Conservation of cofitness between ECD_00218 and ECD_02583 in Escherichia coli BL21

65 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00218 type 2 glutamine amidotransferase family protein 1.0 ECD_02583 methyl-directed mismatch repair protein 0.40 46
Escherichia coli BW25113 0.99 b0223 yafJ predicted amidotransfease (NCBI) 1.00 b2733 mutS DNA mismatch repair protein (NCBI) low > 76
Escherichia coli ECRC62 0.99 BNILDI_00335 yafJ Putative glutamine amidotransferase YafJ 1.00 BNILDI_10920 mutS DNA mismatch repair protein MutS low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_03416 Putative glutamine amidotransferase YafJ 1.00 OHPLBJKB_01000 DNA mismatch repair protein MutS low > 73
Escherichia coli ECOR38 0.99 HEPCGN_07875 yafJ Putative glutamine amidotransferase YafJ 0.99 HEPCGN_19705 mutS DNA mismatch repair protein MutS low > 87
Escherichia coli ECOR27 0.99 NOLOHH_02140 yafJ Putative glutamine amidotransferase YafJ 1.00 NOLOHH_12370 mutS DNA mismatch repair protein MutS low > 75
Escherichia fergusonii Becca 0.99 EFB2_03794 Putative glutamine amidotransferase YafJ 0.98 EFB2_01179 DNA mismatch repair protein MutS low > 86
Escherichia coli ECRC98 0.99 JDDGAC_13395 yafJ class II glutamine amidotransferase 1.00 JDDGAC_24190 mutS DNA mismatch repair protein MutS low > 86
Escherichia coli ECRC102 0.99 NIAGMN_07630 yafJ class II glutamine amidotransferase 1.00 NIAGMN_18295 mutS DNA mismatch repair protein MutS — —
Escherichia coli ECRC100 0.99 OKFHMN_09770 yafJ class II glutamine amidotransferase 1.00 OKFHMN_20525 mutS DNA mismatch repair protein MutS low > 80
Escherichia coli ECRC99 0.99 KEDOAH_18385 yafJ class II glutamine amidotransferase 1.00 KEDOAH_07610 mutS DNA mismatch repair protein MutS — —
Escherichia coli Nissle 1917 0.99 ECOLIN_RS01755 class II glutamine amidotransferase 0.99 ECOLIN_RS15275 DNA mismatch repair protein MutS low > 55
Escherichia coli ECRC101 0.99 MCAODC_00290 yafJ class II glutamine amidotransferase 1.00 MCAODC_11050 mutS DNA mismatch repair protein MutS low > 87
Enterobacter asburiae PDN3 0.95 EX28DRAFT_2666 Predicted glutamine amidotransferase 0.92 EX28DRAFT_2829 DNA mismatch repair protein MutS low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.95 GFF4102 Predicted glutamine amidotransferase 0.93 GFF4773 DNA mismatch repair protein MutS low > 78
Enterobacter sp. TBS_079 0.94 MPMX20_00912 Putative glutamine amidotransferase YafJ 0.92 MPMX20_03619 DNA mismatch repair protein MutS low > 85
Klebsiella michiganensis M5al 0.89 BWI76_RS05480 class II glutamine amidotransferase 0.92 BWI76_RS22600 DNA mismatch repair protein MutS low > 92
Erwinia tracheiphila SCR3 0.88 LU632_RS01140 class II glutamine amidotransferase 0.84 LU632_RS06485 mutS DNA mismatch repair protein MutS low > 74
Rahnella sp. WP5 0.86 EX31_RS21015 class II glutamine amidotransferase 0.84 EX31_RS07820 DNA mismatch repair protein MutS low > 89
Serratia liquefaciens MT49 0.86 IAI46_04345 class II glutamine amidotransferase 0.85 IAI46_03800 DNA mismatch repair protein MutS low > 86
Pantoea sp. MT58 0.85 IAI47_15185 class II glutamine amidotransferase 0.82 IAI47_04240 DNA mismatch repair protein MutS low > 76
Dickeya dadantii 3937 0.85 DDA3937_RS16585 class II glutamine amidotransferase 0.85 DDA3937_RS05230 DNA mismatch repair protein MutS low > 74
Pectobacterium carotovorum WPP14 0.85 HER17_RS04650 class II glutamine amidotransferase 0.84 HER17_RS16220 DNA mismatch repair protein MutS low > 75
Dickeya dianthicola ME23 0.84 DZA65_RS17745 class II glutamine amidotransferase 0.85 DZA65_RS05570 DNA mismatch repair protein MutS low > 75
Dickeya dianthicola 67-19 0.83 HGI48_RS16655 class II glutamine amidotransferase 0.85 HGI48_RS05230 DNA mismatch repair protein MutS 0.55 2
Vibrio cholerae E7946 ATCC 55056 0.73 CSW01_11360 class II glutamine amidotransferase 0.71 CSW01_02840 DNA mismatch repair protein MutS low > 62
Shewanella oneidensis MR-1 0.68 SO2535 hypothetical amidotransferase (NCBI ptt file) 0.65 SO3431 mutS DNA mismatch repair protein MutS (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.68 Sama_1869 amidotransferase (RefSeq) 0.65 Sama_1045 DNA mismatch repair protein MutS (RefSeq) low > 62
Shewanella sp. ANA-3 0.67 Shewana3_2322 glutamine amidotransferase, class-II (RefSeq) 0.67 Shewana3_1125 DNA mismatch repair protein MutS (RefSeq) low > 73
Shewanella loihica PV-4 0.67 Shew_2107 glutamine amidotransferase, class-II (RefSeq) 0.66 Shew_1214 DNA mismatch repair protein (RefSeq) — —
Azospirillum sp. SherDot2 0.66 MPMX19_00595 Putative glutamine amidotransferase YafJ 0.33 MPMX19_00908 DNA mismatch repair protein MutS low > 112
Azospirillum brasilense Sp245 0.64 AZOBR_RS05605 glutamine amidotransferase 0.33 AZOBR_RS02125 DNA mismatch repair protein MutS low > 97
Pseudomonas sp. S08-1 0.59 OH686_05255 Putative glutamine amidotransferase YafJ 0.57 OH686_18195 DNA mismatch repair protein MutS low > 80
Pseudomonas fluorescens SBW25-INTG 0.59 PFLU_RS07540 class II glutamine amidotransferase 0.57 PFLU_RS05765 DNA mismatch repair protein MutS low > 109
Pseudomonas fluorescens SBW25 0.59 PFLU_RS07540 class II glutamine amidotransferase 0.57 PFLU_RS05765 DNA mismatch repair protein MutS low > 109
Pseudomonas fluorescens GW456-L13 0.59 PfGW456L13_4482 Glutamine amidotransferase, class-II 0.57 PfGW456L13_4672 DNA mismatch repair protein MutS low > 87
Pseudomonas sp. RS175 0.59 PFR28_00725 Putative glutamine amidotransferase YafJ 0.58 PFR28_00429 DNA mismatch repair protein MutS low > 88
Pseudomonas fluorescens FW300-N2E2 0.59 Pf6N2E2_2711 Glutamine amidotransferase, class-II 0.58 Pf6N2E2_3035 DNA mismatch repair protein MutS low > 103
Pseudomonas fluorescens FW300-N2C3 0.59 AO356_04350 glutamine amidotransferase 0.58 AO356_05875 DNA mismatch repair protein MutS low > 104
Pseudomonas simiae WCS417 0.59 PS417_07455 glutamine amidotransferase 0.58 PS417_05680 DNA mismatch repair protein MutS low > 88
Pseudomonas fluorescens FW300-N2E3 0.59 AO353_17960 glutamine amidotransferase 0.57 AO353_16625 DNA mismatch repair protein MutS low > 101
Pseudomonas fluorescens FW300-N1B4 0.59 Pf1N1B4_3359 Glutamine amidotransferase, class-II 0.57 Pf1N1B4_3117 DNA mismatch repair protein MutS — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.58 Psyr_1576 Glutamine amidotransferase, class-II 0.57 Psyr_1376 DNA mismatch repair protein MutS low > 86
Pseudomonas syringae pv. syringae B728a 0.58 Psyr_1576 Glutamine amidotransferase, class-II 0.57 Psyr_1376 DNA mismatch repair protein MutS low > 86
Pseudomonas putida KT2440 0.57 PP_4581 putative amidotransferase 0.57 PP_1626 DNA mismatch repair protein MutS low > 96
Pseudomonas stutzeri RCH2 0.55 Psest_1849 Predicted glutamine amidotransferase 0.58 Psest_2875 DNA mismatch repair protein MutS low > 67
Marinobacter adhaerens HP15 0.55 HP15_3871 glutamine amidotransferase class-II 0.60 HP15_1047 DNA mismatch repair protein MutS low > 73
Dechlorosoma suillum PS 0.54 Dsui_1425 putative glutamine amidotransferase 0.49 Dsui_2244 DNA mismatch repair protein MutS low > 51
Paraburkholderia sabiae LMG 24235 0.52 QEN71_RS26860 class II glutamine amidotransferase 0.47 QEN71_RS06085 DNA mismatch repair protein MutS low > 153
Herbaspirillum seropedicae SmR1 0.52 HSERO_RS24040 glutamine amidotransferase 0.49 HSERO_RS16360 DNA mismatch repair protein MutS low > 78
Variovorax sp. OAS795 0.52 ABID97_RS04635 class II glutamine amidotransferase 0.43 ABID97_RS20815 DNA mismatch repair protein MutS low > 91
Paraburkholderia graminis OAS925 0.51 ABIE53_003506 putative glutamine amidotransferase 0.49 ABIE53_002719 DNA mismatch repair protein MutS low > 113
Paraburkholderia bryophila 376MFSha3.1 0.51 H281DRAFT_04266 glutamine amidotransferase 0.49 H281DRAFT_00537 DNA mismatch repair protein MutS low > 103
Acinetobacter radioresistens SK82 0.51 MPMX26_02412 Putative glutamine amidotransferase YafJ 0.47 MPMX26_01954 DNA mismatch repair protein MutS low > 36
Cupriavidus basilensis FW507-4G11 0.51 RR42_RS02595 glutamine amidotransferase 0.49 RR42_RS06285 DNA mismatch repair protein MutS low > 128
Ralstonia sp. UNC404CL21Col 0.50 ABZR87_RS07540 class II glutamine amidotransferase 0.49 ABZR87_RS10580 DNA mismatch repair protein MutS low > 80
Ralstonia solanacearum PSI07 0.50 RPSI07_RS21635 class II glutamine amidotransferase 0.49 RPSI07_RS18440 DNA mismatch repair protein MutS low > 81
Ralstonia solanacearum GMI1000 0.50 RS_RS02405 class II glutamine amidotransferase 0.49 RS_RS05735 DNA mismatch repair protein MutS low > 80
Ralstonia solanacearum IBSBF1503 0.50 RALBFv3_RS11575 class II glutamine amidotransferase 0.49 RALBFv3_RS14920 DNA mismatch repair protein MutS low > 76
Ralstonia solanacearum UW163 0.50 UW163_RS02010 class II glutamine amidotransferase 0.49 UW163_RS12390 DNA mismatch repair protein MutS — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.49 GFF3024 Glutamine amidotransferase, class-II 0.42 GFF3599 DNA mismatch repair protein MutS low > 90
Castellaniella sp019104865 MT123 0.49 ABCV34_RS06215 class II glutamine amidotransferase 0.44 ABCV34_RS00270 DNA mismatch repair protein MutS low > 48
Variovorax sp. SCN45 0.49 GFF6320 Putative glutamine amidotransferase YafJ 0.44 GFF6634 DNA mismatch repair protein MutS low > 127
Burkholderia phytofirmans PsJN 0.49 BPHYT_RS16680 glutamine amidotransferase 0.48 BPHYT_RS12475 DNA mismatch repair protein MutS low > 109
Synechococcus elongatus PCC 7942 0.46 Synpcc7942_2184 hypothetical protein 0.34 Synpcc7942_2247 mutS DNA mismatch repair protein low > 38
Rhizobium sp. OAE497 0.10 ABIE40_RS01490 class II glutamine amidotransferase 0.31 ABIE40_RS01775 DNA mismatch repair protein MutS low > 107

Not shown: 1 genomes with orthologs for ECD_00218 only; 34 genomes with orthologs for ECD_02583 only