| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 1.0 | GFF828 | | Hypothetical ATP-binding protein UPF0042, contains P-loop | 1.0 | GFF1263 | | Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) | 0.76 | 9 |
| Acidovorax sp. GW101-3H11 | 0.58 | Ac3H11_3459 | | Hypothetical ATP-binding protein UPF0042, contains P-loop | 0.72 | Ac3H11_4784 | | Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) | low | > 79 |
| Variovorax sp. SCN45 | 0.56 | GFF2356 | | RNase adapter protein RapZ | 0.71 | GFF2533 | | Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) | low | > 127 |
| Variovorax sp. OAS795 | 0.56 | ABID97_RS23710 | | RNase adapter RapZ | 0.69 | ABID97_RS07210 | | glycerophosphodiester phosphodiesterase | low | > 91 |
| Herbaspirillum seropedicae SmR1 | 0.45 | HSERO_RS19535 | | nucleotide-binding protein | 0.34 | HSERO_RS18050 | | glycerophosphodiester phosphodiesterase | low | > 78 |
| Castellaniella sp019104865 MT123 | 0.45 | ABCV34_RS14330 | | RNase adapter RapZ | 0.37 | ABCV34_RS03080 | | glycerophosphodiester phosphodiesterase | low | > 48 |
| Paraburkholderia sabiae LMG 24235 | 0.45 | QEN71_RS01735 | | RNase adapter RapZ | 0.45 | QEN71_RS01340 | | glycerophosphodiester phosphodiesterase | 0.54 | 21 |
| Burkholderia phytofirmans PsJN | 0.44 | BPHYT_RS02885 | | glmZ(sRNA)-inactivating NTPase | 0.41 | BPHYT_RS02485 | | membrane protein | low | > 109 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.44 | H281DRAFT_01931 | | UPF0042 nucleotide-binding protein | 0.41 | H281DRAFT_02044 | | glycerophosphoryl diester phosphodiesterase | low | > 103 |
| Ralstonia solanacearum UW163 | 0.43 | UW163_RS02435 | | RNase adapter RapZ | 0.48 | UW163_RS13035 | | glycerophosphodiester phosphodiesterase | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.43 | RALBFv3_RS11145 | | RNase adapter RapZ | 0.48 | RALBFv3_RS15575 | | glycerophosphodiester phosphodiesterase | low | > 76 |
| Ralstonia solanacearum PSI07 | 0.43 | RPSI07_RS22155 | | RNase adapter RapZ | 0.51 | RPSI07_RS17780 | | glycerophosphodiester phosphodiesterase | low | > 81 |
| Paraburkholderia graminis OAS925 | 0.43 | ABIE53_000714 | | UPF0042 nucleotide-binding protein | 0.39 | ABIE53_000641 | | glycerophosphoryl diester phosphodiesterase | low | > 113 |
| Ralstonia solanacearum GMI1000 | 0.43 | RS_RS01995 | | RNase adaptor protein RapZ | 0.48 | RS_RS06355 | | glycerophosphodiester phosphodiesterase | low | > 80 |
| Ralstonia sp. UNC404CL21Col | 0.42 | ABZR87_RS07035 | | RNase adapter RapZ | 0.49 | ABZR87_RS11105 | | glycerophosphodiester phosphodiesterase | low | > 80 |
| Cupriavidus basilensis FW507-4G11 | 0.42 | RR42_RS02060 | | nucleotide-binding protein | 0.49 | RR42_RS12950 | | membrane protein | low | > 128 |
| Vibrio cholerae E7946 ATCC 55056 | 0.42 | CSW01_12830 | | RNase adaptor protein RapZ | 0.17 | CSW01_07810 | | glycerophosphoryl diester phosphodiesterase | low | > 62 |
| Alteromonas macleodii MIT1002 | 0.42 | MIT1002_00824 | | glmZ(sRNA)-inactivating NTPase | 0.14 | MIT1002_00492 | | Glycerophosphoryl diester phosphodiesterase | low | > 70 |
| Dechlorosoma suillum PS | 0.41 | Dsui_0990 | | putative P-loop-containing kinase | 0.34 | Dsui_3366 | | glycerophosphoryl diester phosphodiesterase | low | > 51 |
| Klebsiella michiganensis M5al | 0.39 | BWI76_RS25280 | | RNase adaptor protein RapZ | 0.49 | BWI76_RS26285 | | glycerophosphodiester phosphodiesterase | low | > 92 |
| Shewanella sp. ANA-3 | 0.39 | Shewana3_0669 | | hypothetical protein (RefSeq) | 0.11 | Shewana3_0585 | | glycerophosphoryl diester phosphodiesterase (RefSeq) | 0.36 | 48 |
| Serratia liquefaciens MT49 | 0.39 | IAI46_22485 | | RNase adapter RapZ | 0.48 | IAI46_01010 | | glycerophosphodiester phosphodiesterase | low | > 86 |
| Dickeya dianthicola ME23 | 0.39 | DZA65_RS01495 | | RNase adapter RapZ | 0.47 | DZA65_RS21645 | | glycerophosphodiester phosphodiesterase | low | > 75 |
| Dickeya dianthicola 67-19 | 0.39 | HGI48_RS01430 | | RNase adapter RapZ | 0.47 | HGI48_RS20630 | | glycerophosphodiester phosphodiesterase | low | > 71 |
| Dickeya dadantii 3937 | 0.39 | DDA3937_RS01515 | | RNase adapter RapZ | 0.48 | DDA3937_RS00740 | | glycerophosphodiester phosphodiesterase | low | > 74 |
| Escherichia coli BL21 | 0.39 | ECD_03070 | | adaptor protein for GlmZ/GlmY sRNA decay, glucosamine-6-phosphate-regulated; NTPase | 0.51 | ECD_03298 | | glycerophosphodiester phosphodiesterase, cytosolic | low | > 60 |
| Rahnella sp. WP5 | 0.39 | EX31_RS12385 | | RNase adapter RapZ | 0.46 | EX31_RS14740 | | glycerophosphodiester phosphodiesterase | low | > 89 |
| Escherichia coli ECRC101 | 0.39 | OKFHMN_17925 | rapZ | RNase adapter RapZ | 0.51 | OKFHMN_16790 | ugpQ | glycerophosphodiester phosphodiesterase | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.39 | OHPLBJKB_00495 | | RNase adapter protein RapZ | 0.51 | OHPLBJKB_00254 | | Glycerophosphodiester phosphodiesterase, cytoplasmic | low | > 73 |
| Escherichia coli BW25113 | 0.39 | b3205 | yhbJ | hypothetical protein (NCBI) | 0.51 | b3449 | ugpQ | cytoplasmic glycerophosphodiester phosphodiesterase (NCBI) | low | > 76 |
| Escherichia coli Nissle 1917 | 0.39 | ECOLIN_RS18440 | | RNase adapter RapZ | 0.51 | ECOLIN_RS19725 | | glycerophosphodiester phosphodiesterase | low | > 52 |
| Escherichia coli ECRC101 | 0.39 | MCAODC_08445 | rapZ | RNase adapter RapZ | 0.51 | MCAODC_07320 | ugpQ | glycerophosphodiester phosphodiesterase | — | — |
| Escherichia coli ECOR38 | 0.39 | HEPCGN_16800 | rapZ | RNase adapter RapZ | 0.51 | HEPCGN_15610 | ugpQ | glycerophosphodiester phosphodiesterase | low | > 85 |
| Escherichia fergusonii Becca | 0.39 | EFB2_00618 | | RNase adapter protein RapZ | 0.51 | EFB2_00373 | | Glycerophosphodiester phosphodiesterase, cytoplasmic | low | > 86 |
| Escherichia coli ECRC62 | 0.39 | BNILDI_01810 | rapZ | RNase adapter RapZ | 0.51 | BNILDI_02925 | ugpQ | glycerophosphodiester phosphodiesterase | — | — |
| Escherichia coli ECRC98 | 0.39 | JDDGAC_21550 | rapZ | RNase adapter RapZ | 0.51 | JDDGAC_20420 | ugpQ | glycerophosphodiester phosphodiesterase | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.39 | GFF2949 | | Hypothetical ATP-binding protein UPF0042, contains P-loop | 0.46 | GFF559 | | Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) | low | > 78 |
| Escherichia coli ECOR27 | 0.39 | NOLOHH_09725 | rapZ | RNase adapter RapZ | 0.51 | NOLOHH_08580 | ugpQ | glycerophosphodiester phosphodiesterase | low | > 57 |
| Escherichia coli ECRC102 | 0.39 | NIAGMN_15685 | rapZ | RNase adapter RapZ | 0.51 | NIAGMN_14560 | ugpQ | glycerophosphodiester phosphodiesterase | — | — |
| Escherichia coli ECRC99 | 0.39 | KEDOAH_10225 | rapZ | RNase adapter RapZ | 0.51 | KEDOAH_11350 | ugpQ | glycerophosphodiester phosphodiesterase | — | — |
| Enterobacter sp. TBS_079 | 0.39 | MPMX20_04111 | | RNase adapter protein RapZ | 0.49 | MPMX20_04325 | | Glycerophosphodiester phosphodiesterase, cytoplasmic | low | > 85 |
| Enterobacter asburiae PDN3 | 0.39 | EX28DRAFT_3259 | | Predicted P-loop-containing kinase | 0.49 | EX28DRAFT_4281 | | Glycerophosphoryl diester phosphodiesterase | low | > 76 |
| Shewanella loihica PV-4 | 0.39 | Shew_3314 | | hypothetical protein (RefSeq) | 0.11 | Shew_0554 | | glycerophosphoryl diester phosphodiesterase (RefSeq) | — | — |
| Pectobacterium carotovorum WPP14 | 0.39 | HER17_RS20075 | | RNase adapter RapZ | 0.49 | HER17_RS00630 | | glycerophosphodiester phosphodiesterase | low | > 75 |
| Pseudomonas sp. S08-1 | 0.38 | OH686_08560 | | RNase adapter protein RapZ | 0.19 | OH686_22010 | | Glycerophosphoryl diester phosphodiesterase | low | > 80 |
| Pantoea sp. MT58 | 0.38 | IAI47_17200 | | RNase adapter RapZ | 0.48 | IAI47_01610 | | glycerophosphodiester phosphodiesterase | low | > 76 |
| Shewanella amazonensis SB2B | 0.38 | Sama_3091 | | hypothetical protein (RefSeq) | 0.12 | Sama_3037 | | glycerophosphoryl diester phosphodiesterase (RefSeq) | low | > 62 |
| Pseudomonas fluorescens SBW25 | 0.38 | PFLU_RS04385 | | RNase adapter RapZ | 0.20 | PFLU_RS07730 | | glycerophosphodiester phosphodiesterase | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.38 | PFLU_RS04385 | | RNase adapter RapZ | 0.20 | PFLU_RS07730 | | glycerophosphodiester phosphodiesterase | 0.38 | 83 |
| Pseudomonas simiae WCS417 | 0.38 | PS417_04330 | | glmZ(sRNA)-inactivating NTPase | 0.20 | PS417_07655 | | glycerophosphodiester phosphodiesterase | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.37 | Pf1N1B4_1083 | | Hypothetical ATP-binding protein UPF0042, contains P-loop | 0.21 | Pf1N1B4_3920 | | Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.37 | Pf6N2E2_3270 | | Hypothetical ATP-binding protein UPF0042, contains P-loop | 0.20 | Pf6N2E2_2273 | | Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.37 | AO356_07050 | | glmZ(sRNA)-inactivating NTPase | 0.20 | AO356_02245 | | glycerophosphodiester phosphodiesterase | low | > 104 |
| Pseudomonas fluorescens FW300-N2E3 | 0.37 | AO353_05195 | | glmZ(sRNA)-inactivating NTPase | 0.20 | AO353_00385 | | glycerophosphodiester phosphodiesterase | low | > 101 |
| Pseudomonas stutzeri RCH2 | 0.37 | Psest_3316 | | Predicted P-loop-containing kinase | 0.19 | Psest_1664 | | Glycerophosphoryl diester phosphodiesterase | low | > 67 |
| Pseudomonas putida KT2440 | 0.37 | PP_0949 | | putative ATP-binding protein UPF0042 | 0.20 | PP_2152 | | glycerophosphoryl diester phosphodiesterase | low | > 96 |
| Pseudomonas sp. RS175 | 0.36 | PFR28_00170 | | RNase adapter protein RapZ | 0.20 | PFR28_01128 | | Glycerophosphodiester phosphodiesterase, cytoplasmic | low | > 88 |
| Pseudomonas syringae pv. syringae B728a | 0.35 | Psyr_4150 | | Uncharacterized P-loop ATPase protein UPF0042 | 0.20 | Psyr_1902 | | Glycerophosphoryl diester phosphodiesterase | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.35 | Psyr_4150 | | Uncharacterized P-loop ATPase protein UPF0042 | 0.20 | Psyr_1902 | | Glycerophosphoryl diester phosphodiesterase | low | > 86 |
| Kangiella aquimarina DSM 16071 | 0.35 | B158DRAFT_2077 | | Predicted P-loop-containing kinase | 0.16 | B158DRAFT_1230 | | Glycerophosphoryl diester phosphodiesterase | low | > 40 |
| Rhodospirillum rubrum S1H | 0.32 | Rru_A3448 | | Uncharacterized P-loop ATPase protein UPF0042 (NCBI) | 0.28 | Rru_A3786 | | Glycerophosphodiester phosphodiesterase (NCBI) | — | — |
| Magnetospirillum magneticum AMB-1 | 0.31 | AMB_RS22235 | | RNase adaptor protein RapZ | 0.31 | AMB_RS02715 | | glycerophosphodiester phosphodiesterase | low | > 64 |
| Azospirillum brasilense Sp245 | 0.30 | AZOBR_RS30485 | | nucleotide-binding protein | 0.29 | AZOBR_RS01355 | | glycerophosphoryl diester phosphodiesterase | low | > 97 |
| Fusobacterium nucleatum SB010 | 0.29 | HUW76_06700 | | RNase adapter RapZ | 0.21 | HUW76_01715 | | glycerophosphodiester phosphodiesterase | low | > 35 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.26 | DVU1631 | | conserved hypothetical protein (TIGR) | 0.20 | DVU0176 | | glycerophosphoryl diester phosphodiesterase family protein (TIGR) | low | > 55 |
Not shown: 17 genomes with orthologs for GFF828 only; 2 genomes with orthologs for GFF1263 only