidase low > 109
Pseudomonas lactucae CFBP13502 0.97 GEMAOFIL_05096 Membrane-bound lytic murein transglycosylase B 0.91 GEMAOFIL_01656 Beta-hexosaminidase low > 96
Pseudomonas fluorescens FW300-N2E3 0.91 AO353_06465 lytic transglycosylase 0.93 AO353_00455 beta-hexosaminidase 0.41 15
Pseudomonas fluorescens FW300-N1B4 0.91 Pf1N1B4_2694 Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) 0.91 Pf1N1B4_3912 Beta N-acetyl-glucosaminidase (EC 3.2.1.52) — —
Pseudomonas sp. DMC3 0.90 GFF3882 Membrane-bound lytic murein transglycosylase B 0.92 GFF1280 Beta-hexosaminidase low > 89
Pseudomonas fluorescens GW456-L13 0.90 PfGW456L13_1362 Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) 0.92 PfGW456L13_4031 Beta N-acetyl-glucosaminidase (EC 3.2.1.52) low > 87
Pseudomonas sp. SVBP6 0.89 COO64_RS15600 mltB lytic murein transglycosylase B 0.84 COO64_RS09445 nagZ beta-N-acetylhexosaminidase low > 93
Pseudomonas sp. RS175 0.88 PFR28_03866 Membrane-bound lytic murein transglycosylase B 0.91 PFR28_01119 Beta-hexosaminidase low > 88
Pseudomonas fluorescens FW300-N2C3 0.88 AO356_15320 lytic transglycosylase 0.89 AO356_02285 beta-hexosaminidase low > 104
Pseudomonas fluorescens FW300-N2E2 0.87 Pf6N2E2_4999 Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) 0.89 Pf6N2E2_2281 Beta N-acetyl-glucosaminidase (EC 3.2.1.52) low > 103
Pseudomonas putida KT2440 0.85 PP_4805 membrane-bound lytic murein transglycosylase B 0.85 PP_2145 beta-N-acetylglucosaminidase 0.47 36
Pseudomonas syringae pv. syringae B728a 0.85 Psyr_4363 membrane-bound lytic murein transglycosylase B 0.85 Psyr_3281 Glycoside hydrolase, family 3, N-terminal low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.85 Psyr_4363 membrane-bound lytic murein transglycosylase B 0.85 Psyr_3281 Glycoside hydrolase, family 3, N-terminal — —
Pseudomonas sp. BP01 0.84 JOY50_RS17710 mltB lytic murein transglycosylase B 0.85 JOY50_RS25085 nagZ beta-N-acetylhexosaminidase low > 84
Pseudomonas segetis P6 0.77 ACVTMO_RS05225 mltB lytic murein transglycosylase B 0.77 ACVTMO_RS14785 nagZ beta-N-acetylhexosaminidase — —
Pseudomonas aeruginosa PA14 0.76 IKLFDK_20635 lytic murein transglycosylase B 0.82 IKLFDK_15290 beta-N-acetylhexosaminidase low > 98
Pseudomonas aeruginosa PUPa3 0.76 DQ20_RS48180 mltB;go_function=glycosyltransferase lytic murein transglycosylase B 0.82 DQ20_RS33640 nagZ;go_function=hydrolase beta-N-acetylhexosaminidase 0.22 57
Pseudomonas aeruginosa MRSN321 0.76 DY961_RS12850 mltB;go_function=glycosyltransferase lytic murein transglycosylase B 0.82 DY961_RS01940 nagZ;go_function=hydrolase beta-N-acetylhexosaminidase low > 100
Pseudomonas sp. S08-1 0.74 OH686_09310 lytic murein transglycosylase B 0.81 OH686_21975 beta-N-acetylglucosaminidase low > 80
Pseudomonas stutzeri RCH2 0.72 Psest_0514 lytic murein transglycosylase B 0.74 Psest_2643 Beta-glucosidase-related glycosidases low > 67
Kangiella aquimarina DSM 16071 0.42 B158DRAFT_0081 lytic murein transglycosylase B 0.46 B158DRAFT_1585 Beta-glucosidase-related glycosidases low > 40
Serratia liquefaciens MT49 0.41 IAI46_18155 lytic murein transglycosylase B 0.43 IAI46_09900 beta-N-acetylhexosaminidase low > 87
Rhodanobacter sp000427505 FW510-R12 0.41 LRK53_RS17790 lytic murein transglycosylase B 0.37 LRK53_RS11930 beta-N-acetylhexosaminidase — —
Escherichia coli Nissle 1917 0.40 ECOLIN_RS15070 lytic murein transglycosylase B 0.42 ECOLIN_RS06390 beta-N-acetylhexosaminidase — —
Klebsiella pneumoniae MKP103 0.40 KDGMDA_02880 lytic murein transglycosylase B 0.43 KDGMDA_18760 beta-N-acetylhexosaminidase low > 95
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.40 GFF4695 Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) 0.41 GFF3390 Beta N-acetyl-glucosaminidase (EC 3.2.1.52) low > 78
Escherichia coli BL21 0.40 ECD_02551 membrane-bound lytic murein transglycosylase B 0.42 ECD_01103 beta N-acetyl-glucosaminidase low > 61
Escherichia coli BW25113 0.40 b2701 mltB membrane-bound lytic murein transglycosylase B (NCBI) 0.43 b1107 nagZ beta-hexosaminidase (NCBI) 0.26 8
Escherichia fergusonii Becca 0.40 EFB2_01223 Membrane-bound lytic murein transglycosylase B 0.42 EFB2_02868 Beta-hexosaminidase low > 86
Pectobacterium carotovorum WPP14 0.40 HER17_RS16185 lytic murein transglycosylase B 0.44 HER17_RS08725 beta-N-acetylhexosaminidase low > 75
Klebsiella michiganensis M5al 0.40 BWI76_RS22210 murein transglycosylase B 0.42 BWI76_RS11165 beta-N-acetylhexosaminidase low > 92
Enterobacter sp. TBS_079 0.40 MPMX20_03585 Membrane-bound lytic murein transglycosylase B 0.41 MPMX20_01788 Beta-hexosaminidase low > 85
Rhodanobacter denitrificans FW104-10B01 0.40 LRK54_RS06500 lytic murein transglycosylase B 0.36 LRK54_RS17010 beta-N-acetylhexosaminidase — —
Enterobacter asburiae PDN3 0.40 EX28DRAFT_2790 lytic murein transglycosylase B 0.41 EX28DRAFT_1823 Beta-glucosidase-related glycosidases low > 76
Rhodanobacter denitrificans MT42 0.40 LRK55_RS06245 lytic murein transglycosylase B 0.36 LRK55_RS16725 beta-N-acetylhexosaminidase — —
Dyella japonica UNC79MFTsu3.2 0.39 ABZR86_RS17480 lytic murein transglycosylase B 0.37 ABZR86_RS07110 beta-N-acetylhexosaminidase — —
Pantoea sp. MT58 0.39 IAI47_04275 lytic murein transglycosylase B 0.42 IAI47_11995 beta-N-acetylhexosaminidase low > 76
Pantoea agglomerans CFBP13505 P0401 0.39 PagCFBP13505_RS16695 lytic murein transglycosylase B 0.42 PagCFBP13505_RS05340 beta-N-acetylhexosaminidase low > 74
Herbaspirillum seropedicae SmR1 0.39 HSERO_RS04945 murein transglycosylase 0.44 HSERO_RS09685 beta-hexosaminidase — —
Shewanella sp. ANA-3 0.39 Shewana3_0993 lytic murein transglycosylase B (RefSeq) 0.42 Shewana3_2293 beta-hexosaminidase (RefSeq) low > 73
Rahnella sp. WP5 0.39 EX31_RS07810 lytic murein transglycosylase B 0.42 EX31_RS24500 beta-N-acetylhexosaminidase low > 89
Shewanella amazonensis SB2B 0.39 Sama_2590 lytic murein transglycosylase B (RefSeq) 0.42 Sama_1326 beta-hexosaminidase (RefSeq) low > 62
Shewanella oneidensis MR-1 0.38 SO1166 membrane-bound lytic transglycosylase, putative (NCBI ptt file) 0.42 SO2250 nagZ beta-hexosaminidase (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.38 Shew_2937 lytic murein transglycosylase B (RefSeq) 0.44 Shew_1626 beta-hexosaminidase (RefSeq) — —
Rhodanobacter sp. FW510-T8 0.38 OKGIIK_00080 mltB lytic murein transglycosylase B 0.35 OKGIIK_07830 nagZ beta-N-acetylhexosaminidase — —
Erwinia amylovora T8 0.38 OLJFJH_09565 lytic murein transglycosylase B 0.45 OLJFJH_15465 beta-N-acetylhexosaminidase low > 58
Dickeya dianthicola ME23 0.37 DZA65_RS03910 lytic murein transglycosylase B 0.41 DZA65_RS13585 beta-N-acetylhexosaminidase low > 75
Dickeya dianthicola 67-19 0.37 HGI48_RS03780 lytic murein transglycosylase B 0.41 HGI48_RS13115 beta-N-acetylhexosaminidase low > 71
Dickeya dadantii 3937 0.37 DDA3937_RS03745 lytic murein transglycosylase B 0.41 DDA3937_RS13050 beta-N-acetylhexosaminidase low > 74
Dechlorosoma suillum PS 0.37 Dsui_1972 lytic murein transglycosylase B 0.43 Dsui_2465 beta-glucosidase-like glycosyl hydrolase low > 51
Cupriavidus basilensis FW507-4G11 0.37 RR42_RS04540 lytic transglycosylase 0.42 RR42_RS14015 beta-hexosaminidase low > 128
Erwinia tracheiphila SCR3 0.36 LU632_RS15745 mltB lytic murein transglycosylase B 0.44 LU632_RS14755 nagZ beta-N-acetylhexosaminidase low > 73
Erwinia tracheiphila HP pepo 2.2 0.35 IJEDHG_01635 mltB lytic murein transglycosylase B 0.44 IJEDHG_00590 nagZ beta-N-acetylhexosaminidase low > 61
Acinetobacter baumannii LAC-4 0.33 RR41_RS05825 lytic murein transglycosylase B 0.53 RR41_RS16490 beta-N-acetylhexosaminidase low > 55
Ralstonia sp. UNC404CL21Col 0.33 ABZR87_RS09520 lytic murein transglycosylase B 0.43 ABZR87_RS10230 beta-N-acetylhexosaminidase low > 80
Burkholderia phytofirmans PsJN 0.33 BPHYT_RS14840 lytic transglycosylase 0.45 BPHYT_RS14345 beta-hexosaminidase low > 109
Ralstonia solanacearum GMI1000 0.32 RS_RS04565 lytic murein transglycosylase B 0.43 RS_RS05290 beta-N-acetylhexosaminidase low > 80
Ralstonia solanacearum PSI07 0.31 RPSI07_RS19640 lytic murein transglycosylase B 0.43 RPSI07_RS18950 beta-N-acetylhexosaminidase low > 81
Ralstonia solanacearum UW163 0.31 UW163_RS15980 lytic murein transglycosylase B 0.44 UW163_RS11975 beta-N-acetylhexosaminidase — —
Ralstonia solanacearum IBSBF1503 0.31 RALBFv3_RS13830 lytic murein transglycosylase B 0.44 RALBFv3_RS14510 beta-N-acetylhexosaminidase low > 76
Acinetobacter radioresistens SK82 0.30 MPMX26_02108 Membrane-bound lytic murein transglycosylase B 0.53 MPMX26_00420 Beta-hexosaminidase low > 36
Castellaniella sp019104865 MT123 0.26 ABCV34_RS07050 lytic murein transglycosylase B 0.40 ABCV34_RS06985 beta-N-acetylhexosaminidase low > 48

Not shown: 0 genomes with orthologs for PS417_24715 only; 31 genomes with orthologs for PS417_07620 only