| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Marinobacter adhaerens HP15 | 1.0 | HP15_201 | | peptide transport system permease ABC transporter protein | 1.0 | HP15_1047 | | DNA mismatch repair protein MutS | 0.48 | 13 |
| Phaeobacter inhibens DSM 17395 | 0.64 | PGA1_262p01030 | | dipeptide transport system permease protein DppB | 0.32 | PGA1_c35000 | | DNA mismatch repair protein MutS | low | > 62 |
| Vibrio cholerae E7946 ATCC 55056 | 0.63 | CSW01_00920 | | ABC transporter permease | 0.56 | CSW01_02840 | | DNA mismatch repair protein MutS | low | > 62 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.58 | DVU0168 | | oligopeptide/dipeptide ABC transporter, permease protein (TIGR) | 0.32 | DVU1649 | mutS | DNA mismatch repair protein MutS (TIGR) | low | > 55 |
| Desulfovibrio vulgaris Miyazaki F | 0.58 | DvMF_1828 | | binding-protein-dependent transport systems inner membrane component (RefSeq) | 0.32 | DvMF_0355 | | DNA mismatch repair protein MutS (RefSeq) | low | > 51 |
| Dinoroseobacter shibae DFL-12 | 0.42 | Dshi_0881 | | binding-protein-dependent transport systems inner membrane component (RefSeq) | 0.34 | Dshi_3466 | | DNA mismatch repair protein MutS (RefSeq) | low | > 64 |
| Agrobacterium fabrum C58 | 0.41 | Atu4696 | | oligopeptide ABC transporter permease | 0.31 | Atu0345 | | DNA mismatch repair protein, MutS family | low | > 89 |
| Bosea sp. OAE506 | 0.41 | ABIE41_RS18005 | | ABC transporter permease | 0.30 | ABIE41_RS03650 | | DNA mismatch repair protein MutS | low | > 77 |
| Variovorax sp. SCN45 | 0.41 | GFF5252 | | ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) | 0.39 | GFF6634 | | DNA mismatch repair protein MutS | low | > 127 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.40 | GFF1370 | | Dipeptide transport system permease protein DppB (TC 3.A.1.5.2) | 0.41 | GFF3599 | | DNA mismatch repair protein MutS | low | > 90 |
| Variovorax sp. OAS795 | 0.40 | ABID97_RS07030 | | ABC transporter permease | 0.39 | ABID97_RS20815 | | DNA mismatch repair protein MutS | low | > 91 |
| Sinorhizobium meliloti 1021 | 0.39 | SMc02418 | | peptide transport system permease ABC transporter protein | 0.30 | SMc01125 | | DNA mismatch repair protein MutS | low | > 103 |
| Acidovorax sp. GW101-3H11 | 0.38 | Ac3H11_2047 | | Dipeptide transport system permease protein DppB (TC 3.A.1.5.2) | 0.42 | Ac3H11_3641 | | DNA mismatch repair protein MutS | 0.27 | 58 |
| Ralstonia sp. UNC404CL21Col | 0.36 | ABZR87_RS14280 | | ABC transporter permease | 0.48 | ABZR87_RS10580 | | DNA mismatch repair protein MutS | low | > 80 |
| Cupriavidus basilensis FW507-4G11 | 0.35 | RR42_RS18205 | | ABC transporter permease | 0.48 | RR42_RS06285 | | DNA mismatch repair protein MutS | low | > 128 |
| Pectobacterium carotovorum WPP14 | 0.35 | HER17_RS00110 | | ABC transporter permease | 0.58 | HER17_RS16220 | | DNA mismatch repair protein MutS | low | > 75 |
| Ralstonia solanacearum GMI1000 | 0.34 | RS_RS09505 | | ABC transporter permease | 0.47 | RS_RS05735 | | DNA mismatch repair protein MutS | low | > 80 |
| Rahnella sp. WP5 | 0.34 | EX31_RS02580 | | ABC transporter permease | 0.56 | EX31_RS07820 | | DNA mismatch repair protein MutS | low | > 89 |
| Ralstonia solanacearum PSI07 | 0.34 | RPSI07_RS10840 | | ABC transporter permease | 0.47 | RPSI07_RS18440 | | DNA mismatch repair protein MutS | low | > 81 |
| Ralstonia solanacearum IBSBF1503 | 0.34 | RALBFv3_RS02350 | | ABC transporter permease | 0.47 | RALBFv3_RS14920 | | DNA mismatch repair protein MutS | low | > 76 |
| Ralstonia solanacearum UW163 | 0.34 | UW163_RS11375 | | ABC transporter permease | 0.47 | UW163_RS12390 | | DNA mismatch repair protein MutS | — | — |
| Azospirillum brasilense Sp245 | 0.33 | AZOBR_RS31010 | | ABC transporter permease | 0.30 | AZOBR_RS02125 | | DNA mismatch repair protein MutS | low | > 97 |
| Herbaspirillum seropedicae SmR1 | 0.33 | HSERO_RS07870 | | ABC transporter permease | 0.48 | HSERO_RS16360 | | DNA mismatch repair protein MutS | low | > 78 |
| Dickeya dianthicola ME23 | 0.33 | DZA65_RS08390 | | ABC transporter permease | 0.58 | DZA65_RS05570 | | DNA mismatch repair protein MutS | low | > 75 |
| Dickeya dadantii 3937 | 0.33 | DDA3937_RS08050 | | ABC transporter permease | 0.57 | DDA3937_RS05230 | | DNA mismatch repair protein MutS | low | > 74 |
| Dickeya dianthicola 67-19 | 0.33 | HGI48_RS07795 | | ABC transporter permease | 0.58 | HGI48_RS05230 | | DNA mismatch repair protein MutS | low | > 71 |
| Burkholderia phytofirmans PsJN | 0.31 | BPHYT_RS31190 | | ABC transporter permease | 0.47 | BPHYT_RS12475 | | DNA mismatch repair protein MutS | low | > 109 |
| Paraburkholderia sabiae LMG 24235 | 0.31 | QEN71_RS28700 | | ABC transporter permease subunit | 0.48 | QEN71_RS06085 | | DNA mismatch repair protein MutS | low | > 153 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.30 | H281DRAFT_05803 | | dipeptide transport system permease protein | 0.49 | H281DRAFT_00537 | | DNA mismatch repair protein MutS | low | > 103 |
| Pseudomonas syringae pv. syringae B728a | 0.30 | Psyr_2538 | | Binding-protein-dependent transport systems inner membrane component | 0.62 | Psyr_1376 | | DNA mismatch repair protein MutS | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.30 | Psyr_2538 | | Binding-protein-dependent transport systems inner membrane component | 0.62 | Psyr_1376 | | DNA mismatch repair protein MutS | low | > 86 |
| Rhizobium sp. OAE497 | 0.29 | ABIE40_RS03350 | | ABC transporter permease subunit | 0.31 | ABIE40_RS01775 | | DNA mismatch repair protein MutS | low | > 107 |
| Rhodospirillum rubrum S1H | 0.29 | Rru_A2357 | | Binding-protein-dependent transport systems inner membrane component (NCBI) | 0.32 | Rru_A3541 | | MutS 1 protein (NCBI) | low | > 58 |
| Serratia liquefaciens MT49 | 0.29 | IAI46_00480 | | dipeptide ABC transporter permease DppB | 0.58 | IAI46_03800 | | DNA mismatch repair protein MutS | low | > 86 |
| Pantoea sp. MT58 | 0.29 | IAI47_18645 | | dipeptide ABC transporter permease DppB | 0.55 | IAI47_04240 | | DNA mismatch repair protein MutS | low | > 76 |
| Pseudomonas putida KT2440 | 0.29 | PP_0881 | | dipeptide ABC transporter - putative membrane subunit | 0.62 | PP_1626 | | DNA mismatch repair protein MutS | low | > 96 |
| Pseudomonas fluorescens FW300-N2E2 | 0.28 | Pf6N2E2_3311 | | Dipeptide transport system permease protein DppB (TC 3.A.1.5.2) | 0.61 | Pf6N2E2_3035 | | DNA mismatch repair protein MutS | low | > 103 |
| Pseudomonas sp. RS175 | 0.28 | PFR28_00127 | | Dipeptide transport system permease protein DppB | 0.61 | PFR28_00429 | | DNA mismatch repair protein MutS | low | > 88 |
| Pseudomonas fluorescens GW456-L13 | 0.28 | PfGW456L13_5055 | | Dipeptide transport system permease protein DppB (TC 3.A.1.5.2) | 0.61 | PfGW456L13_4672 | | DNA mismatch repair protein MutS | low | > 87 |
| Pseudomonas fluorescens FW300-N1B4 | 0.28 | Pf1N1B4_1124 | | Dipeptide transport system permease protein DppB (TC 3.A.1.5.2) | 0.62 | Pf1N1B4_3117 | | DNA mismatch repair protein MutS | low | > 87 |
| Pseudomonas sp. S08-1 | 0.28 | OH686_08705 | | Dipeptide ABC transporter, permease protein DppB | 0.61 | OH686_18195 | | DNA mismatch repair protein MutS | low | > 80 |
| Pseudomonas fluorescens FW300-N2C3 | 0.28 | AO356_07260 | | peptide ABC transporter permease | 0.61 | AO356_05875 | | DNA mismatch repair protein MutS | low | > 104 |
| Pseudomonas fluorescens SBW25 | 0.28 | PFLU_RS04100 | | ABC transporter permease subunit | 0.62 | PFLU_RS05765 | | DNA mismatch repair protein MutS | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.28 | PFLU_RS04100 | | ABC transporter permease subunit | 0.62 | PFLU_RS05765 | | DNA mismatch repair protein MutS | low | > 109 |
| Pseudomonas simiae WCS417 | 0.28 | PS417_04060 | | dipeptide ABC transporter, permease component (from data) | 0.62 | PS417_05680 | | DNA mismatch repair protein MutS | low | > 88 |
| Enterobacter asburiae PDN3 | 0.28 | EX28DRAFT_3026 | | ABC-type dipeptide/oligopeptide/nickel transport systems, permease components | 0.58 | EX28DRAFT_2829 | | DNA mismatch repair protein MutS | low | > 76 |
| Pseudomonas fluorescens FW300-N2E3 | 0.28 | AO353_05395 | | peptide ABC transporter permease | 0.62 | AO353_16625 | | DNA mismatch repair protein MutS | low | > 101 |
| Dechlorosoma suillum PS | 0.27 | Dsui_2237 | | ABC-type dipeptide/oligopeptide/nickel transport system, permease component | 0.49 | Dsui_2244 | | DNA mismatch repair protein MutS | low | > 51 |
| Kangiella aquimarina DSM 16071 | 0.23 | B158DRAFT_1046 | | ABC-type dipeptide/oligopeptide/nickel transport systems, permease components | 0.51 | B158DRAFT_1529 | | DNA mismatch repair protein MutS | low | > 40 |
| Alteromonas macleodii MIT1002 | 0.20 | MIT1002_01140 | | Dipeptide transport system permease protein DppB | 0.55 | MIT1002_00953 | | DNA mismatch repair protein MutS | — | — |
| Shewanella sp. ANA-3 | 0.17 | Shewana3_2651 | | binding-protein-dependent transport systems inner membrane component (RefSeq) | 0.58 | Shewana3_1125 | | DNA mismatch repair protein MutS (RefSeq) | — | — |
| Shewanella loihica PV-4 | 0.17 | Shew_2499 | | binding-protein-dependent transport systems inner membrane component (RefSeq) | 0.56 | Shew_1214 | | DNA mismatch repair protein (RefSeq) | — | — |
| Shewanella oneidensis MR-1 | 0.16 | SO1804 | sapB | peptide ABC transporter, permease protein (NCBI ptt file) | 0.57 | SO3431 | mutS | DNA mismatch repair protein MutS (NCBI ptt file) | low | > 76 |
| Shewanella amazonensis SB2B | 0.16 | Sama_1234 | | peptide ABC transporter, permease protein (RefSeq) | 0.57 | Sama_1045 | | DNA mismatch repair protein MutS (RefSeq) | 0.41 | 21 |
Not shown: 0 genomes with orthologs for HP15_201 only; 46 genomes with orthologs for HP15_1047 only