Conservation of cofitness between GFF1858 and GFF1466 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

62 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF1858 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase (EC 2.6.1.-) 1.0 GFF1466 Alkylphosphonate utilization operon protein PhnA 0.56 16
Escherichia coli ECOR27 0.82 NOLOHH_14620 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.98 NOLOHH_04870 yjdM Protein YjdM low > 75
Escherichia coli ECRC62 0.82 BNILDI_13535 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.98 BNILDI_06620 yjdM Protein YjdM low > 75
Escherichia coli BL21 0.82 ECD_02179 uridine 5'-(beta-1-threo-pentapyranosyl-4-ulose diphosphate) aminotransferase, PLP-dependent 0.98 ECD_03979 zinc-ribbon family protein low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.82 OHPLBJKB_01458 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase 0.98 OHPLBJKB_03937 hypothetical protein low > 73
Escherichia coli ECOR38 0.81 HEPCGN_22210 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.98 HEPCGN_11240 yjdM Protein YjdM low > 87
Escherichia fergusonii Becca 0.81 EFB2_01603 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase 0.98 EFB2_04475 hypothetical protein low > 86
Escherichia coli ECRC101 0.81 MCAODC_14035 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.98 MCAODC_03115 yjdM Protein YjdM low > 87
Escherichia coli ECRC98 0.81 JDDGAC_26960 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.98 JDDGAC_16240 yjdM Protein YjdM low > 86
Escherichia coli ECRC102 0.81 NIAGMN_20765 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.98 NIAGMN_10450 yjdM Protein YjdM — —
Escherichia coli ECRC99 0.81 KEDOAH_05200 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.98 KEDOAH_15560 yjdM Protein YjdM — —
Escherichia coli ECRC100 0.81 OKFHMN_22995 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.98 OKFHMN_12605 yjdM Protein YjdM low > 80
Escherichia coli Nissle 1917 0.80 ECOLIN_RS13125 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.98 ECOLIN_RS23775 zinc ribbon domain-containing protein YjdM low > 55
Escherichia coli BW25113 0.80 b2253 arnB uridine 5'-(beta-1-threo-pentapyranosyl-4-ulose diphosphate) aminotransferase, PLP-dependent (RefSeq) 0.98 b4108 phnA hypothetical protein (NCBI) low > 76
Enterobacter asburiae PDN3 0.80 EX28DRAFT_4082 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 0.95 EX28DRAFT_4198 alkylphosphonate utilization operon protein PhnA low > 76
Enterobacter sp. TBS_079 0.79 MPMX20_04380 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase 0.95 MPMX20_00327 hypothetical protein low > 85
Klebsiella michiganensis M5al 0.77 BWI76_RS26485 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase 0.93 BWI76_RS02240 alkylphosphonate utilization operon protein PhnA low > 92
Erwinia tracheiphila SCR3 0.76 LU632_RS16495 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.70 LU632_RS22225 alkylphosphonate utilization protein low > 74
Dickeya dadantii 3937 0.76 DDA3937_RS21390 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.73 DDA3937_RS05305 alkylphosphonate utilization protein low > 74
Dickeya dianthicola 67-19 0.75 HGI48_RS21625 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.74 HGI48_RS05390 alkylphosphonate utilization protein low > 71
Dickeya dianthicola ME23 0.75 DZA65_RS22610 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.74 DZA65_RS05690 alkylphosphonate utilization protein — —
Pectobacterium carotovorum WPP14 0.72 HER17_RS06520 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.75 HER17_RS16190 alkylphosphonate utilization protein 0.61 19
Pantoea sp. MT58 0.71 IAI47_21625 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.72 IAI47_04280 alkylphosphonate utilization protein low > 76
Rahnella sp. WP5 0.68 EX31_RS14020 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.73 EX31_RS19010 alkylphosphonate utilization protein low > 89
Serratia liquefaciens MT49 0.68 IAI46_11015 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.91 IAI46_06020 phnA family protein low > 86
Pseudomonas fluorescens FW300-N2E3 0.67 AO353_25530 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase 0.70 AO353_14090 alkylphosphonate utilization protein low > 101
Pseudomonas syringae pv. syringae B728a 0.64 Psyr_2689 DegT/DnrJ/EryC1/StrS aminotransferase 0.73 Psyr_0863 PhnA protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.64 Psyr_2689 DegT/DnrJ/EryC1/StrS aminotransferase 0.73 Psyr_0863 PhnA protein low > 86
Cupriavidus basilensis FW507-4G11 0.38 RR42_RS15735 pyridoxal phosphate-dependent aminotransferase 0.53 RR42_RS12350 alkylphosphonate utilization protein low > 128
Rhodanobacter sp. FW510-T8 0.34 OKGIIK_10755 UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase 0.40 OKGIIK_04380 Phosphonoacetate hydrolase low > 52
Ralstonia solanacearum PSI07 0.34 RPSI07_RS17515 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.68 RPSI07_RS06075 hypothetical protein — —
Paraburkholderia bryophila 376MFSha3.1 0.32 H281DRAFT_00805 dTDP-4-amino-4,6-dideoxygalactose transaminase 0.51 H281DRAFT_05381 phosphonoacetate hydrolase — —
Ralstonia sp. UNC404CL21Col 0.32 ABZR87_RS11420 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.58 ABZR87_RS12375 zinc ribbon domain-containing protein YjdM low > 80
Ralstonia solanacearum UW163 0.32 UW163_RS13295 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.66 UW163_RS21605 alkylphosphonate utilization protein — —
Ralstonia solanacearum IBSBF1503 0.32 RALBFv3_RS15850 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.66 RALBFv3_RS17545 alkylphosphonate utilization protein — —
Burkholderia phytofirmans PsJN 0.31 BPHYT_RS08930 aminotransferase DegT 0.57 BPHYT_RS24510 alkylphosphonate utilization protein — —
Herbaspirillum seropedicae SmR1 0.31 HSERO_RS10435 aminotransferase DegT 0.63 HSERO_RS13640 hypothetical protein — —
Ralstonia solanacearum GMI1000 0.31 RS_RS06630 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.68 RS_RS23785 hypothetical protein — —
Rhodospirillum rubrum S1H 0.31 Rru_A2746 DegT/DnrJ/EryC1/StrS aminotransferase (NCBI) 0.55 Rru_A1476 PhnA protein (NCBI) low > 58
Magnetospirillum magneticum AMB-1 0.30 AMB_RS00560 DegT/DnrJ/EryC1/StrS family aminotransferase 0.62 AMB_RS18885 hypothetical protein — —
Pseudomonas fluorescens SBW25-INTG 0.30 PFLU_RS28905 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.70 PFLU_RS25385 alkylphosphonate utilization protein low > 109
Pseudomonas fluorescens SBW25 0.30 PFLU_RS28905 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.70 PFLU_RS25385 alkylphosphonate utilization protein low > 109
Pseudomonas simiae WCS417 0.30 PS417_27245 aminotransferase DegT 0.71 PS417_23570 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N1B4 0.29 Pf1N1B4_3586 DegT/DnrJ/EryC1/StrS aminotransferase 0.70 Pf1N1B4_2795 Alkylphosphonate utilization operon protein PhnA low > 87
Azospirillum brasilense Sp245 0.29 AZOBR_RS33710 putative aminotransferase 0.61 AZOBR_RS09590 putative Zn-ribbon-containing protein involved in phosphonate metabolism PhnA-like protein low > 97
Pseudomonas sp. RS175 0.28 PFR28_00919 UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase 0.67 PFR28_03774 hypothetical protein — —
Pseudomonas stutzeri RCH2 0.28 Psest_1811 UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase 0.67 Psest_0770 alkylphosphonate utilization operon protein PhnA — —
Pseudomonas fluorescens FW300-N2E2 0.28 Pf6N2E2_2610 Bacillosamine/Legionaminic acid biosynthesis aminotransferase PglE; 4-keto-6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) aminotransferase 0.70 Pf6N2E2_5098 Alkylphosphonate utilization operon protein PhnA low > 103
Marinobacter adhaerens HP15 0.27 HP15_2398 aminotransferase, DegT/DnrJ/EryC1/StrS family 0.69 HP15_843 PhnA protein — —
Pseudomonas fluorescens GW456-L13 0.27 PfGW456L13_4375 perosamine synthetase 0.70 PfGW456L13_1467 Alkylphosphonate utilization operon protein PhnA low > 87
Pontibacter actiniarum KMM 6156, DSM 19842 0.26 CA264_07955 UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase 0.58 CA264_00900 phosphonoacetate hydrolase low > 74
Dechlorosoma suillum PS 0.26 Dsui_0082 UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase 0.46 Dsui_0559 alkylphosphonate utilization operon protein PhnA — —
Shewanella loihica PV-4 0.26 Shew_1319 DegT/DnrJ/EryC1/StrS aminotransferase (RefSeq) 0.62 Shew_1931 alkylphosphonate utilization operon protein PhnA (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.26 MIT1002_01078 UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase 0.54 MIT1002_00555 putative alkylphosphonate utilization operon protein PhnA low > 70
Sphingomonas koreensis DSMZ 15582 0.23 Ga0059261_3110 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 0.37 Ga0059261_1949 Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism — —
Pseudomonas fluorescens FW300-N2C3 0.23 AO356_03400 aminotransferase DegT 0.69 AO356_15790 alkylphosphonate utilization protein low > 104
Rhodanobacter denitrificans FW104-10B01 0.22 LRK54_RS05585 DegT/DnrJ/EryC1/StrS family aminotransferase 0.43 LRK54_RS15710 alkylphosphonate utilization protein low > 59
Mucilaginibacter yixingensis YX-36 DSM 26809 0.21 ABZR88_RS08945 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.66 ABZR88_RS05120 zinc ribbon domain-containing protein YjdM low > 71
Acinetobacter radioresistens SK82 0.21 MPMX26_00061 GDP-perosamine synthase 0.68 MPMX26_00660 hypothetical protein low > 36
Dyella japonica UNC79MFTsu3.2 0.21 ABZR86_RS18520 DegT/DnrJ/EryC1/StrS family aminotransferase 0.44 ABZR86_RS00195 zinc ribbon domain-containing protein YjdM 0.31 61
Xanthomonas campestris pv. campestris strain 8004 0.21 Xcc-8004.4490.1 Lipopolysaccharide biosynthesis protein RffA 0.44 Xcc-8004.3628.1 Alkylphosphonate utilization operon protein PhnA low > 74
Rhodanobacter denitrificans MT42 0.20 LRK55_RS04940 DegT/DnrJ/EryC1/StrS family aminotransferase 0.43 LRK55_RS15460 zinc ribbon domain-containing protein YjdM low > 63
Acidovorax sp. GW101-3H11 0.17 Ac3H11_1545 Bacillosamine/Legionaminic acid biosynthesis aminotransferase PglE; 4-keto-6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) aminotransferase 0.50 Ac3H11_4421 Alkylphosphonate utilization operon protein PhnA — —

Not shown: 25 genomes with orthologs for GFF1858 only; 8 genomes with orthologs for GFF1466 only