| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Echinicola vietnamensis KMM 6221, DSM 17526 | 1.0 | Echvi_1243 | | glutamate synthases, NADH/NADPH, small subunit | 1.0 | Echvi_3727 | | Phosphoenolpyruvate carboxylase | 0.95 | 2 |
| Vibrio cholerae E7946 ATCC 55056 | 0.56 | CSW01_12025 | | glutamate synthase subunit beta | 0.13 | CSW01_13390 | | phosphoenolpyruvate carboxylase | low | > 62 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.56 | ABZR88_RS06910 | | glutamate synthase subunit beta | 0.41 | ABZR88_RS09465 | | phosphoenolpyruvate carboxylase | — | — |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.55 | CA265_RS08705 | | glutamate synthase | 0.42 | CA265_RS21350 | | phosphoenolpyruvate carboxylase | 0.86 | 7 |
| Ralstonia sp. UNC404CL21Col | 0.53 | ABZR87_RS02565 | | glutamate synthase subunit beta | 0.12 | ABZR87_RS16140 | | phosphoenolpyruvate carboxylase | 0.51 | 51 |
| Variovorax sp. OAS795 | 0.52 | ABID97_RS23220 | | glutamate synthase subunit beta | 0.11 | ABID97_RS08220 | | phosphoenolpyruvate carboxylase | 0.49 | 56 |
| Ralstonia solanacearum UW163 | 0.51 | UW163_RS06705 | | glutamate synthase subunit beta | 0.12 | UW163_RS09420 | | phosphoenolpyruvate carboxylase | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.51 | RALBFv3_RS06910 | | glutamate synthase subunit beta | 0.12 | RALBFv3_RS04250 | | phosphoenolpyruvate carboxylase | low | > 76 |
| Ralstonia solanacearum GMI1000 | 0.51 | RS_RS14855 | | glutamate synthase subunit beta | 0.11 | RS_RS11840 | | phosphoenolpyruvate carboxylase | low | > 80 |
| Ralstonia solanacearum PSI07 | 0.51 | RPSI07_RS10325 | | glutamate synthase subunit beta | 0.11 | RPSI07_RS13100 | | phosphoenolpyruvate carboxylase | low | > 81 |
| Acidovorax sp. GW101-3H11 | 0.50 | Ac3H11_4711 | | Glutamate synthase [NADPH] small chain (EC 1.4.1.13) | 0.13 | Ac3H11_3553 | | Phosphoenolpyruvate carboxylase (EC 4.1.1.31) | 0.72 | 11 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.50 | GFF1326 | | Glutamate synthase [NADPH] small chain (EC 1.4.1.13) | 0.10 | GFF115 | | Phosphoenolpyruvate carboxylase (EC 4.1.1.31) | low | > 90 |
| Dechlorosoma suillum PS | 0.49 | Dsui_1097 | | NADH/NADPH-dependent glutamate synthase small subunit | 0.12 | Dsui_1603 | | phosphoenolpyruvate carboxylase | — | — |
| Rhodanobacter sp. FW510-T8 | 0.49 | OKGIIK_15205 | | Glutamate synthase | 0.13 | OKGIIK_11820 | ppc | phosphoenolpyruvate carboxylase | low | > 52 |
| Variovorax sp. SCN45 | 0.49 | GFF5333 | | Glutamate synthase [NADPH] small chain (EC 1.4.1.13) | 0.11 | GFF3838 | | Phosphoenolpyruvate carboxylase (EC 4.1.1.31) | low | > 127 |
| Rhodopseudomonas palustris CGA009 | 0.48 | TX73_004595 | | glutamate synthase subunit beta | 0.12 | TX73_009115 | | phosphoenolpyruvate carboxylase | — | — |
| Herbaspirillum seropedicae SmR1 | 0.48 | HSERO_RS19590 | | dihydropyrimidine dehydrogenase subunit A | 0.10 | HSERO_RS14670 | | phosphoenolpyruvate carboxylase | 0.40 | 47 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.25 | A4249_RS16110 | | NAD(P)-dependent oxidoreductase | 0.11 | A4249_RS12510 | | phosphoenolpyruvate carboxylase | low | > 48 |
| Sphingomonas koreensis DSMZ 15582 | 0.25 | Ga0059261_1797 | | glutamate synthase small subunit family protein, proteobacterial | 0.11 | Ga0059261_2719 | | Phosphoenolpyruvate carboxylase, type 1 (EC 4.1.1.31) | 0.94 | 2 |
| Azospirillum sp. SherDot2 | 0.25 | MPMX19_02658 | | Glutamate synthase [NADPH] small chain | 0.13 | MPMX19_06050 | | Phosphoenolpyruvate carboxylase | 0.84 | 10 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.25 | Xcc-8004.43.1 | | Glutamate synthase [NADPH] small chain (EC 1.4.1.13) | 0.15 | Xcc-8004.4314.1 | | Phosphoenolpyruvate carboxylase (EC 4.1.1.31) | low | > 74 |
| Dyella japonica UNC79MFTsu3.2 | 0.24 | ABZR86_RS16800 | | FAD-dependent oxidoreductase | 0.13 | ABZR86_RS11555 | | phosphoenolpyruvate carboxylase | 0.97 | 2 |
| Lysobacter sp. OAE881 | 0.24 | ABIE51_RS01315 | | FAD-dependent oxidoreductase | 0.12 | ABIE51_RS18965 | | phosphoenolpyruvate carboxylase | 0.98 | 6 |
| Alteromonas macleodii MIT1002 | 0.24 | MIT1002_03140 | | Glutamate synthase [NADPH] small chain | 0.12 | MIT1002_03491 | | Phosphoenolpyruvate carboxylase | low | > 70 |
| Rhodanobacter denitrificans FW104-10B01 | 0.24 | LRK54_RS10965 | | FAD-dependent oxidoreductase | 0.13 | LRK54_RS12075 | | phosphoenolpyruvate carboxylase | 0.87 | 6 |
| Rhodanobacter denitrificans MT42 | 0.24 | LRK55_RS10670 | | FAD-dependent oxidoreductase | 0.13 | LRK55_RS11810 | | phosphoenolpyruvate carboxylase | low | > 63 |
| Pseudomonas fluorescens FW300-N1B4 | 0.24 | Pf1N1B4_1533 | | Glutamate synthase [NADPH] small chain (EC 1.4.1.13) | 0.12 | Pf1N1B4_3051 | | Phosphoenolpyruvate carboxylase (EC 4.1.1.31) | low | > 87 |
| Acinetobacter radioresistens SK82 | 0.24 | MPMX26_02807 | | Glutamate synthase [NADPH] small chain | 0.13 | MPMX26_03013 | | Phosphoenolpyruvate carboxylase | 0.68 | 8 |
| Pseudomonas fluorescens FW300-N2C3 | 0.24 | AO356_09370 | | glutamate synthase | 0.12 | AO356_06185 | | phosphoenolpyruvate carboxylase | low | > 104 |
| Pseudomonas fluorescens FW300-N2E3 | 0.24 | AO353_12520 | | glutamate synthase | 0.11 | AO353_16310 | | phosphoenolpyruvate carboxylase | low | > 101 |
| Pseudomonas fluorescens FW300-N2E2 | 0.24 | Pf6N2E2_3751 | | Glutamate synthase [NADPH] small chain (EC 1.4.1.13) | 0.12 | Pf6N2E2_3103 | | Phosphoenolpyruvate carboxylase (EC 4.1.1.31) | low | > 103 |
| Pseudomonas stutzeri RCH2 | 0.24 | Psest_3710 | | glutamate synthase small subunit family protein, proteobacterial | 0.11 | Psest_1557 | | Phosphoenolpyruvate carboxylase | low | > 67 |
| Pseudomonas sp. RS175 | 0.24 | PFR28_05016 | | Glutamate synthase [NADPH] small chain | 0.11 | PFR28_00368 | | Phosphoenolpyruvate carboxylase | low | > 88 |
| Pseudomonas fluorescens GW456-L13 | 0.24 | PfGW456L13_271 | | Glutamate synthase [NADPH] small chain (EC 1.4.1.13) | 0.12 | PfGW456L13_4740 | | Phosphoenolpyruvate carboxylase (EC 4.1.1.31) | low | > 87 |
| Pseudomonas fluorescens SBW25-INTG | 0.23 | PFLU_RS02050 | | NAD(P)-binding protein | 0.11 | PFLU_RS06130 | | phosphoenolpyruvate carboxylase | low | > 109 |
| Pseudomonas simiae WCS417 | 0.23 | PS417_02005 | | glutamate synthase | 0.11 | PS417_06060 | | phosphoenolpyruvate carboxylase | low | > 88 |
| Pseudomonas syringae pv. syringae B728a | 0.23 | Psyr_0412 | | glutamate synthase (NADPH) small subunit | 0.12 | Psyr_1318 | | Phosphoenolpyruvate carboxylase | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.23 | Psyr_0412 | | glutamate synthase (NADPH) small subunit | 0.12 | Psyr_1318 | | Phosphoenolpyruvate carboxylase | low | > 86 |
| Pseudomonas putida KT2440 | 0.23 | PP_5075 | | glutamate synthase (NADPH) beta subunit | 0.11 | PP_1505 | | Phosphoenolpyruvate carboxylase | low | > 96 |
| Pseudomonas fluorescens SBW25 | 0.23 | PFLU_RS02050 | | NAD(P)-binding protein | 0.11 | PFLU_RS06130 | | phosphoenolpyruvate carboxylase | low | > 109 |
| Serratia liquefaciens MT49 | 0.23 | IAI46_22350 | | glutamate synthase small subunit | 0.12 | IAI46_24525 | | phosphoenolpyruvate carboxylase | 0.72 | 33 |
| Escherichia coli ECRC98 | 0.23 | JDDGAC_21505 | gltD | glutamate synthase subunit GltD | 0.11 | JDDGAC_17220 | ppc | phosphoenolpyruvate carboxylase | — | — |
| Escherichia coli ECRC102 | 0.23 | NIAGMN_15640 | gltD | glutamate synthase subunit GltD | 0.11 | NIAGMN_11345 | ppc | phosphoenolpyruvate carboxylase | — | — |
| Escherichia coli ECRC101 | 0.23 | OKFHMN_17880 | gltD | glutamate synthase subunit GltD | 0.11 | OKFHMN_13595 | ppc | phosphoenolpyruvate carboxylase | — | — |
| Escherichia coli BL21 | 0.23 | ECD_03078 | | glutamate synthase, 4Fe-4S protein, small subunit | 0.11 | ECD_03841 | | phosphoenolpyruvate carboxylase | 0.76 | 11 |
| Shewanella loihica PV-4 | 0.23 | Shew_1031 | gltD | glutamate synthase subunit beta (RefSeq) | 0.11 | Shew_0200 | | phosphoenolpyruvate carboxylase (RefSeq) | low | > 60 |
| Escherichia fergusonii Becca | 0.23 | EFB2_00610 | | Glutamate synthase [NADPH] small chain | 0.11 | EFB2_04658 | | Phosphoenolpyruvate carboxylase | low | > 86 |
| Escherichia coli BW25113 | 0.23 | b3213 | gltD | glutamate synthase, 4Fe-4S protein, small subunit (NCBI) | 0.11 | b3956 | ppc | phosphoenolpyruvate carboxylase (NCBI) | low | > 76 |
| Escherichia coli ECRC99 | 0.23 | KEDOAH_10270 | gltD | glutamate synthase subunit GltD | 0.11 | KEDOAH_14565 | ppc | phosphoenolpyruvate carboxylase | — | — |
| Escherichia coli ECOR27 | 0.23 | NOLOHH_09680 | gltD | glutamate synthase subunit GltD | 0.11 | NOLOHH_05740 | ppc | phosphoenolpyruvate carboxylase | low | > 57 |
| Escherichia coli ECRC101 | 0.23 | MCAODC_08400 | gltD | glutamate synthase subunit GltD | 0.11 | MCAODC_04095 | ppc | phosphoenolpyruvate carboxylase | — | — |
| Escherichia coli Nissle 1917 | 0.23 | ECOLIN_RS18480 | | glutamate synthase subunit GltD | 0.11 | ECOLIN_RS22835 | | phosphoenolpyruvate carboxylase | low | > 52 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.23 | OHPLBJKB_00487 | | Glutamate synthase [NADPH] small chain | 0.11 | OHPLBJKB_04094 | | Phosphoenolpyruvate carboxylase | low | > 73 |
| Escherichia coli ECOR38 | 0.23 | HEPCGN_16755 | gltD | glutamate synthase subunit GltD | 0.11 | HEPCGN_12240 | ppc | phosphoenolpyruvate carboxylase | low | > 85 |
| Shewanella sp. ANA-3 | 0.23 | Shewana3_3051 | gltD | glutamate synthase subunit beta (RefSeq) | 0.11 | Shewana3_3906 | | phosphoenolpyruvate carboxylase (RefSeq) | low | > 73 |
| Dickeya dadantii 3937 | 0.23 | DDA3937_RS01660 | | FAD-dependent oxidoreductase | 0.12 | DDA3937_RS20360 | | phosphoenolpyruvate carboxylase | 0.97 | 6 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.23 | GFF2957 | | Glutamate synthase [NADPH] small chain (EC 1.4.1.13) | 0.11 | GFF2342 | | Phosphoenolpyruvate carboxylase (EC 4.1.1.31) | low | > 78 |
| Marinobacter adhaerens HP15 | 0.23 | HP15_483 | | oxidoreductase Fe-S binding subunit | 0.12 | HP15_795 | | phosphoenolpyruvate carboxylase | — | — |
| Pseudomonas sp. S08-1 | 0.23 | OH686_10000 | | Glutamate synthase [NADPH] small chain | 0.11 | OH686_06795 | | Phosphoenolpyruvate carboxylase | low | > 80 |
| Shewanella oneidensis MR-1 | 0.23 | SO1324 | gltD | glutamate synthase, small subunit (NCBI ptt file) | 0.11 | SO0274 | ppc | phosphoenolpyruvate carboxylase (NCBI ptt file) | 0.95 | 2 |
| Rahnella sp. WP5 | 0.23 | EX31_RS12510 | | FAD-dependent oxidoreductase | 0.12 | EX31_RS14200 | | phosphoenolpyruvate carboxylase | 0.93 | 34 |
| Shewanella amazonensis SB2B | 0.23 | Sama_0856 | gltD | glutamate synthase subunit beta (RefSeq) | 0.12 | Sama_0254 | | phosphoenolpyruvate carboxylase (RefSeq) | 0.89 | 2 |
| Dickeya dianthicola ME23 | 0.23 | DZA65_RS01630 | | FAD-dependent oxidoreductase | 0.11 | DZA65_RS00895 | | phosphoenolpyruvate carboxylase | 0.97 | 2 |
| Dickeya dianthicola 67-19 | 0.23 | HGI48_RS01555 | | glutamate synthase small subunit | 0.12 | HGI48_RS00850 | | phosphoenolpyruvate carboxylase | 0.96 | 2 |
| Erwinia tracheiphila SCR3 | 0.22 | LU632_RS21320 | | glutamate synthase small subunit | 0.11 | LU632_RS19625 | ppc | phosphoenolpyruvate carboxylase | 0.96 | 3 |
| Pectobacterium carotovorum WPP14 | 0.22 | HER17_RS19915 | | glutamate synthase small subunit | 0.12 | HER17_RS20655 | | phosphoenolpyruvate carboxylase | low | > 75 |
| Caulobacter crescentus NA1000 | 0.21 | CCNA_03721 | | glutamate synthase (NADPH) small chain GltD | 0.08 | CCNA_01560 | | phosphoenolpyruvate carboxylase | 0.93 | 3 |
| Caulobacter crescentus NA1000 Δfur | 0.21 | CCNA_03721 | | glutamate synthase (NADPH) small chain GltD | 0.08 | CCNA_01560 | | phosphoenolpyruvate carboxylase | low | > 67 |
Not shown: 24 genomes with orthologs for Echvi_1243 only; 6 genomes with orthologs for Echvi_3727 only