| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 1.0 | GFF2606 | | NAD(P) transhydrogenase subunit beta (EC 1.6.1.2) | 1.0 | GFF1379 | | Threonine dehydratase biosynthetic (EC 4.3.1.19) | 0.65 | 14 |
| Ralstonia solanacearum PSI07 | 0.80 | RPSI07_RS02775 | | NAD synthetase | 0.64 | RPSI07_RS21810 | | threonine ammonia-lyase, biosynthetic | low | > 81 |
| Variovorax sp. OAS795 | 0.79 | ABID97_RS04440 | | NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta | 0.77 | ABID97_RS07000 | | threonine ammonia-lyase, biosynthetic | low | > 91 |
| Castellaniella sp019104865 MT123 | 0.75 | ABCV34_RS10180 | | NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta | 0.65 | ABCV34_RS14460 | | threonine ammonia-lyase, biosynthetic | low | > 48 |
| Ralstonia sp. UNC404CL21Col | 0.75 | ABZR87_RS01355 | | NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta | 0.62 | ABZR87_RS07360 | | threonine ammonia-lyase, biosynthetic | low | > 80 |
| Pseudomonas syringae pv. syringae B728a | 0.74 | Psyr_5018 | | NAD(P) transhydrogenase, beta subunit | 0.52 | Psyr_4846 | | L-threonine ammonia-lyase | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.74 | Psyr_5018 | | NAD(P) transhydrogenase, beta subunit | 0.52 | Psyr_4846 | | L-threonine ammonia-lyase | low | > 86 |
| Pseudomonas stutzeri RCH2 | 0.74 | Psest_4205 | | NAD/NADP transhydrogenase beta subunit | 0.54 | Psest_3866 | | threonine ammonia-lyase, biosynthetic, long form | low | > 67 |
| Cupriavidus basilensis FW507-4G11 | 0.74 | RR42_RS25230 | | NAD synthetase | 0.63 | RR42_RS02315 | | threonine dehydratase | low | > 128 |
| Ralstonia solanacearum UW163 | 0.73 | UW163_RS07840 | | NAD(P) transhydrogenase subunit beta | 0.63 | UW163_RS02190 | | threonine ammonia-lyase, biosynthetic | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.73 | RALBFv3_RS05785 | | NAD(P) transhydrogenase subunit beta | 0.63 | RALBFv3_RS11395 | | threonine ammonia-lyase, biosynthetic | low | > 76 |
| Pseudomonas fluorescens FW300-N2C3 | 0.73 | AO356_10870 | | NAD synthetase | 0.52 | AO356_10330 | | threonine dehydratase | 0.28 | 48 |
| Pseudomonas fluorescens GW456-L13 | 0.73 | PfGW456L13_2752 | | NAD(P) transhydrogenase subunit beta (EC 1.6.1.2) | 0.52 | PfGW456L13_949 | | Threonine dehydratase biosynthetic (EC 4.3.1.19) | low | > 87 |
| Pseudomonas fluorescens SBW25-INTG | 0.73 | PFLU_RS00545 | | NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta | 0.52 | PFLU_RS28665 | | threonine ammonia-lyase, biosynthetic | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.73 | PFLU_RS00545 | | NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta | 0.52 | PFLU_RS28665 | | threonine ammonia-lyase, biosynthetic | low | > 109 |
| Paraburkholderia graminis OAS925 | 0.73 | ABIE53_000814 | | NAD(P) transhydrogenase subunit beta | 0.61 | ABIE53_002293 | | threonine dehydratase | low | > 113 |
| Pseudomonas simiae WCS417 | 0.73 | PS417_00560 | | NAD synthetase | 0.52 | PS417_27010 | | threonine dehydratase | low | > 88 |
| Pseudomonas fluorescens FW300-N2E2 | 0.73 | Pf6N2E2_4040 | | NAD(P) transhydrogenase subunit beta (EC 1.6.1.2) | 0.52 | Pf6N2E2_3938 | | Threonine dehydratase biosynthetic (EC 4.3.1.19) | low | > 103 |
| Pseudomonas putida KT2440 | 0.73 | PP_0155 | | pyridine nucleotide transhydrogenase, beta subunit | 0.53 | PP_5149 | | threonine deaminase | low | > 96 |
| Pseudomonas sp. RS175 | 0.73 | PFR28_04723 | | NAD(P) transhydrogenase subunit beta | 0.52 | PFR28_04834 | | L-threonine dehydratase biosynthetic IlvA | low | > 88 |
| Pseudomonas fluorescens FW300-N2E3 | 0.73 | AO353_11080 | | NAD synthetase | 0.52 | AO353_08485 | | threonine dehydratase | 0.21 | 90 |
| Pseudomonas fluorescens FW300-N1B4 | 0.73 | Pf1N1B4_1820 | | NAD(P) transhydrogenase subunit beta (EC 1.6.1.2) | 0.52 | Pf1N1B4_2280 | | Threonine dehydratase biosynthetic (EC 4.3.1.19) | 0.24 | 38 |
| Herbaspirillum seropedicae SmR1 | 0.72 | HSERO_RS03495 | | NAD(P) transhydrogenase subunit beta | 0.65 | HSERO_RS19510 | | threonine dehydratase | low | > 78 |
| Burkholderia phytofirmans PsJN | 0.71 | BPHYT_RS03380 | | NAD(P) transhydrogenase subunit beta | 0.62 | BPHYT_RS11065 | | threonine dehydratase | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.71 | QEN71_RS26720 | | NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta | 0.62 | QEN71_RS01985 | | threonine ammonia-lyase, biosynthetic | low | > 153 |
| Ralstonia solanacearum GMI1000 | 0.71 | RS_RS13675 | | NAD(P) transhydrogenase subunit beta | 0.64 | RS_RS02225 | | threonine ammonia-lyase, biosynthetic | — | — |
| Pseudomonas sp. S08-1 | 0.69 | OH686_11935 | | NAD(P) transhydrogenase subunit beta | 0.54 | OH686_11400 | | threonine ammonia-lyase, biosynthetic | low | > 80 |
| Azospirillum sp. SherDot2 | 0.55 | MPMX19_01276 | | NAD(P) transhydrogenase subunit beta | 0.52 | MPMX19_02807 | | L-threonine dehydratase biosynthetic IlvA | low | > 112 |
| Acinetobacter radioresistens SK82 | 0.49 | MPMX26_00530 | | NAD(P) transhydrogenase subunit beta | 0.46 | MPMX26_01278 | | L-threonine dehydratase biosynthetic IlvA | low | > 36 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.49 | A4249_RS09070 | | NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta | 0.48 | A4249_RS00615 | | threonine ammonia-lyase, biosynthetic | low | > 48 |
| Shewanella oneidensis MR-1 | 0.47 | SO3741 | pntB | NAD(P) transhydrogenase, beta subunit (NCBI ptt file) | 0.49 | SO4344 | ilvA | threonine dehydratase (NCBI ptt file) | low | > 76 |
| Acidovorax sp. GW101-3H11 | 0.47 | Ac3H11_662 | | NAD(P) transhydrogenase subunit beta (EC 1.6.1.2) | 0.82 | Ac3H11_2042 | | Threonine dehydratase biosynthetic (EC 4.3.1.19) | low | > 79 |
| Shewanella amazonensis SB2B | 0.46 | Sama_2841 | pntB | pyridine nucleotide transhydrogenase (RefSeq) | 0.48 | Sama_3278 | | threonine dehydratase (RefSeq) | low | > 62 |
| Shewanella sp. ANA-3 | 0.46 | Shewana3_0853 | pntB | pyridine nucleotide transhydrogenase (RefSeq) | 0.47 | Shewana3_0359 | | threonine dehydratase (RefSeq) | low | > 73 |
| Klebsiella michiganensis M5al | 0.46 | BWI76_RS16200 | | NAD(P) transhydrogenase subunit beta | 0.47 | BWI76_RS00980 | | PLP-dependent threonine dehydratase | low | > 92 |
| Rahnella sp. WP5 | 0.46 | EX31_RS07210 | | Re/Si-specific NAD(P)(+) transhydrogenase subunit beta | 0.46 | EX31_RS15010 | | threonine ammonia-lyase, biosynthetic | low | > 89 |
| Vibrio cholerae E7946 ATCC 55056 | 0.45 | CSW01_17045 | | NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta | 0.46 | CSW01_00135 | | threonine ammonia-lyase, biosynthetic | low | > 62 |
| Enterobacter asburiae PDN3 | 0.45 | EX28DRAFT_1543 | | NAD/NADP transhydrogenase beta subunit | 0.46 | EX28DRAFT_4444 | | threonine ammonia-lyase, biosynthetic, long form | low | > 76 |
| Dickeya dianthicola ME23 | 0.45 | DZA65_RS11370 | | Re/Si-specific NAD(P)(+) transhydrogenase subunit beta | 0.47 | DZA65_RS21330 | | threonine ammonia-lyase, biosynthetic | low | > 75 |
| Escherichia coli ECRC62 | 0.45 | BNILDI_16990 | pntB | Re/Si-specific NAD(P)(+) transhydrogenase subunit beta | 0.47 | BNILDI_04755 | ilvA | threonine ammonia-lyase, biosynthetic | low | > 75 |
| Serratia liquefaciens MT49 | 0.45 | IAI46_13270 | | Re/Si-specific NAD(P)(+) transhydrogenase subunit beta | 0.48 | IAI46_24340 | | threonine ammonia-lyase, biosynthetic | low | > 86 |
| Dickeya dadantii 3937 | 0.45 | DDA3937_RS10960 | | Re/Si-specific NAD(P)(+) transhydrogenase subunit beta | 0.49 | DDA3937_RS20150 | | threonine ammonia-lyase, biosynthetic | 0.35 | 41 |
| Escherichia coli BL21 | 0.45 | ECD_01571 | | pyridine nucleotide transhydrogenase, beta subunit | 0.46 | ECD_03650 | | l-threonine dehydratase, biosynthetic; also known as threonine deaminase | low | > 61 |
| Enterobacter sp. TBS_079 | 0.45 | MPMX20_02032 | | NAD(P) transhydrogenase subunit beta | 0.46 | MPMX20_04498 | | L-threonine dehydratase biosynthetic IlvA | 0.37 | 58 |
| Escherichia coli ECRC99 | 0.45 | KEDOAH_00410 | pntB | Re/Si-specific NAD(P)(+) transhydrogenase subunit beta | 0.47 | KEDOAH_13515 | ilvA | threonine ammonia-lyase, biosynthetic | — | — |
| Escherichia coli ECRC100 | 0.45 | OKFHMN_27695 | pntB | Re/Si-specific NAD(P)(+) transhydrogenase subunit beta | 0.47 | OKFHMN_14635 | ilvA | threonine ammonia-lyase, biosynthetic | 0.75 | 46 |
| Escherichia coli Nissle 1917 | 0.45 | ECOLIN_RS08950 | | Re/Si-specific NAD(P)(+) transhydrogenase subunit beta | 0.46 | ECOLIN_RS21670 | | threonine ammonia-lyase, biosynthetic | low | > 55 |
| Dickeya dianthicola 67-19 | 0.45 | HGI48_RS10910 | | Re/Si-specific NAD(P)(+) transhydrogenase subunit beta | 0.49 | HGI48_RS20290 | | threonine ammonia-lyase, biosynthetic | low | > 71 |
| Escherichia coli ECOR38 | 0.45 | HEPCGN_06070 | pntB | Re/Si-specific NAD(P)(+) transhydrogenase subunit beta | 0.47 | HEPCGN_13345 | ilvA | threonine ammonia-lyase, biosynthetic | low | > 87 |
| Escherichia coli ECRC102 | 0.45 | NIAGMN_00380 | pntB | Re/Si-specific NAD(P)(+) transhydrogenase subunit beta | 0.47 | NIAGMN_12390 | ilvA | threonine ammonia-lyase, biosynthetic | — | — |
| Escherichia coli ECRC98 | 0.45 | JDDGAC_02285 | pntB | Re/Si-specific NAD(P)(+) transhydrogenase subunit beta | 0.47 | JDDGAC_18255 | ilvA | threonine ammonia-lyase, biosynthetic | low | > 86 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.45 | OHPLBJKB_02124 | | NAD(P) transhydrogenase subunit beta | 0.46 | OHPLBJKB_04281 | | L-threonine dehydratase biosynthetic IlvA | low | > 73 |
| Escherichia coli ECOR27 | 0.45 | NOLOHH_18200 | pntB | Re/Si-specific NAD(P)(+) transhydrogenase subunit beta | 0.47 | NOLOHH_06770 | ilvA | threonine ammonia-lyase, biosynthetic | low | > 75 |
| Escherichia coli ECRC101 | 0.45 | MCAODC_17715 | pntB | Re/Si-specific NAD(P)(+) transhydrogenase subunit beta | 0.47 | MCAODC_05140 | ilvA | threonine ammonia-lyase, biosynthetic | low | > 87 |
| Escherichia fergusonii Becca | 0.45 | EFB2_02390 | | NAD(P) transhydrogenase subunit beta | 0.46 | EFB2_04864 | | L-threonine dehydratase biosynthetic IlvA | low | > 86 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.45 | GFF1795 | | NAD(P) transhydrogenase subunit beta (EC 1.6.1.2) | 0.47 | GFF2900 | | Threonine dehydratase biosynthetic (EC 4.3.1.19) | low | > 78 |
| Escherichia coli BW25113 | 0.45 | b1602 | pntB | pyridine nucleotide transhydrogenase (NCBI) | 0.46 | b3772 | ilvA | threonine dehydratase (NCBI) | low | > 76 |
| Pectobacterium carotovorum WPP14 | 0.44 | HER17_RS10515 | | Re/Si-specific NAD(P)(+) transhydrogenase subunit beta | 0.47 | HER17_RS01080 | | threonine ammonia-lyase, biosynthetic | low | > 75 |
| Pantoea sp. MT58 | 0.44 | IAI47_09570 | | Re/Si-specific NAD(P)(+) transhydrogenase subunit beta | 0.46 | IAI47_01040 | | threonine ammonia-lyase, biosynthetic | 0.21 | 72 |
| Erwinia tracheiphila SCR3 | 0.44 | LU632_RS11430 | pntB | Re/Si-specific NAD(P)(+) transhydrogenase subunit beta | 0.46 | LU632_RS24395 | ilvA | threonine ammonia-lyase, biosynthetic | low | > 74 |
| Shewanella loihica PV-4 | 0.43 | Shew_0662 | | NAD(P) transhydrogenase, beta subunit (RefSeq) | 0.48 | Shew_0293 | | threonine dehydratase (RefSeq) | low | > 60 |
| Alteromonas macleodii MIT1002 | 0.40 | MIT1002_03907 | | NAD(P) transhydrogenase subunit beta | 0.46 | MIT1002_04040 | | L-threonine dehydratase biosynthetic IlvA | low | > 70 |
| Rhodanobacter sp. FW510-T8 | 0.34 | OKGIIK_10675 | pntB | NAD(P) transhydrogenase subunit beta | 0.55 | OKGIIK_13620 | ilvA | threonine ammonia-lyase, biosynthetic | low | > 52 |
| Rhodanobacter denitrificans FW104-10B01 | 0.33 | LRK54_RS03825 | | NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta | 0.54 | LRK54_RS10300 | | threonine ammonia-lyase, biosynthetic | low | > 59 |
| Dyella japonica UNC79MFTsu3.2 | 0.33 | ABZR86_RS22120 | | NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta | 0.58 | ABZR86_RS15925 | | threonine ammonia-lyase, biosynthetic | low | > 74 |
| Rhodanobacter denitrificans MT42 | 0.32 | LRK55_RS03575 | | NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta | 0.54 | LRK55_RS09940 | | threonine ammonia-lyase, biosynthetic | low | > 63 |
| Dechlorosoma suillum PS | 0.28 | Dsui_2937 | | NAD/NADP transhydrogenase beta subunit | 0.60 | Dsui_0728 | | threonine ammonia-lyase, biosynthetic, long form | — | — |
Not shown: 18 genomes with orthologs for GFF2606 only; 2 genomes with orthologs for GFF1379 only