Conservation of cofitness between GFF670 and GFF1060 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

66 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF670 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 1.0 GFF1060 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) 0.65 2
Escherichia coli HS(pFamp)R (ATCC 700891) 0.87 OHPLBJKB_02939 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.91 OHPLBJKB_03669 Soluble lytic murein transglycosylase low > 73
Escherichia coli BW25113 0.87 b0774 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase (NCBI) 0.91 b4392 slt soluble lytic murein transglycosylase (VIMSS) low > 76
Escherichia coli ECOR27 0.87 NOLOHH_22775 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.91 NOLOHH_03500 sltY murein transglycosylase low > 57
Escherichia coli ECRC62 0.87 BNILDI_21045 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.91 BNILDI_08095 sltY murein transglycosylase — —
Escherichia coli ECRC101 0.86 MCAODC_25620 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.91 MCAODC_01685 sltY murein transglycosylase — —
Escherichia coli ECRC101 0.86 OKFHMN_06405 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.91 OKFHMN_11170 sltY murein transglycosylase — —
Escherichia coli ECRC102 0.86 NIAGMN_04450 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.91 NIAGMN_09020 sltY murein transglycosylase — —
Escherichia coli ECRC99 0.86 KEDOAH_21505 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.91 KEDOAH_16985 sltY murein transglycosylase — —
Escherichia coli BL21 0.86 ECD_00741 7,8-diaminopelargonic acid synthase, PLP-dependent 0.91 ECD_04268 lytic murein transglycosylase, soluble low > 60
Escherichia fergusonii Becca 0.86 EFB2_03331 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.91 EFB2_04052 Soluble lytic murein transglycosylase low > 86
Escherichia coli ECOR38 0.86 HEPCGN_01635 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.91 HEPCGN_09175 sltY murein transglycosylase low > 85
Escherichia coli ECRC98 0.86 JDDGAC_10040 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.91 JDDGAC_14765 sltY murein transglycosylase — —
Escherichia coli Nissle 1917 0.86 ECOLIN_RS04125 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.91 ECOLIN_RS25210 murein transglycosylase low > 52
Klebsiella michiganensis M5al 0.85 BWI76_RS08755 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.84 BWI76_RS04185 murein transglycosylase low > 92
Enterobacter sp. TBS_079 0.85 MPMX20_01402 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.87 MPMX20_00699 Soluble lytic murein transglycosylase low > 85
Enterobacter asburiae PDN3 0.85 EX28DRAFT_2217 adenosylmethionine-8-amino-7-oxononanoate transaminase 0.87 EX28DRAFT_3602 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) low > 76
Dickeya dadantii 3937 0.76 DDA3937_RS08505 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.59 DDA3937_RS18455 murein transglycosylase low > 74
Dickeya dianthicola 67-19 0.75 HGI48_RS08670 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.58 HGI48_RS18385 murein transglycosylase low > 71
Serratia liquefaciens MT49 0.75 IAI46_06520 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.64 IAI46_02985 murein transglycosylase low > 86
Dickeya dianthicola ME23 0.75 DZA65_RS08960 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.58 DZA65_RS19525 murein transglycosylase low > 75
Pectobacterium carotovorum WPP14 0.75 HER17_RS13465 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.62 HER17_RS02750 murein transglycosylase low > 75
Rahnella sp. WP5 0.74 EX31_RS23690 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.62 EX31_RS03985 murein transglycosylase low > 89
Erwinia tracheiphila SCR3 0.73 LU632_RS09125 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.65 LU632_RS02575 sltY murein transglycosylase — —
Pantoea sp. MT58 0.72 IAI47_13535 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.64 IAI47_16260 murein transglycosylase low > 76
Vibrio cholerae E7946 ATCC 55056 0.67 CSW01_05640 adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA 0.31 CSW01_03655 murein transglycosylase low > 62
Alteromonas macleodii MIT1002 0.64 MIT1002_01378 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.18 MIT1002_00576 Soluble lytic murein transglycosylase precursor low > 70
Acinetobacter radioresistens SK82 0.57 MPMX26_02454 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.10 MPMX26_02666 Soluble lytic murein transglycosylase low > 36
Shewanella sp. ANA-3 0.57 Shewana3_2520 aminotransferase (RefSeq) 0.22 Shewana3_2236 lytic transglycosylase, catalytic (RefSeq) — —
Shewanella oneidensis MR-1 0.56 SO2741 bioA adenosylmethionine--8-amino-7-oxononanoate aminotransferase (NCBI ptt file) 0.22 SO2040 soluble lytic murein transglycosylase, putative (NCBI ptt file) — —
Shewanella loihica PV-4 0.55 Shew_1718 adenosylmethionine-8-amino-7-oxononanoate aminotransferase (RefSeq) 0.25 Shew_2125 lytic transglycosylase, catalytic (RefSeq) — —
Shewanella amazonensis SB2B 0.51 Sama_1437 adenosylmethionine-8-amino-7-oxononanoate aminotransferase (RefSeq) 0.25 Sama_1895 soluble lytic murein transglycosylase, putative (RefSeq) — —
Dyella japonica UNC79MFTsu3.2 0.37 ABZR86_RS10225 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.17 ABZR86_RS12745 transglycosylase SLT domain-containing protein low > 74
Rhodanobacter denitrificans FW104-10B01 0.35 LRK54_RS04150 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.16 LRK54_RS07245 transglycosylase SLT domain-containing protein low > 59
Rhodanobacter denitrificans MT42 0.35 LRK55_RS03920 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.16 LRK55_RS06980 transglycosylase SLT domain-containing protein low > 63
Pseudomonas fluorescens FW300-N1B4 0.34 Pf1N1B4_2377 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 0.21 Pf1N1B4_3898 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) low > 87
Pseudomonas sp. RS175 0.34 PFR28_04208 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.21 PFR28_01106 Soluble lytic murein transglycosylase low > 88
Pseudomonas fluorescens FW300-N2E3 0.34 AO353_08045 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.22 AO353_00530 lytic transglycosylase low > 101
Pseudomonas fluorescens FW300-N2C3 0.34 AO356_13570 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.21 AO356_02350 lytic transglycosylase low > 104
Pseudomonas syringae pv. syringae B728a 0.34 Psyr_0454 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme 0.20 Psyr_3295 SLT low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.34 Psyr_0454 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme 0.20 Psyr_3295 SLT low > 86
Rhodanobacter sp. FW510-T8 0.34 OKGIIK_11015 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.15 OKGIIK_16395 Lytic transglycosylase low > 52
Pseudomonas fluorescens FW300-N2E2 0.34 Pf6N2E2_4631 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 0.21 Pf6N2E2_2294 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) low > 103
Pseudomonas sp. S08-1 0.34 OH686_10850 adenosylmethionine-8-amino-7-oxononanoate transaminase 0.23 OH686_21900 Soluble lytic murein transglycosylase 0.92 27
Pseudomonas fluorescens GW456-L13 0.33 PfGW456L13_1044 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 0.21 PfGW456L13_4045 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) low > 87
Pseudomonas putida KT2440 0.33 PP_4984 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.21 PP_2130 putative Soluble lytic transglycosylase low > 96
Pseudomonas stutzeri RCH2 0.33 Psest_0306 adenosylmethionine-8-amino-7-oxononanoate transaminase 0.22 Psest_1844 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) low > 67
Pseudomonas simiae WCS417 0.33 PS417_26540 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.22 PS417_07550 lytic transglycosylase low > 88
Pseudomonas fluorescens SBW25-INTG 0.33 PFLU_RS28195 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.21 PFLU_RS07630 transglycosylase SLT domain-containing protein low > 109
Pseudomonas fluorescens SBW25 0.33 PFLU_RS28195 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.21 PFLU_RS07630 transglycosylase SLT domain-containing protein low > 109
Kangiella aquimarina DSM 16071 0.33 B158DRAFT_0179 adenosylmethionine-8-amino-7-oxononanoate transaminase 0.16 B158DRAFT_1444 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) — —
Xanthomonas campestris pv. campestris strain 8004 0.32 Xcc-8004.1559.1 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 0.15 Xcc-8004.961.1 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) low > 74
Lysobacter sp. OAE881 0.31 ABIE51_RS05265 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.15 ABIE51_RS19070 transglycosylase SLT domain-containing protein low > 62
Variovorax sp. SCN45 0.31 GFF145 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 0.11 GFF5163 Soluble lytic murein transglycosylase (EC 4.2.2.n1) low > 127
Paraburkholderia graminis OAS925 0.30 ABIE53_000580 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.13 ABIE53_000044 soluble lytic murein transglycosylase low > 113
Hydrogenophaga sp. GW460-11-11-14-LB1 0.30 GFF3993 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 0.11 GFF1614 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) low > 90
Paraburkholderia bryophila 376MFSha3.1 0.29 H281DRAFT_02094 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.12 H281DRAFT_05816 soluble lytic murein transglycosylase low > 103
Burkholderia phytofirmans PsJN 0.29 BPHYT_RS02165 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.13 BPHYT_RS18610 lytic transglycosylase low > 109
Ralstonia solanacearum PSI07 0.29 RPSI07_RS16705 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.12 RPSI07_RS23510 lytic transglycosylase low > 81
Ralstonia sp. UNC404CL21Col 0.29 ABZR87_RS12335 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.12 ABZR87_RS04885 lytic transglycosylase domain-containing protein low > 80
Ralstonia solanacearum UW163 0.29 UW163_RS14150 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.12 UW163_RS03720 lytic transglycosylase — —
Ralstonia solanacearum IBSBF1503 0.29 RALBFv3_RS00815 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.12 RALBFv3_RS09860 lytic transglycosylase low > 76
Ralstonia solanacearum GMI1000 0.29 RS_RS07430 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.12 RS_RS00445 lytic transglycosylase low > 80
Variovorax sp. OAS795 0.29 ABID97_RS16265 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.11 ABID97_RS06595 transglycosylase SLT domain-containing protein low > 91
Paraburkholderia sabiae LMG 24235 0.28 QEN71_RS01100 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.13 QEN71_RS28635 lytic transglycosylase domain-containing protein — —
Dechlorosoma suillum PS 0.28 Dsui_2880 adenosylmethionine-8-amino-7-oxononanoate transaminase 0.11 Dsui_0683 soluble lytic murein transglycosylase-like protein low > 51
Cupriavidus basilensis FW507-4G11 0.26 RR42_RS00925 adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA 0.12 RR42_RS01405 lytic transglycosylase low > 128

Not shown: 29 genomes with orthologs for GFF670 only; 0 genomes with orthologs for GFF1060 only